| Name | TGIF2-RAB5IF readthrough |
| Description | This locus represents naturally occurring read-through transcription between the neighboring TGIF2 (TGFB-induced factor homeobox 2) and C20orf24 (chromosome 20 open reading frame 24) genes. The read-through transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Dec 2010] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nStudies have shown that 17β‐hydroxysteroid dehydrogenase‐13 (17β‐HSD13) is a liver‐specific, lipid droplet–associated protein that plays a crucial role in hepatic lipid metabolism. In human subjects with nonalcoholic fatty liver disease (NAFLD), its expression is markedly increased and the protein is localized to the surface of lipid droplets—findings that implicate 17β‐HSD13 in the pathogenesis of NAFLD. Its N‐terminal sequence functions as an endoplasmic reticulum and lipid droplet–targeting signal, distinguishing it from closely related enzyme family members and underscoring its liver-restricted functional specialization."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAnimal model studies complement these human findings. Hepatic overexpression of human 17β‐HSD13 in mice induces a fatty liver phenotype accompanied by increased levels of key lipogenic proteins such as mature sterol regulatory element–binding protein 1 and fatty acid synthase. In contrast, genetic disruption or mutation of HSD17B13 (including a targeted S33A mutation that abolishes a conserved PKA phosphorylation site) in mice results in reduced lipolysis due to impaired interaction with adipose triglyceride lipase (ATGL) and its coactivator CGI‑58. These models further demonstrate that loss of proper 17β‐HSD13 function leads to hepatic triglyceride accumulation, increased lipid synthesis, compromised mitochondrial β‑oxidation, and inflammation, thereby advancing NAFLD and nonalcoholic steatohepatitis (NASH)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its hepatic functions, recent evidence reveals that 17β‐HSD13 is also constitutively expressed in the kidney, ureter, and urinary bladder. This wider distribution suggests that its role in lipid metabolism may extend to the renal system, possibly influencing renal lipid accumulation and contributing to the risk of chronic kidney disease in the context of NAFLD."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Wen Su, Yang Wang, Xiao Jia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Comparative proteomic study reveals 17β-HSD13 as a pathogenic protein in nonalcoholic fatty liver disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1410741111"}], "href": "https://doi.org/10.1073/pnas.1410741111"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25028495"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25028495"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yuka Horiguchi, Makoto Araki, Kiyoto Motojima "}, {"type": "b", "children": [{"type": "t", "text": "17beta-Hydroxysteroid dehydrogenase type 13 is a liver-specific lipid droplet-associated protein."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2008.03.063"}], "href": "https://doi.org/10.1016/j.bbrc.2008.03.063"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18359291"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18359291"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Marion Adam, Hanna Heikelä, Cyril Sobolewski, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hydroxysteroid (17β) dehydrogenase 13 deficiency triggers hepatic steatosis and inflammation in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.201700914R"}], "href": "https://doi.org/10.1096/fj.201700914R"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29401633"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29401633"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Wen Su, Sijin Wu, Yongliang Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Phosphorylation of 17β-hydroxysteroid dehydrogenase 13 at serine 33 attenuates nonalcoholic fatty liver disease in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-022-34299-1"}], "href": "https://doi.org/10.1038/s41467-022-34299-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36323699"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36323699"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Haibo Zhang, Jiazhen Chang, Zhihong Dai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression and localization of HSD17B13 along mouse urinary tract."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Renal Physiol (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajprenal.00069.2024"}], "href": "https://doi.org/10.1152/ajprenal.00069.2024"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38779753"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38779753"}]}]}]}
|
| NCBI Gene ID | 100527943 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
TGIF2-RAB5IF has 269 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.
Click the + buttons to view associations for TGIF2-RAB5IF from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of TGIF2-RAB5IF gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing TGIF2-RAB5IF protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with TGIF2-RAB5IF protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with TGIF2-RAB5IF gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of TGIF2-RAB5IF gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with TGIF2-RAB5IF gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of TGIF2-RAB5IF gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of TGIF2-RAB5IF gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of TGIF2-RAB5IF gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of TGIF2-RAB5IF gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of TGIF2-RAB5IF gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of TGIF2-RAB5IF protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with TGIF2-RAB5IF protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |