SPANXA2-OT1 Gene

Name SPANXA2 overlapping transcript 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough the query specifically asks for a summary of SPANXA2-OT1 function, none of the provided abstracts mention or characterize SPANXA2-OT1. Instead, these studies focus on dissecting the roles of heterotrimeric G‐protein subunits in various physiological contexts. In several investigations, distinct G‑protein β and γ isoforms have been shown to contribute to receptor signaling in retinal cells as well as in systemic metabolic and cardiovascular regulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn studies examining retinal function, one report demonstrated that Gγ13, together with selective Gβ subunits (notably Gβ3 and Gβ4), is preferentially expressed in ON bipolar cells where it colocalizes with metabotropic receptor components to mediate light‐induced signaling. Complementary work showed that deletion of Gβ3 leads to a diminished light response, mislocalization and downregulation of key cascade proteins, and even alterations in synaptic connectivity, thereby highlighting the importance of precise G‑protein subunit expression for robust phototransduction."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther investigations have extended the role of these G‑protein subunits beyond the retina. One study linked the duplication and consequent overexpression of the GNB3 gene to a syndrome marked by obesity, macrocephaly, intellectual disability, and seizures, while a separate analysis of GNB3‐null mice revealed effects on heart rate regulation without pronounced metabolic or blood pressure abnormalities. These findings collectively underscore the broader significance of G‑protein β subunit composition in systemic physiology, even though SPANXA2-OT1 remains unaddressed in these reports."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Liquan Huang, Marianna Max, Robert F Margolskee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "G protein subunit G gamma 13 is coexpressed with G alpha o, G beta 3, and G beta 4 in retinal ON bipolar cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Comp Neurol (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/cne.10396"}], "href": "https://doi.org/10.1002/cne.10396"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12454992"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12454992"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Anuradha Dhingra, Hariharasubramanian Ramakrishnan, Adam Neinstein, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Gβ3 is required for normal light ON responses and synaptic maintenance."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.1436-12.2012"}], "href": "https://doi.org/10.1523/JNEUROSCI.1436-12.2012"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22895717"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22895717"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Sergei S Nikonov, Arkady Lyubarsky, Marie E Fina, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cones respond to light in the absence of transducin β subunit."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.5204-12.2013"}], "href": "https://doi.org/10.1523/JNEUROSCI.5204-12.2013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23516284"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23516284"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Ian S Goldlust, Karen E Hermetz, Lisa M Catalano, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mouse model implicates GNB3 duplication in a childhood obesity syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1305999110"}], "href": "https://doi.org/10.1073/pnas.1305999110"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23980137"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23980137"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Yuanchao Ye, Zhizeng Sun, Ang Guo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ablation of the GNB3 gene in mice does not affect body weight, metabolism or blood pressure, but causes bradycardia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Signal (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cellsig.2014.07.030"}], "href": "https://doi.org/10.1016/j.cellsig.2014.07.030"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25093805"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25093805"}]}]}]}
Synonyms CXORF18
Proteins SPOT1_HUMAN
NCBI Gene ID 619455
API
Download Associations
Predicted Functions View SPANXA2-OT1's ARCHS4 Predicted Functions.
Co-expressed Genes View SPANXA2-OT1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SPANXA2-OT1's ARCHS4 Predicted Functions.

Functional Associations

SPANXA2-OT1 has 365 functional associations with biological entities spanning 6 categories (molecular profile, organism, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 17 datasets.

Click the + buttons to view associations for SPANXA2-OT1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of SPANXA2-OT1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of SPANXA2-OT1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SPANXA2-OT1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of SPANXA2-OT1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with SPANXA2-OT1 gene from the CellMarker Gene-Cell Type Associations dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SPANXA2-OT1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SPANXA2-OT1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SPANXA2-OT1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of SPANXA2-OT1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of SPANXA2-OT1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of SPANXA2-OT1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of SPANXA2-OT1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of SPANXA2-OT1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SPANXA2-OT1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SPANXA2-OT1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain SPANXA2-OT1 protein from the LOCATE Predicted Protein Localization Annotations dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of SPANXA2-OT1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.