| Name | ubiquitin specific peptidase 17-like family member 27 |
| Description | Enables RNA binding activity; cysteine-type deubiquitinase activity; and hyaluronic acid binding activity. Involved in positive regulation of epithelial cell apoptotic process and protein deubiquitination involved in ubiquitin-dependent protein catabolic process. Located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nResearch on the zinc transporter encoded by the SLC39A5 gene (commonly referred to as ZIP5) has revealed its critical role in maintaining zinc homeostasis. ZIP5 is expressed in key tissues—including the intestine, pancreas, liver, kidney, and developing epithelia—and is uniquely localized to the basolateral membranes of polarized cells. Under zinc‐replete conditions, ZIP5 is positioned to mediate zinc excretion from the body, whereas during zinc deficiency the protein is removed from the cell surface and degraded, even though its mRNA remains polysome-associated, thereby permitting rapid re‐synthesis upon zinc repletion. These dynamic expression and localization patterns distinguish ZIP5 from related transporters such as ZIP4, which is induced to enhance zinc uptake when zinc is scarce."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAt the molecular level, ZIP5 expression is governed not only transcriptionally but also through post‐transcriptional mechanisms. Its 3′-untranslated region forms a highly stable stem-loop structure flanked by conserved microRNA seed sites, which in conjunction with specific polysome-associated proteins, act to fine-tune ZIP5 translation in a zinc-dependent manner. In addition, structural characterization of the extracellular (PrP-like) domain of ZIP5 has revealed a dimeric, globular fold with significant α-helical content, suggesting an evolutionary link to prion proteins and hinting at unique biophysical properties that may influence its cellular function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its canonical role in zinc excretion, ZIP5 also contributes to specific cellular functions. In pancreatic β-cells, for instance, proper ZIP5 function is essential for adequate zinc influx, which in turn supports insulin synthesis, processing, and secretion. Moreover, recent studies have linked aberrant expression of SLC39A5/ZIP5 to oncogenic processes in lung adenocarcinoma, where overexpression correlates with enhanced cell proliferation via activation of PI3K/AKT signaling pathways. These insights underscore the potential of ZIP5 as both a critical regulator of systemic zinc balance and a promising target in metabolic and cancer-related disorders."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Fudi Wang, Byung-Eun Kim, Michael J Petris, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The mammalian Zip5 protein is a zinc transporter that localizes to the basolateral surface of polarized cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M408361200"}], "href": "https://doi.org/10.1074/jbc.M408361200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15322118"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15322118"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jodi Dufner-Beattie, Yien-Ming Kuo, Jane Gitschier, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The adaptive response to dietary zinc in mice involves the differential cellular localization and zinc regulation of the zinc transporters ZIP4 and ZIP5."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M409962200"}], "href": "https://doi.org/10.1074/jbc.M409962200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15358787"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15358787"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Zhixin L Huang, Jodi Dufner-Beattie, Glen K Andrews "}, {"type": "b", "children": [{"type": "t", "text": "Expression and regulation of SLC39A family zinc transporters in the developing mouse intestine."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Biol (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ydbio.2006.03.045"}], "href": "https://doi.org/10.1016/j.ydbio.2006.03.045"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16682017"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16682017"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Benjamin P Weaver, Jodi Dufner-Beattie, Taiho Kambe, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Novel zinc-responsive post-transcriptional mechanisms reciprocally regulate expression of the mouse Slc39a4 and Slc39a5 zinc transporters (Zip4 and Zip5)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Chem (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1515/BC.2007.149"}], "href": "https://doi.org/10.1515/BC.2007.149"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18020946"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18020946"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Jim Geiser, Robert C De Lisle, Glen K Andrews "}, {"type": "b", "children": [{"type": "t", "text": "The zinc transporter Zip5 (Slc39a5) regulates intestinal zinc excretion and protects the pancreas against zinc toxicity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0082149"}], "href": "https://doi.org/10.1371/journal.pone.0082149"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24303081"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24303081"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Benjamin P Weaver, Glen K Andrews "}, {"type": "b", "children": [{"type": "t", "text": "Regulation of zinc-responsive Slc39a5 (Zip5) translation is mediated by conserved elements in the 3'-untranslated region."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biometals (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10534-011-9508-4"}], "href": "https://doi.org/10.1007/s10534-011-9508-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22113231"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22113231"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Cosmin L Pocanschi, Sepehr Ehsani, Mohadeseh Mehrabian, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The ZIP5 ectodomain co-localizes with PrP and may acquire a PrP-like fold that assembles into a dimer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0072446"}], "href": "https://doi.org/10.1371/journal.pone.0072446"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24039764"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24039764"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Xinhui Wang, Hong Gao, Wenhui Wu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The zinc transporter Slc39a5 controls glucose sensing and insulin secretion in pancreatic β-cells via Sirt1- and Pgc-1α-mediated regulation of Glut2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Protein Cell (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13238-018-0580-1"}], "href": "https://doi.org/10.1007/s13238-018-0580-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30324491"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30324491"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Zhaohui Liu, Zheng Hu, Xingdong Cai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SLC39A5 promotes lung adenocarcinoma cell proliferation by activating PI3K/AKT signaling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pathol Res Pract (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.prp.2021.153541"}], "href": "https://doi.org/10.1016/j.prp.2021.153541"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34252710"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34252710"}]}]}]}
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| NCBI Gene ID | 728393 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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USP17L27 has 256 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.
Click the + buttons to view associations for USP17L27 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of USP17L27 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of USP17L27 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing USP17L27 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of USP17L27 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with USP17L27 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with USP17L27 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with USP17L27 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of USP17L27 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of USP17L27 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of USP17L27 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of USP17L27 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with USP17L27 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |