ZFTRAF1 Gene

Name zinc finger TRAF-type containing 1
Description Predicted to enable zinc ion binding activity. Predicted to be located in nuclear envelope and perinuclear region of cytoplasm. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent investigations into proteins with zinc finger motifs and TRAF-like domains have hinted at a role in modulating cellular signaling pathways critical to oncogenesis. Although ZFTRAF1 itself has not been extensively characterized, studies evaluating related proteins such as CYHR1—involved in interactions with murine galectin-3—have begun to shed light on potential roles in tumor progression, cell adhesion, and intracellular communication. These findings, derived from research on esophageal cancer models, suggest that proteins sharing features with ZFTRAF1 may influence tumor behavior and patient outcomes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "Neurodevelopmental disorders, known for their clinical and genetic heterogeneity, have been linked to dysfunctions in a variety of cellular pathways. Although the precise mechanisms remain to be fully delineated, it is conceivable that proteins like ZFTRAF1—with structural elements that enable interactions across diverse signaling networks—could contribute to neural development and its disorders. Such insights point to the possibility that perturbations in the function of these multifaceted proteins may underlie aspects of neurodevelopmental pathomechanisms."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "Collectively, these emerging lines of evidence underscore the versatile roles of zinc finger proteins, including the putative functions of ZFTRAF1, in both cancer biology and neurodevelopment. The modulation of pathways ranging from galectin-associated signaling in esophageal cancer to the diverse intracellular cascades implicated in neurodevelopmental disorders invites further investigation. A deeper understanding of ZFTRAF1’s molecular interactions may ultimately pave the way for targeted therapeutic strategies in oncology and neuropsychiatric conditions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ryosuke Desaki, Genta Sawada, Hiroshi Okumura, et al. "}, {"type": "b", "children": [{"type": "t", "text": "As a Novel Prognostic Marker, Cysteine/histidine-rich 1 (CYHR1) is a Therapeutic Target in Patients with Esophageal Squamous Cell Carcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Ann Surg Oncol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1245/s10434-015-5031-0"}], "href": "https://doi.org/10.1245/s10434-015-5031-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26676980"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26676980"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Maria Asif, Arwa Ishaq A Khayyat, Salem Alawbathani, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Biallelic loss-of-function variants of ZFTRAF1 cause neurodevelopmental disorder with microcephaly and hypotonia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genet Med (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.gim.2024.101143"}], "href": "https://doi.org/10.1016/j.gim.2024.101143"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38641995"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38641995"}]}]}]}
NCBI Gene ID 50626
API
Download Associations
Predicted Functions View ZFTRAF1's ARCHS4 Predicted Functions.
Co-expressed Genes View ZFTRAF1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View ZFTRAF1's ARCHS4 Predicted Functions.

Functional Associations

ZFTRAF1 has 1,470 functional associations with biological entities spanning 5 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 22 datasets.

Click the + buttons to view associations for ZFTRAF1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of ZFTRAF1 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of ZFTRAF1 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of ZFTRAF1 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 cellular components containing ZFTRAF1 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with ZFTRAF1 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
GO Cellular Component Annotations 2025 cellular components containing ZFTRAF1 protein from the curated GO Cellular Component Annotations 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of ZFTRAF1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of ZFTRAF1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with ZFTRAF1 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
IMPC Knockout Mouse Phenotypes phenotypes of mice caused by ZFTRAF1 gene knockout from the IMPC Knockout Mouse Phenotypes dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of ZFTRAF1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of ZFTRAF1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures small molecule perturbations changing expression of ZFTRAF1 gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ZFTRAF1 gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ZFTRAF1 gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of ZFTRAF1 gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of ZFTRAF1 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of ZFTRAF1 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of ZFTRAF1 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of ZFTRAF1 gene from the Sci-Plex Drug Perturbation Signatures dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of ZFTRAF1 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with ZFTRAF1 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.