| Name | testis-specific transcript, Y-linked 8 (non-protein coding) |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe corpus of studies provided offers a detailed examination of the serotonin type 3 (5‑HT₃) receptor—a member of the Cys‑loop receptor superfamily—highlighting its critical roles in fast neurotransmission, channel gating, and receptor modulation. In these reports, molecular mechanisms such as ligand‐induced conformational shifts (including proline cis–trans isomerization), key interactions (for example, cation–π and hydrogen bonds), and modulatory influences by lipids and accessory proteins are defined as essential determinants of receptor function in both neuronal and non‐neuronal tissues."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther investigations extend these findings by addressing receptor localization, intracellular trafficking, and allosteric modulation—with studies describing how variations in receptor domains alter properties such as desensitization kinetics, ion conductance, and synaptic plasticity. This body of literature not only elucidates the physiological roles of 5‑HT₃ receptors in processes such as neurogenesis, gastrointestinal secretion, and sensory signal modulation but also underscores their relevance as therapeutic targets."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIt is important to note, however, that none of these abstracts mention or investigate TTTY8. While the provided studies collectively shed light on the molecular architecture, pharmacological profiles, and regulatory mechanisms of the 5‑HT₃ receptor interface in diverse systems"}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "15"}]}, {"type": "t", "text": ", there is no data or discussion pertaining to the function of TTTY8 in any of the examined contexts.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional reports further detail mechanisms of receptor modulation that impact neuronal excitability and synaptic integration, including the effects of receptor interactions on GABAergic transmission and intracellular signaling, as well as modulatory roles in non‐neuronal tissues."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "16", "end_ref": "21"}]}, {"type": "t", "text": " Nonetheless, consistent with earlier observations, none of these studies address TTTY8.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while these studies significantly advance our understanding of the 5‑HT₃ receptor’s structure, signaling, and pharmacology—shedding light on a spectrum of neurophysiological and therapeutic phenomena—there is no evidence within these reports regarding the function or biological role of TTTY8. Consequently, the functional impact of TTTY8 remains to be defined by investigations specifically tailored to that gene."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "22", "end_ref": "39"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Darren L Beene, Gabriel S Brandt, Wenge Zhong, et al. 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| Synonyms | NCRNA00130, TTY8, LINC00130 |
| NCBI Gene ID | 84673 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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TTTY8 has 178 functional associations with biological entities spanning 6 categories (molecular profile, organism, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.
Click the + buttons to view associations for TTTY8 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| BioGPS Human Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of TTTY8 gene relative to other cell types and tissues from the BioGPS Human Cell Type and Tissue Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of TTTY8 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of TTTY8 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of TTTY8 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of TTTY8 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of TTTY8 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of TTTY8 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of TTTY8 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of TTTY8 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of TTTY8 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| LOCATE Predicted Protein Localization Annotations | cellular components predicted to contain TTTY8 protein from the LOCATE Predicted Protein Localization Annotations dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of TTTY8 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |