TLCD4-RWDD3 Gene

Name TLCD4-RWDD3 readthrough
Description This locus represents naturally occurring read-through transcription between the neighboring TMEM56 (transmembrane protein 56) and RWDD3 (RWD domain containing 3) genes on chromosome 1. The read-through transcript encodes a protein that shares sequence identity with the upstream gene product, but it contains a distinct C-terminus due to frameshifts versus the downstream gene coding sequence. [provided by RefSeq, Dec 2010]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nCircTLCD4‐RWDD3 is a newly discovered circular RNA that is markedly upregulated in extracellular vesicles secreted by lymph node metastatic non‐small cell lung cancer (NSCLC) cells. High levels of EV-packaged circTLCD4-RWDD3 correlate with poorer overall and disease-free survival in patients. Importantly, downregulation of circTLCD4-RWDD3 in vitro and in vivo has been shown to inhibit lymphangiogenesis and subsequent lymph node metastasis, highlighting its contribution to the progression of NSCLC."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}, {"type": "p", "children": [{"type": "t", "text": "\nMechanistic studies revealed that circTLCD4-RWDD3 physically interacts with the RNA-binding protein hnRNPA2B1 and facilitates its SUMO2 modification at the K108 residue via upregulation of UBC9. This SUMOylated hnRNPA2B1 is then recognized by the SUMO interaction motif of ALIX, leading to its activation and subsequent recruitment of ESCRT-III proteins that mediate the efficient sorting of circTLCD4-RWDD3 into NSCLC-derived EVs. Once released and internalized by lymphatic endothelial cells, circTLCD4-RWDD3 activates the transcription of PROX1, thereby triggering lymphangiogenesis and promoting lymph node metastasis. These findings not only elucidate the functional role of circTLCD4-RWDD3 in NSCLC progression but also underscore its potential as a therapeutic target to prevent metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}]}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xiayao Diao, Chao Guo, Hanhao Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SUMOylation-triggered ALIX activation modulates extracellular vesicles circTLCD4-RWDD3 to promote lymphatic metastasis of non-small cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Signal Transduct Target Ther (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41392-023-01685-0"}], "href": "https://doi.org/10.1038/s41392-023-01685-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37925421"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37925421"}]}]}]}
NCBI Gene ID 100527978
API
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Predicted Functions View TLCD4-RWDD3's ARCHS4 Predicted Functions.
Co-expressed Genes View TLCD4-RWDD3's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View TLCD4-RWDD3's ARCHS4 Predicted Functions.

Functional Associations

TLCD4-RWDD3 has 137 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for TLCD4-RWDD3 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of TLCD4-RWDD3 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with TLCD4-RWDD3 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with TLCD4-RWDD3 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of TLCD4-RWDD3 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of TLCD4-RWDD3 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of TLCD4-RWDD3 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of TLCD4-RWDD3 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of TLCD4-RWDD3 gene from the RummaGEO Gene Perturbation Signatures dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with TLCD4-RWDD3 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.