| Name | ubiquitin specific peptidase 17-like family member 30 |
| Description | Enables RNA binding activity; cysteine-type deubiquitinase activity; and hyaluronic acid binding activity. Involved in positive regulation of epithelial cell apoptotic process and protein deubiquitination involved in ubiquitin-dependent protein catabolic process. Located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA survey of the provided literature reveals extensive investigations into diverse regulators of cellular signaling, differentiation, and tissue homeostasis—including studies of chondroitin sulfate proteoglycan (CSPG) signaling through neuronal receptors (e.g., LAR [1], [10], [15]), enzymatic control of peptide hormones via prolylcarboxypeptidase (PRCP) (e.g., [4], [8], [12], [26]) and the role of unconventional myosins in cytoskeletal regulation and synaptic structure (e.g., [5], [6], [21], [28]). These reports describe how coordinated regulation of extracellular matrix interactions, receptor tyrosine phosphatases, and protease activity modulate axon regeneration, neurogenesis, metabolism, inflammation, and immune responses (e.g., [2], [3], [7], [9], [11], [13], [14], [16]–[25], [27], [29]–[32]). \n"}]}, {"type": "t", "text": "\n"}, {"type": "p", "children": [{"type": "t", "text": "\nNotably, however, none of the 32 abstracts provide evidence for or mention the deubiquitinating enzyme USP17L30. Thus, while the studies collectively illuminate multiple key pathways in nervous system repair, vascular and metabolic regulation, and immune cell function, they do not address any functional or regulatory attributes of USP17L30. In the absence of such data, the specific biological role of USP17L30 remains undefined within the context of these reports."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "32"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Daniel Fisher, Bin Xing, John Dill, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Leukocyte common antigen-related phosphatase is a functional receptor for chondroitin sulfate proteoglycan axon growth inhibitors."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.1737-11.2011"}], "href": "https://doi.org/10.1523/JNEUROSCI.1737-11.2011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21976490"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21976490"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Nicholas Wallingford, Bertrand Perroud, Qian Gao, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Downregulation of the LAR protein tyrosine phosphatase receptor is associated with increased dentate gyrus neurogenesis and an increased number of granule cell layer neurons."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Neurosci (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.mcn.2006.01.003"}], "href": "https://doi.org/10.1016/j.mcn.2006.01.003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16488625"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16488625"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Barbara Lorber, Wiljan J A J Hendriks, Catharina E E M Van der Zee, et al. 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| NCBI Gene ID | 728419 |
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| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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USP17L30 has 259 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.
Click the + buttons to view associations for USP17L30 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of USP17L30 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of USP17L30 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing USP17L30 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of USP17L30 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with USP17L30 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DisGeNET Gene-Disease Associations | diseases associated with USP17L30 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
| DisGeNET Gene-Phenotype Associations | phenotypes associated with USP17L30 gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of USP17L30 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of USP17L30 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of USP17L30 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of USP17L30 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of USP17L30 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with USP17L30 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |