| Name | TAR (HIV-1) RNA binding protein 2 |
| Description | HIV-1, the causative agent of acquired immunodeficiency syndrome (AIDS), contains an RNA genome that produces a chromosomally integrated DNA during the replicative cycle. Activation of HIV-1 gene expression by the transactivator Tat is dependent on an RNA regulatory element (TAR) located downstream of the transcription initiation site. The protein encoded by this gene binds between the bulge and the loop of the HIV-1 TAR RNA regulatory element and activates HIV-1 gene expression in synergy with the viral Tat protein. Alternative splicing results in multiple transcript variants encoding different isoforms. This gene also has a pseudogene. [provided by RefSeq, Jul 2008] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nTRBP (TAR‐binding protein 2) plays a central role in the canonical RNA interference pathway by acting as an essential cofactor in the RISC‐loading complex. It partners with Dicer and Argonaute proteins to facilitate the precise cleavage of double‐stranded precursor microRNAs and the subsequent selection of the correct guide strand. Structural and biochemical studies have revealed that TRBP uses its multiple double‐stranded RNA binding domains to recognize and bind both pre‐miRNAs and siRNAs, thereby promoting efficient maturation and strand transfer‐to‐Ago complexes. These investigations have also underscored its ability to interact directly with Dicer, modulate pre‐miRNA processing fidelity, and even influence steroid receptor–mediated transcription through its association with nuclear factors."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its core role in miRNA biogenesis, TRBP modulates the precision and efficiency of RNA processing. It influences the cleavage kinetics of pre‐miRNAs, alters the production of length‐variant (isomiR) species, and undergoes post‐translational modifications—such as phosphorylation and SUMOylation—that fine‐tune its activity. These regulatory mechanisms, in turn, impact the effective loading of mature miRNAs into Argonaute proteins and consequently determine the potency of gene silencing."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "15", "end_ref": "17"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its functions in RNA silencing, TRBP interfaces with multiple cellular signaling networks that influence antiviral responses and tumor biology. By inhibiting the activation of protein kinase R (PKR) and modulating innate immune signaling (including interactions that affect RIG‐I and interferon regulatory factors), TRBP contributes to the regulation of virus–host dynamics and the suppression of antiviral cytokine production. Moreover, altered TRBP expression or mutation is linked to diverse malignancies where it can affect oncogene regulation, modulate mRNA stability of key growth regulators, and even establish feedback loops with specific microRNAs that govern cancer stem cell properties and metastatic potential. Through interactions with partners such as PACT, merlin, and LGP2, as well as through its impact on downstream effectors in tumor and antiviral signaling pathways, TRBP emerges as a versatile regulator of cellular homeostasis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "18", "end_ref": "43"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ian J MacRae, Enbo Ma, Min Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "In vitro reconstitution of the human RISC-loading complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0710869105"}], "href": "https://doi.org/10.1073/pnas.0710869105"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18178619"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18178619"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Kin Hang Kok, Ming-Him James Ng, Yick-Pang Ching, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Human TRBP and PACT directly interact with each other and associate with dicer to facilitate the production of small interfering RNA."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M611768200"}], "href": "https://doi.org/10.1074/jbc.M611768200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17452327"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17452327"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hong-Wei Wang, Cameron Noland, Bunpote Siridechadilok, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structural insights into RNA processing by the human RISC-loading complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Struct Mol Biol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nsmb.1673"}], "href": "https://doi.org/10.1038/nsmb.1673"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19820710"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19820710"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Sylvanne M Daniels, Carlos E Melendez-Peña, Robert J Scarborough, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Characterization of the TRBP domain required for dicer interaction and function in RNA interference."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Mol Biol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1471-2199-10-38"}], "href": "https://doi.org/10.1186/1471-2199-10-38"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19422693"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19422693"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Ho Young Lee, Jennifer A Doudna "}, {"type": "b", "children": [{"type": "t", "text": "TRBP alters human precursor microRNA processing in vitro."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "RNA (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1261/rna.035501.112"}], "href": "https://doi.org/10.1261/rna.035501.112"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23006623"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23006623"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Edyta Koscianska, Julia Starega-Roslan, Wlodzimierz J Krzyzosiak "}, {"type": "b", "children": [{"type": "t", "text": "The role of Dicer protein partners in the processing of microRNA precursors."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0028548"}], "href": "https://doi.org/10.1371/journal.pone.0028548"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22163034"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22163034"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Michael Sand, Marina Skrygan, Dimitrios Georgas, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression levels of the microRNA maturing microprocessor complex component DGCR8 and the RNA-induced silencing complex (RISC) components argonaute-1, argonaute-2, PACT, TARBP1, and TARBP2 in epithelial skin cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Carcinog (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/mc.20861"}], "href": "https://doi.org/10.1002/mc.20861"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22025453"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22025453"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Ross C Wilson, Akshay Tambe, Mary Anne Kidwell, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dicer-TRBP complex formation ensures accurate mammalian microRNA biogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2014.11.030"}], "href": "https://doi.org/10.1016/j.molcel.2014.11.030"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25557550"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25557550"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Seisuke Yamashita, Takashi Nagata, Masahito Kawazoe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structures of the first and second double-stranded RNA-binding domains of human TAR RNA-binding protein."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Protein Sci (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/pro.543"}], "href": "https://doi.org/10.1002/pro.543"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21080422"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21080422"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Chao Zhang, Adam Huys, Patricia A Thibault, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Requirements for human Dicer and TRBP in microRNA-122 regulation of HCV translation and RNA abundance."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Virology (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.virol.2012.08.039"}], "href": "https://doi.org/10.1016/j.virol.2012.08.039"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22999255"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22999255"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Hye Ran Koh, Mary Anne Kidwell, Kaushik Ragunathan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ATP-independent diffusion of double-stranded RNA binding proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1212917110"}], "href": "https://doi.org/10.1073/pnas.1212917110"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23251028"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23251028"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Pick-Wei Lau, Clinton S Potter, Bridget Carragher, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Structure of the human Dicer-TRBP complex by electron microscopy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Structure (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.str.2009.08.013"}], "href": "https://doi.org/10.1016/j.str.2009.08.013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19836333"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19836333"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Greg S Parker, Tuhin Subhra Maity, Brenda L Bass "}, {"type": "b", "children": [{"type": "t", "text": "dsRNA binding properties of RDE-4 and TRBP reflect their distinct roles in RNAi."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Biol (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jmb.2008.10.002"}], "href": "https://doi.org/10.1016/j.jmb.2008.10.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18948111"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18948111"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Andrew D Redfern, Shane M Colley, Dianne J Beveridge, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RNA-induced silencing complex (RISC) Proteins PACT, TRBP, and Dicer are SRA binding nuclear receptor coregulators."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1301620110"}], "href": "https://doi.org/10.1073/pnas.1301620110"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23550157"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23550157"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Ho Young Lee, Kaihong Zhou, Alison Marie Smith, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential roles of human Dicer-binding proteins TRBP and PACT in small RNA processing."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkt361"}], "href": "https://doi.org/10.1093/nar/gkt361"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23661684"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23661684"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Yoosik Kim, Jinah Yeo, Jung Hyun Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deletion of human tarbp2 reveals cellular microRNA targets and cell-cycle function of TRBP."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2014.09.039"}], "href": "https://doi.org/10.1016/j.celrep.2014.09.039"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25437560"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25437560"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Cheng Chen, Changhong Zhu, Jian Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SUMOylation of TARBP2 regulates miRNA/siRNA efficiency."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms9899"}], "href": "https://doi.org/10.1038/ncomms9899"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26582366"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26582366"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Yohei Horikawa, Christopher G Wood, Hushan Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Single nucleotide polymorphisms of microRNA machinery genes modify the risk of renal cell carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Cancer Res (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1078-0432.CCR-08-1199"}], "href": "https://doi.org/10.1158/1078-0432.CCR-08-1199"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19047128"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19047128"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Aïcha Daher, Ghislaine Laraki, Madhurima Singh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TRBP control of PACT-induced phosphorylation of protein kinase R is reversed by stress."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Biol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MCB.01030-08"}], "href": "https://doi.org/10.1128/MCB.01030-08"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18936160"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18936160"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "V Boni, R Zarate, J C Villa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role of primary miRNA polymorphic variants in metastatic colon cancer patients treated with 5-fluorouracil and irinotecan."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pharmacogenomics J (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/tpj.2010.58"}], "href": "https://doi.org/10.1038/tpj.2010.58"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20585341"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20585341"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Claudio De Vito, Nicolo Riggi, Sandrine Cornaz, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A TARBP2-dependent miRNA expression profile underlies cancer stem cell properties and provides candidate therapeutic reagents in Ewing sarcoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ccr.2012.04.023"}], "href": "https://doi.org/10.1016/j.ccr.2012.04.023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22698405"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22698405"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "J-M Liao, X Zhou, A Gatignol, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ribosomal proteins L5 and L11 co-operatively inactivate c-Myc via RNA-induced silencing complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2013.430"}], "href": "https://doi.org/10.1038/onc.2013.430"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24141778"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24141778"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Sylvanne M Daniels, Anne Gatignol "}, {"type": "b", "children": [{"type": "t", "text": "The multiple functions of TRBP, at the hub of cell responses to viruses, stress, and cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Microbiol Mol Biol Rev (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/MMBR.00012-12"}], "href": "https://doi.org/10.1128/MMBR.00012-12"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22933564"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22933564"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Hani Goodarzi, Steven Zhang, Colin G Buss, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Metastasis-suppressor transcript destabilization through TARBP2 binding of mRNA hairpins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature13466"}], "href": "https://doi.org/10.1038/nature13466"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25043050"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25043050"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Joo Yong Lee, Hongtae Kim, Chung Hun Ryu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Merlin, a tumor suppressor, interacts with transactivation-responsive RNA-binding protein and inhibits its oncogenic activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M312083200"}], "href": "https://doi.org/10.1074/jbc.M312083200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15123692"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15123692"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Lisa Fish, Albertas Navickas, Bruce Culbertson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Nuclear TARBP2 Drives Oncogenic Dysregulation of RNA Splicing and Decay."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2019.06.001"}], "href": "https://doi.org/10.1016/j.molcel.2019.06.001"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31300274"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31300274"}]}, {"type": "r", "ref": 27, "children": [{"type": "t", "text": "Helen S Christensen, Aïcha Daher, Kaitlin J Soye, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Small interfering RNAs against the TAR RNA binding protein, TRBP, a Dicer cofactor, inhibit human immunodeficiency virus type 1 long terminal repeat expression and viral production."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Virol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/JVI.01511-06"}], "href": "https://doi.org/10.1128/JVI.01511-06"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17360756"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17360756"}]}, {"type": "r", "ref": 28, "children": [{"type": "t", "text": "Elissa H Wilker, Andrea Baccarelli, Helen Suh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Black carbon exposures, blood pressure, and interactions with single nucleotide polymorphisms in MicroRNA processing genes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Environ Health Perspect (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1289/ehp.0901440"}], "href": "https://doi.org/10.1289/ehp.0901440"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20211803"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20211803"}]}, {"type": "r", "ref": 29, "children": [{"type": "t", "text": "Madhurima Singh, David Castillo, Chandrashekhar V Patel, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Stress-induced phosphorylation of PACT reduces its interaction with TRBP and leads to PKR activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochemistry (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/bi200104h"}], "href": "https://doi.org/10.1021/bi200104h"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21526770"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21526770"}]}, {"type": "r", "ref": 30, "children": [{"type": "t", "text": "Stefano Caramuta, Linkiat Lee, Deniz M Ozata, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Clinical and functional impact of TARBP2 over-expression in adrenocortical carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Endocr Relat Cancer (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1530/ERC-13-0098"}], "href": "https://doi.org/10.1530/ERC-13-0098"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23671264"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23671264"}]}, {"type": "r", "ref": 31, "children": [{"type": "t", "text": "Tomoko Takahashi, Yuko Nakano, Koji Onomoto, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LGP2 virus sensor regulates gene expression network mediated by TRBP-bound microRNAs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gky575"}], "href": "https://doi.org/10.1093/nar/gky575"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29939295"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29939295"}]}, {"type": "r", "ref": 32, "children": [{"type": "t", "text": "Evelyn Chukwurah, Rekha C Patel "}, {"type": "b", "children": [{"type": "t", "text": "Stress-induced TRBP phosphorylation enhances its interaction with PKR to regulate cellular survival."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-018-19360-8"}], "href": "https://doi.org/10.1038/s41598-018-19360-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29348664"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29348664"}]}, {"type": "r", "ref": 33, "children": [{"type": "t", "text": "Sylvie Bannwarth, Sébastien Lainé, Aïcha Daher, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cell-specific regulation of TRBP1 promoter by NF-Y transcription factor in lymphocytes and astrocytes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Biol (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jmb.2005.11.026"}], "href": "https://doi.org/10.1016/j.jmb.2005.11.026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16343534"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16343534"}]}, {"type": "r", "ref": 34, "children": [{"type": "t", "text": "Guangnan Chen, Huijie Gu, Tingting Fang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hypoxia-induced let-7f-5p/TARBP2 feedback loop regulates osteosarcoma cell proliferation and invasion by inhibiting the Wnt signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.103049"}], "href": "https://doi.org/10.18632/aging.103049"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32305960"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32305960"}]}, {"type": "r", "ref": 35, "children": [{"type": "t", "text": "Ting Ling, Sheng-Na Li, Guang-Xiu Weng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TARBP2 negatively regulates IFN-β production and innate antiviral response by targeting MAVS."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Immunol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molimm.2018.10.017"}], "href": "https://doi.org/10.1016/j.molimm.2018.10.017"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30390472"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30390472"}]}, {"type": "r", "ref": 36, "children": [{"type": "t", "text": "Li Zhu, Suresh K Kandasamy, Ryuya Fukunaga "}, {"type": "b", "children": [{"type": "t", "text": "Dicer partner protein tunes the length of miRNAs using base-mismatch in the pre-miRNA stem."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gky043"}], "href": "https://doi.org/10.1093/nar/gky043"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29373753"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29373753"}]}, {"type": "r", "ref": 37, "children": [{"type": "t", "text": "Shuting Bai, Amberly L Nunez, Shi Wei, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Microsatellite instability and TARBP2 mutation study in upper urinary tract urothelial carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Clin Pathol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1309/AJCPBSLP8XHSWLOW"}], "href": "https://doi.org/10.1309/AJCPBSLP8XHSWLOW"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23690119"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23690119"}]}, {"type": "r", "ref": 38, "children": [{"type": "t", "text": "Matthew J Warner, Katherine S Bridge, James P Hewitson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "S6K2-mediated regulation of TRBP as a determinant of miRNA expression in human primary lymphatic endothelial cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkw631"}], "href": "https://doi.org/10.1093/nar/gkw631"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27407113"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27407113"}]}, {"type": "r", "ref": 39, "children": [{"type": "t", "text": "Xiaoti Lin, Minqing Wu, Peng Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Up-regulation and worse prognostic marker of cytoplasmic TARBP2 expression in obstinate breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Med Oncol (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12032-014-0868-9"}], "href": "https://doi.org/10.1007/s12032-014-0868-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24563327"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24563327"}]}, {"type": "r", "ref": 40, "children": [{"type": "t", "text": "Sylvanne M Daniels, Lucile Sinck, Natalie J Ward, et al. "}, {"type": "b", "children": [{"type": "t", "text": "HIV-1 RRE RNA acts as an RNA silencing suppressor by competing with TRBP-bound siRNAs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "RNA Biol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15476286.2015.1014759"}], "href": "https://doi.org/10.1080/15476286.2015.1014759"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25668122"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25668122"}]}, {"type": "r", "ref": 41, "children": [{"type": "t", "text": "Lauren S Vaughn, Evelyn Chukwurah, Rekha C Patel "}, {"type": "b", "children": [{"type": "t", "text": "Opposite actions of two dsRNA-binding proteins PACT and TRBP on RIG-I mediated signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem J (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BCJ20200987"}], "href": "https://doi.org/10.1042/BCJ20200987"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33459340"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33459340"}]}, {"type": "r", "ref": 42, "children": [{"type": "t", "text": "Hui-Huang Lai, Chih-Wei Li, Chih-Chen Hong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TARBP2-mediated destabilization of Nanog overcomes sorafenib resistance in hepatocellular carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Oncol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/1878-0261.12449"}], "href": "https://doi.org/10.1002/1878-0261.12449"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30657254"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30657254"}]}, {"type": "r", "ref": 43, "children": [{"type": "t", "text": "Tomoko Takahashi, Yuko Nakano, Koji Onomoto, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LGP2 virus sensor enhances apoptosis by upregulating apoptosis regulatory genes through TRBP-bound miRNAs during viral infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkz1143"}], "href": "https://doi.org/10.1093/nar/gkz1143"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31799626"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31799626"}]}]}]}
|
| Synonyms | LOQS, TRBP1, TRBP, TRBP2 |
| Proteins | TRBP2_HUMAN |
| NCBI Gene ID | 6895 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
TARBP2 has 6,334 functional associations with biological entities spanning 8 categories (molecular profile, organism, chemical, functional term, phrase or reference, disease, phenotype or trait, structural feature, cell line, cell type or tissue, gene, protein or microRNA) extracted from 113 datasets.
Click the + buttons to view associations for TARBP2 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of TARBP2 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles | tissues with high or low expression of TARBP2 gene relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of TARBP2 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray | tissue samples with high or low expression of TARBP2 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray dataset. | |
| Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq | tissue samples with high or low expression of TARBP2 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of TARBP2 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| BioGPS Cell Line Gene Expression Profiles | cell lines with high or low expression of TARBP2 gene relative to other cell lines from the BioGPS Cell Line Gene Expression Profiles dataset. | |
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of TARBP2 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| BioGPS Mouse Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of TARBP2 gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset. | |
| Carcinogenome Chemical Perturbation Carcinogenicity Signatures | small molecule perturbations changing expression of TARBP2 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of TARBP2 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of TARBP2 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| CCLE Cell Line Proteomics | Cell lines associated with TARBP2 protein from the CCLE Cell Line Proteomics dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of TARBP2 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of TARBP2 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of TARBP2 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
| CM4AI U2OS Cell Map Protein Localization Assemblies | assemblies containing TARBP2 protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset. | |
| CMAP Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of TARBP2 gene from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores | cellular components containing TARBP2 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing TARBP2 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores | cellular components containing TARBP2 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores | cellular components co-occuring with TARBP2 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with TARBP2 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| CORUM Protein Complexes | protein complexs containing TARBP2 protein from the CORUM Protein Complexes dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of TARBP2 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene Mutation Profiles | cell lines with TARBP2 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset. | |
| CTD Gene-Disease Associations | diseases associated with TARBP2 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| DeepCoverMOA Drug Mechanisms of Action | small molecule perturbations with high or low expression of TARBP2 protein relative to other small molecule perturbations from the DeepCoverMOA Drug Mechanisms of Action dataset. | |
| DepMap CRISPR Gene Dependency | cell lines with fitness changed by TARBP2 gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores | diseases co-occuring with TARBP2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with TARBP2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with TARBP2 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with TARBP2 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at TARBP2 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of TARBP2 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of TARBP2 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing TARBP2 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GAD Gene-Disease Associations | diseases associated with TARBP2 gene in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset. | |
| GAD High Level Gene-Disease Associations | diseases associated with TARBP2 gene in GWAS and other genetic association datasets from the GAD High Level Gene-Disease Associations dataset. | |
| GDSC Cell Line Gene Expression Profiles | cell lines with high or low expression of TARBP2 gene relative to other cell lines from the GDSC Cell Line Gene Expression Profiles dataset. | |
| GeneRIF Biological Term Annotations | biological terms co-occuring with TARBP2 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing TARBP2 from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of TARBP2 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of TARBP2 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of TARBP2 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of TARBP2 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of TARBP2 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of TARBP2 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GO Biological Process Annotations 2015 | biological processes involving TARBP2 gene from the curated GO Biological Process Annotations 2015 dataset. | |
| GO Biological Process Annotations 2023 | biological processes involving TARBP2 gene from the curated GO Biological Process Annotations 2023 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving TARBP2 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2015 | cellular components containing TARBP2 protein from the curated GO Cellular Component Annotations 2015 dataset. | |
| GO Cellular Component Annotations 2023 | cellular components containing TARBP2 protein from the curated GO Cellular Component Annotations 2023 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing TARBP2 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GO Molecular Function Annotations 2015 | molecular functions performed by TARBP2 gene from the curated GO Molecular Function Annotations 2015 dataset. | |
| GO Molecular Function Annotations 2023 | molecular functions performed by TARBP2 gene from the curated GO Molecular Function Annotations 2023 dataset. | |
| GO Molecular Function Annotations 2025 | molecular functions performed by TARBP2 gene from the curated GO Molecular Function Annotations 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of TARBP2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of TARBP2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of TARBP2 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with TARBP2 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles | cell lines with high or low expression of TARBP2 gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset. | |
| HPA Cell Line Gene Expression Profiles | cell lines with high or low expression of TARBP2 gene relative to other cell lines from the HPA Cell Line Gene Expression Profiles dataset. | |
| HPA Tissue Gene Expression Profiles | tissues with high or low expression of TARBP2 gene relative to other tissues from the HPA Tissue Gene Expression Profiles dataset. | |
| HPA Tissue Protein Expression Profiles | tissues with high or low expression of TARBP2 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset. | |
| HPA Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of TARBP2 gene relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset. | |
| Hub Proteins Protein-Protein Interactions | interacting hub proteins for TARBP2 from the curated Hub Proteins Protein-Protein Interactions dataset. | |
| HuGE Navigator Gene-Phenotype Associations | phenotypes associated with TARBP2 gene by text-mining GWAS publications from the HuGE Navigator Gene-Phenotype Associations dataset. | |
| InterPro Predicted Protein Domain Annotations | protein domains predicted for TARBP2 protein from the InterPro Predicted Protein Domain Annotations dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of TARBP2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of TARBP2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of TARBP2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Kinase Library Serine Threonine Kinome Atlas | kinases that phosphorylate TARBP2 protein from the Kinase Library Serine Threonine Atlas dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of TARBP2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of TARBP2 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles | cell lines with TARBP2 gene mutations from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of TARBP2 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| LINCS L1000 CMAP CRISPR Knockout Consensus Signatures | gene perturbations changing expression of TARBP2 gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. | |
| LOCATE Curated Protein Localization Annotations | cellular components containing TARBP2 protein in low- or high-throughput protein localization assays from the LOCATE Curated Protein Localization Annotations dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain TARBP2 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| MGI Mouse Phenotype Associations 2023 | phenotypes of transgenic mice caused by TARBP2 gene mutations from the MGI Mouse Phenotype Associations 2023 dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting TARBP2 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of TARBP2 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| MPO Gene-Phenotype Associations | phenotypes of transgenic mice caused by TARBP2 gene mutations from the MPO Gene-Phenotype Associations dataset. | |
| MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations | gene perturbations changing expression of TARBP2 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of TARBP2 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| NURSA Protein Complexes | protein complexs containing TARBP2 protein recovered by IP-MS from the NURSA Protein Complexes dataset. | |
| Pathway Commons Protein-Protein Interactions | interacting proteins for TARBP2 from the Pathway Commons Protein-Protein Interactions dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of TARBP2 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations | gene perturbations changing expression of TARBP2 gene from the PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| PFOCR Pathway Figure Associations 2023 | pathways involving TARBP2 protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
| PFOCR Pathway Figure Associations 2024 | pathways involving TARBP2 protein from the Wikipathways PFOCR 2024 dataset. | |
| Reactome Pathways 2014 | pathways involving TARBP2 protein from the Reactome Pathways dataset. | |
| Reactome Pathways 2024 | pathways involving TARBP2 protein from the Reactome Pathways 2024 dataset. | |
| Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of TARBP2 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
| Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of TARBP2 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
| Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of TARBP2 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
| Roadmap Epigenomics Cell and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of TARBP2 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue Gene Expression Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at TARBP2 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of TARBP2 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of TARBP2 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Sanger Dependency Map Cancer Cell Line Proteomics | cell lines associated with TARBP2 protein from the Sanger Dependency Map Cancer Cell Line Proteomics dataset. | |
| TargetScan Predicted Conserved microRNA Targets | microRNAs regulating expression of TARBP2 gene predicted using conserved miRNA seed sequences from the TargetScan Predicted Conserved microRNA Targets dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of TARBP2 gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of TARBP2 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores | tissues with high expression of TARBP2 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of TARBP2 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores | tissues with high expression of TARBP2 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of TARBP2 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with TARBP2 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with TARBP2 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |
| WikiPathways Pathways 2014 | pathways involving TARBP2 protein from the Wikipathways Pathways 2014 dataset. | |
| WikiPathways Pathways 2024 | pathways involving TARBP2 protein from the WikiPathways Pathways 2024 dataset. | |