| Name | SPEM family member 2 |
| Description | Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nMEX3A is an RNA‐binding protein that plays a pivotal role in the regulation of stem cell dynamics. In the intestinal epithelium, MEX3A marks a slowly cycling subpopulation of Lgr5+ stem cells that serve as a reserve pool, contributing to tissue regeneration after cytotoxic insults. These cells, characterized by a unique expression program and lower proliferation gene levels, can replenish the rapidly dividing stem cell compartment during homeostasis and after chemotherapy or radiation, thereby safeguarding epithelial integrity. This function is underscored by mouse model studies in which loss of MEX3A disrupts epithelial turnover and organoid maturation via modulation of key pathways such as Wnt and PPAR signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the realm of cancer biology, heightened MEX3A levels have been implicated in tumor progression and therapy resistance. In pancreatic ductal adenocarcinoma, for example, upregulation of MEX3A correlates with advanced disease stage and chemoresistance through its ability to stabilize pro-proliferative transcripts such as cyclin‐dependent kinase 6, thus promoting cell cycle progression. Similarly, in colorectal cancer, the E2F3-MEX3A-KLF4 axis is critical in maintaining cancer cells in a proliferative and undifferentiated state, contributing to radioresistance and poorer patient prognosis. These findings highlight the dual role of MEX3A in sustaining stem cell features in normal tissue as well as hijacking these mechanisms in cancer to support malignancy."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "3", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond the intestinal context, MEX3A exerts essential regulatory roles in other stem cell systems. In the adult murine neural stem cell niche, for instance, MEX3A modulates a specific repertoire of stemness-associated transcripts, ensuring that activated neural stem cells can return to quiescence and thereby maintain long-term self-renewal and proper neuronal differentiation. Moreover, emerging evidence in breast cancer further suggests that MEX3A contributes to tumor genesis and progression, although its detailed mechanistic contributions in this setting remain to be fully elucidated."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Francisco M Barriga, Elisa Montagni, Miyeko Mana, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mex3a Marks a Slowly Dividing Subpopulation of Lgr5+ Intestinal Stem Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Stem Cell (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.stem.2017.02.007"}], "href": "https://doi.org/10.1016/j.stem.2017.02.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28285904"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28285904"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Bruno Pereira, Ana L Amaral, Alexandre Dias, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MEX3A regulates Lgr5"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "+"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "t", "text": " stem cell maintenance in the developing intestinal epithelium."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Rep (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/embr.201948938"}], "href": "https://doi.org/10.15252/embr.201948938"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32052574"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32052574"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Valentina Panzeri, Isabella Manni, Alessia Capone, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The RNA-binding protein MEX3A is a prognostic factor and regulator of resistance to gemcitabine in pancreatic ductal adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/1878-0261.12847"}], "href": "https://doi.org/10.1002/1878-0261.12847"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33159833"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33159833"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Haixia Li, Jinghui Liang, Jiang Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mex3a promotes oncogenesis through the RAP1/MAPK signaling pathway in colorectal cancer and is inhibited by hsa-miR-6887-3p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Commun (Lond) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/cac2.12149"}], "href": "https://doi.org/10.1002/cac2.12149"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33638620"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33638620"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Xu Yang, Guilin Li, Yuhua Tian, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identifying the E2F3-MEX3A-KLF4 signaling axis that sustains cancer cells in undifferentiated and proliferative state."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Theranostics (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/thno.76619"}], "href": "https://doi.org/10.7150/thno.76619"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36276637"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36276637"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Ana Domingo-Muelas, Pere Duart-Abadia, Jose Manuel Morante-Redolat, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Post-transcriptional control of a stemness signature by RNA-binding protein MEX3A regulates murine adult neurogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-023-36054-6"}], "href": "https://doi.org/10.1038/s41467-023-36054-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36690670"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36690670"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Wenhu Chen, Liqiang Hu, Xuemei Lu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The RNA binding protein MEX3A promotes tumor progression of breast cancer by post-transcriptional regulation of IGFBP4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Breast Cancer Res Treat (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10549-023-07028-5"}], "href": "https://doi.org/10.1007/s10549-023-07028-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37433992"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37433992"}]}]}]}
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| NCBI Gene ID | 201243 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SPEM2 has 411 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 16 datasets.
Click the + buttons to view associations for SPEM2 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SPEM2 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of SPEM2 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with SPEM2 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores 2025 | diseases associated with SPEM2 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with SPEM2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of SPEM2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with SPEM2 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of SPEM2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of SPEM2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of SPEM2 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of SPEM2 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of SPEM2 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of SPEM2 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of SPEM2 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of SPEM2 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with SPEM2 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |