| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, C/D box 96B |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nHOOK1 is a microtubule‐binding protein that plays a critical role in male germ cell development. In mice, loss‐of-function mutations affecting HOOK1 lead to drastic abnormalities in sperm morphology, including malformed heads and flagellar defects arising from disorganized microtubular structures such as the manchette. Such studies demonstrate that HOOK1 is integral to linking microtubular elements to the developing sperm cell’s architecture, implicating it as a candidate for human male infertility associated with teratozoospermia or decapitation defects."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its role in spermatogenesis, HOOK1 functions as an adaptor protein in intracellular transport. It interacts with key components such as the cytoplasmic dynein motor and dynactin to promote efficient minus end-directed movement of organelles and vesicles along microtubules. Experiments using optogenetic recruitment and single-molecule assays reveal that HOOK1, as well as its homologs, activates dynein more effectively than other known dynein activators, and its interaction with proteins like Ankyrin G further suggests a broader role in organizing and positioning membrane-associated complexes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its established functions in cellular transport and sperm development, altered HOOK1 expression is emerging as a factor in other pathological contexts. For instance, variations in HOOK1 expression have been reported in ovarian tumors, hinting at a potential involvement in cancer stem cell regulation and tumor initiation. Moreover, studies involving the cryopreservation and assisted reproductive use of sperm from HOOK1-deficient models underscore the protein’s importance in maintaining sperm integrity during stress, thereby linking its proper function to both reproductive success and cellular homeostasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Irene Mendoza-Lujambio, Peter Burfeind, Christa Dixkens, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Hook1 gene is non-functional in the abnormal spermatozoon head shape (azh) mutant mouse."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/11.14.1647"}], "href": "https://doi.org/10.1093/hmg/11.14.1647"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12075009"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12075009"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Thomas Schwarz, Barbara Prieler, Johannes A Schmid, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ccdc181 is a microtubule-binding protein that interacts with Hook1 in haploid male germ cells and localizes to the sperm tail and motile cilia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur J Cell Biol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ejcb.2017.02.003"}], "href": "https://doi.org/10.1016/j.ejcb.2017.02.003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28283191"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28283191"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yasuhiro Yamauchi, Monika A Ward "}, {"type": "b", "children": [{"type": "t", "text": "Preservation of ejaculated mouse spermatozoa from fertile C57BL/6 and infertile Hook1/Hook1 mice collected from the uteri of mated females."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Reprod (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1095/biolreprod.106.059881"}], "href": "https://doi.org/10.1095/biolreprod.106.059881"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17314312"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17314312"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Mara A Olenick, Mariko Tokito, Malgorzata Boczkowska, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hook Adaptors Induce Unidirectional Processive Motility by Enhancing the Dynein-Dynactin Interaction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M116.738211"}], "href": "https://doi.org/10.1074/jbc.M116.738211"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27365401"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27365401"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Jill M Weimer, Subrata Chattopadhyay, Andrew W Custer, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Elevation of Hook1 in a disease model of Batten disease does not affect a novel interaction between Ankyrin G and Hook1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2005.03.103"}], "href": "https://doi.org/10.1016/j.bbrc.2005.03.103"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15823567"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15823567"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Elisa Suárez-Martínez, Sander R Piersma, Thang V Pham, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Protein homeostasis maintained by HOOK1 levels promotes the tumorigenic and stemness properties of ovarian cancer cells through reticulum stress and autophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Clin Cancer Res (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13046-024-03071-2"}], "href": "https://doi.org/10.1186/s13046-024-03071-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38807192"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38807192"}]}]}]}
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| Synonyms | U96B |
| NCBI Gene ID | 692226 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORD96B has 233 functional associations with biological entities spanning 4 categories (molecular profile, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.
Click the + buttons to view associations for SNORD96B from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD96B gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD96B gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SNORD96B gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD96B gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD96B gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD96B gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORD96B gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SNORD96B gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD96B gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of SNORD96B gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SNORD96B gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD96B gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |