| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, C/D box 52 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA review of the provided abstracts reveals that none of these studies directly mention or investigate SNORD52. In the broader literature, SNORD52 is classified as a small nucleolar RNA (snoRNA) that typically functions in the chemical modification (e.g., 2′‐O‐methylation) of ribosomal RNAs. However, the abstracts supplied here predominantly focus on genes encoding chromatin remodelers—most notably CHD8—and related factors that regulate neurodevelopment, cell proliferation, apoptosis, gene expression via chromatin remodeling, and signaling pathways (such as Wnt and p53), with strong implications for autism spectrum disorder and other neurodevelopmental conditions."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nSeveral of the abstracts delineate intricate molecular mechanisms by which CHD8 and associated chromatin‐remodeling factors regulate neural progenitor proliferation, synaptic function, apoptosis, and even myelination. They underscore how CHD8 modulates gene expression by interacting with transcriptional regulators (such as REST and histone H1) and how its haploinsufficiency can lead to widespread, albeit sometimes subtle, transcriptional alterations in the developing brain along with behavioral phenotypes relevant to autism. Notably, while these studies provide a detailed view of regulatory networks affecting neurodevelopment, they do not extend their scope to include the functions of small nucleolar RNAs like SNORD52."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "13", "end_ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, although SNORD52 itself is well known from other sources for its role in rRNA modification and maturation, none of the abstracts provided here offer experimental data or functional insights regarding SNORD52. The collective focus of these studies remains on chromatin remodeling factors (especially CHD8) and their impact on neurodevelopment and disease. Future dedicated research will be necessary to explore any potential connections or regulatory interactions between SNORD52 and the chromatin or neurodevelopmental pathways highlighted in these reports."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "21", "end_ref": "34"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Biaoyang Lin, James T White, Angelita G Utleg, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Mutations in mouse Ift144 model the craniofacial, limb and rib defects in skeletal ciliopathies."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddr613"}], "href": "https://doi.org/10.1093/hmg/ddr613"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22228095"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22228095"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Karel F Liem, Alyson Ashe, Mu He, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The IFT-A complex regulates Shh signaling through cilia structure and membrane protein trafficking."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.201110049"}], "href": "https://doi.org/10.1083/jcb.201110049"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22689656"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22689656"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Jennifer R Shingleton, Michael T Hemann "}, {"type": "b", "children": [{"type": "t", "text": "The Chromatin Regulator CHD8 Is a Context-Dependent Mediator of Cell Survival in Murine Hematopoietic Malignancies."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0143275"}], "href": "https://doi.org/10.1371/journal.pone.0143275"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26588464"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26588464"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Yuta Katayama, Masaaki Nishiyama, Hirotaka Shoji, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Germline Chd8 haploinsufficiency alters brain development in mouse."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Neurosci (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nn.4592"}], "href": "https://doi.org/10.1038/nn.4592"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28671691"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28671691"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Mihiro Shibutani, Takuro Horii, Hirotaka Shoji, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Arid1b Haploinsufficiency Causes Abnormal Brain Gene Expression and Autism-Related Behaviors in Mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms18091872"}], "href": "https://doi.org/10.3390/ijms18091872"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28867767"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28867767"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Philipp Suetterlin, Shaun Hurley, Conor Mohan, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Calpain 9 as a therapeutic target in TGFβ-induced mesenchymal transition and fibrosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Transl Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/scitranslmed.aau2814"}], "href": "https://doi.org/10.1126/scitranslmed.aau2814"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31316008"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31316008"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Atsuki Kawamura, Yuta Katayama, Masaaki Nishiyama, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Chd8 mutation in oligodendrocytes alters microstructure and functional connectivity in the mouse brain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Brain (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13041-020-00699-x"}], "href": "https://doi.org/10.1186/s13041-020-00699-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33228730"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33228730"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Akihiro Nita, Yoshiharu Muto, Yuta Katayama, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Chd8 regulates X chromosome inactivation in mouse through fine-tuning control of Xist expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Commun Biol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s42003-021-01945-1"}], "href": "https://doi.org/10.1038/s42003-021-01945-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33859315"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33859315"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Stanislav M Cherepanov, Maria Gerasimenko, Teruko Yuhi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Oxytocin ameliorates impaired social behavior in a Chd8 haploinsufficiency mouse model of autism."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Neurosci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12868-021-00631-6"}], "href": "https://doi.org/10.1186/s12868-021-00631-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33933000"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33933000"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Zhaowei Tu, Chen Wang, Ashley K Davis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The chromatin remodeler CHD8 governs hematopoietic stem/progenitor survival by regulating ATM-mediated P53 protein stability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood.2020009997"}], "href": "https://doi.org/10.1182/blood.2020009997"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34292326"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34292326"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Yuta Takanezawa, Shogo Tanabe, Daiki Kato, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Microglial ASD-related genes are involved in oligodendrocyte differentiation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-021-97257-9"}], "href": "https://doi.org/10.1038/s41598-021-97257-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34497307"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34497307"}]}, {"type": "r", "ref": 27, "children": [{"type": "t", "text": "Xiang Chen, Tong Chen, Chen Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deletion of CHD8 in cerebellar granule neuron progenitors leads to severe cerebellar hypoplasia, ataxia, and psychiatric behavior in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Genet Genomics (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jgg.2022.02.011"}], "href": "https://doi.org/10.1016/j.jgg.2022.02.011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35231638"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35231638"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Zhaowei Tu, Cuiqing Fan, Ashely K Davis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Autism-associated chromatin remodeler CHD8 regulates erythroblast cytokinesis and fine-tunes the balance of Rho GTPase signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2022.111072"}], "href": "https://doi.org/10.1016/j.celrep.2022.111072"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35830790"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35830790"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Chen Dong, Chuntao Zhao, Xiang Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Conserved and Distinct Functions of the Autism-Related Chromatin Remodeler CHD8 in Embryonic and Adult Forebrain Neurogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.2400-21.2022"}], "href": "https://doi.org/10.1523/JNEUROSCI.2400-21.2022"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36127134"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36127134"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "Atsuki Kawamura, Masaaki Nishiyama "}, {"type": "b", "children": [{"type": "t", "text": "Deletion of the autism-related gene Chd8 alters activity-dependent transcriptional responses in mouse postmitotic neurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Commun Biol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s42003-023-04968-y"}], "href": "https://doi.org/10.1038/s42003-023-04968-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37268684"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37268684"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Ipsita Chatterjee, Dmitriy Getselter, Nasreen Ghanayem, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CHD8 regulates gut epithelial cell function and affects autism-related behaviors through the gut-brain axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Transl Psychiatry (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41398-023-02611-2"}], "href": "https://doi.org/10.1038/s41398-023-02611-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37783686"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37783686"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Xi Shi, Congyi Lu, Alba Corman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Heterozygous deletion of the autism-associated gene CHD8 impairs synaptic function through widespread changes in gene expression and chromatin compaction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Hum Genet (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ajhg.2023.09.004"}], "href": "https://doi.org/10.1016/j.ajhg.2023.09.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37802044"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37802044"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "Robert A Ellingford, Mizuki Tojo, M Albert Basson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Male-Dominant Effects of Chd8 Haploinsufficiency on Synaptic Phenotypes during Development in Mouse Prefrontal Cortex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "ACS Chem Neurosci (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/acschemneuro.3c00690"}], "href": "https://doi.org/10.1021/acschemneuro.3c00690"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38557009"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38557009"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "Manal Tabbaa, Pat Levitt "}, {"type": "b", "children": [{"type": "t", "text": "Chd8 haploinsufficiency impacts rearing experience in C57BL/6 mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Brain Behav (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/gbb.12892"}], "href": "https://doi.org/10.1111/gbb.12892"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38560770"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38560770"}]}]}]}
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| Synonyms | RNU52, U52 |
| NCBI Gene ID | 26797 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORD52 has 1,276 functional associations with biological entities spanning 6 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 19 datasets.
Click the + buttons to view associations for SNORD52 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD52 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD52 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SNORD52 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores | cellular components co-occuring with SNORD52 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD52 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD52 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD52 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORD52 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing SNORD52 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GAD Gene-Disease Associations | diseases associated with SNORD52 gene in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of SNORD52 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SNORD52 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SNORD52 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD52 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of SNORD52 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of SNORD52 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SNORD52 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD52 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with SNORD52 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |