TMLHE-AS1 Gene

Name TMLHE antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts directly mention TMLHE‐AS1, the group of studies collectively emphasizes the central role of Sox2 in maintaining pluripotency, guiding stem cell self‐renewal, and directing lineage specification across diverse developmental, adult, and even tumorigenic contexts. For instance, several reports document that Sox2 is indispensable in early embryogenesis and in sustaining the multipotency of embryonic and adult neural, epithelial, and mesenchymal stem cells."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "6"}]}, {"type": "t", "text": " These studies further illuminate how Sox2 participates in complex transcriptional circuits—often acting together with factors such as Oct4, Nanog, and others—to regulate gene networks essential for early cell-fate decisions, tissue homeostasis, and even tumor initiation and progression."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "7", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition, a number of these works highlight how Sox2’s regulatory activity is context dependent. In neural stem cells and in developing sensory tissues, Sox2 is required not only for the maintenance of an undifferentiated state but also for proper differentiation after receiving developmental cues."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "13"}]}, {"type": "t", "text": " Similarly, the ability of Sox2 to couple with different signals—such as Notch, FGF, Wnt, and others—ensures that cells balance self-renewal with the timely progression to differentiated fates; this versatility is also exploited in cancer, where Sox2-expressing cells have been implicated as key tumor-initiating or propagating populations."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "14", "end_ref": "17"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAgainst this backdrop, one may speculate that TMLHE‐AS1—a long noncoding antisense RNA—could provide an additional layer of regulation within these Sox2-centered transcriptional networks. Although none of the abstracts directly assay TMLHE‐AS1 function, its juxtaposition with studies that dissect Sox2’s nuanced roles in pluripotency, differentiation, and tissue regeneration suggests that TMLHE‐AS1 might modulate key transcriptional or chromatin‐remodeling events. Such a role could involve fine‐tuning Sox2 expression or its downstream effectors in specific developmental or pathological settings (for example, in neural, epithelial, and even cancer stem cell systems)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "18"}, {"type": "fg_f", "ref": "6"}, {"type": "fg_fs", "start_ref": "19", "end_ref": "32"}]}, {"type": "t", "text": " In sum, while the direct biological function of TMLHE‐AS1 awaits experimental elucidation, the pervasive influence of Sox2 in regulating cell identity implies that TMLHE‐AS1 may act as a molecular rheostat or modulator within these critical gene regulatory circuits. Further targeted studies will be necessary to determine whether TMLHE‐AS1 contributes to the fine balance between pluripotency and differentiation, as well as to pathological conditions such as tumorigenesis.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ariel A Avilion, Silvia K Nicolis, Larysa H Pevny, et al. 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NCBI Gene ID 100507404
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Download Associations
Predicted Functions View TMLHE-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View TMLHE-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View TMLHE-AS1's ARCHS4 Predicted Functions.

Functional Associations

TMLHE-AS1 has 571 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, chemical, cell line, cell type or tissue) extracted from 7 datasets.

Click the + buttons to view associations for TMLHE-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of TMLHE-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of TMLHE-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of TMLHE-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of TMLHE-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of TMLHE-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of TMLHE-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of TMLHE-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.