SNORD5 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 5
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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Notably, however, none of these reports contain any evaluation or functional characterization of SNORD5, a small nucleolar RNA with recognized roles in RNA modification.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional studies (for instance"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "11"}]}, {"type": "t", "text": "further elaborate on the interplay between long non-coding RNAs and microRNAs in critical pathophysiological contexts such as myocardial infarction, trained immunity, and neural cell viability. These investigations underscore the importance of non-coding RNA networks in orchestrating signaling cascades and cellular homeostasis, yet they do not provide any data or discussion regarding SNORD5.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFinally, research focused on neurotoxicity, tissue remodeling, and immunological regulation (as shown in"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "12", "end_ref": "16"}]}, {"type": "t", "text": "continues to highlight the multifaceted regulatory roles of miR-9 (and its variants) in processes such as synaptic protein modulation, neural apoptosis, and hematopoietic as well as inflammatory pathways. In summary, while these studies collectively deepen our understanding of non-coding RNA regulatory networks, they do not address or elucidate any function for SNORD5. Consequently, the specific physiological and molecular roles of SNORD5 remain uncharacterized within the scope of this body of literature.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Shilong Wang, Chaoliang Tang, Quan Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Reduced miR-9 and miR-181a expression down-regulates Bim concentration and promote osteoclasts survival."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Clin Exp Pathol (2014)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24966929"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24966929"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Qian Xue, Caiyong Yu, Yan Wang, et al. 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Synonyms MGH28S-2410
NCBI Gene ID 692072
API
Download Associations
Predicted Functions View SNORD5's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD5's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD5's ARCHS4 Predicted Functions.

Functional Associations

SNORD5 has 555 functional associations with biological entities spanning 4 categories (molecular profile, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.

Click the + buttons to view associations for SNORD5 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD5 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD5 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD5 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD5 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD5 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of SNORD5 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of SNORD5 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD5 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD5 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of SNORD5 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of SNORD5 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of SNORD5 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD5 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.