(R)-Verapamil (hydrochloride)_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description (R)-Verapamil (hydrochloride) perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the (R)-Verapamil (hydrochloride)_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.26754
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.142612
SMAD3 SMAD family member 3 0.136052
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.13512
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.134382
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.124105
SPTBN1 spectrin, beta, non-erythrocytic 1 0.120119
MYO1E myosin IE 0.118322
LCN2 lipocalin 2 0.112401
AKAP13 A kinase (PRKA) anchor protein 13 0.107862
AREG amphiregulin 0.0961384
INTS6 integrator complex subunit 6 0.0909183
EFNB2 ephrin-B2 0.0893424
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.089014
MACC1 metastasis associated in colon cancer 1 0.0804907
TSC22D1 TSC22 domain family, member 1 0.069853
VCL vinculin 0.0685461
TMC5 transmembrane channel-like 5 0.068356
ANXA2 annexin A2 0.0671563
BCL2L1 BCL2-like 1 0.0668756
TJP1 tight junction protein 1 0.0642724
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0640526
CATSPERB catsper channel auxiliary subunit beta 0.0626467
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0615324
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.060775
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0604645
ASPH aspartate beta-hydroxylase 0.0589992
SHB Src homology 2 domain containing adaptor protein B 0.0563667
ZSWIM6 zinc finger, SWIM-type containing 6 0.0553646
BAIAP2L1 BAI1-associated protein 2-like 1 0.053576
ERBIN erbb2 interacting protein 0.0527664
RNF213 ring finger protein 213 0.0500338
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0494737
EGR1 early growth response 1 0.0488391
EZR ezrin 0.0484182
DST dystonin 0.0471943
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0438264
SLK STE20-like kinase 0.0424972
SEPTIN9 septin 9 0.0423494
YAP1 Yes-associated protein 1 0.0414454
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0413193
CEMIP cell migration inducing protein, hyaluronan binding 0.0403467
KYNU kynureninase 0.0403076
VMP1 vacuole membrane protein 1 0.0401138
RBM47 RNA binding motif protein 47 0.0393915
EPS8 epidermal growth factor receptor pathway substrate 8 0.0392774
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0388197
ADAM10 ADAM metallopeptidase domain 10 0.0384031
MT2A metallothionein 2A 0.0376255
CXCL8 chemokine (C-X-C motif) ligand 8 0.0365462
LIPH lipase, member H 0.0360995
EXT1 exostosin glycosyltransferase 1 0.0357567
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0357497
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0353132
HKDC1 hexokinase domain containing 1 0.0352814
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0342768
EREG epiregulin 0.0342379
STS steroid sulfatase (microsomal), isozyme S 0.0341838
NABP1 nucleic acid binding protein 1 0.0337254
LPP LIM domain containing preferred translocation partner in lipoma 0.0334594
MAP7 microtubule-associated protein 7 0.0327928
TM4SF19 transmembrane 4 L six family member 19 0.0323149
SPAG9 sperm associated antigen 9 0.0317475
RAB7A RAB7A, member RAS oncogene family 0.0317195
FNIP2 folliculin interacting protein 2 0.0316694
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0314031
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0310835
ETV6 ets variant 6 0.0303272
DUSP10 dual specificity phosphatase 10 0.030323
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0301666
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0296474
LIMA1 LIM domain and actin binding 1 0.0295211
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0294953
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0294605
TOB1 transducer of ERBB2, 1 0.0294301
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0294123
TOX3 TOX high mobility group box family member 3 0.0292412
FHL2 four and a half LIM domains 2 0.0291951
GCLC glutamate-cysteine ligase, catalytic subunit 0.0288047
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0288042
CTNND1 catenin (cadherin-associated protein), delta 1 0.028333
NCEH1 neutral cholesterol ester hydrolase 1 0.028142
RPL23 ribosomal protein L23 0.0281023
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0280998
SOX9 SRY (sex determining region Y)-box 9 0.0277923
KLF6 Kruppel-like factor 6 0.0277277
PADI1 peptidyl arginine deiminase, type I 0.0275761
MCL1 myeloid cell leukemia 1 0.027416
MPRIP myosin phosphatase Rho interacting protein 0.0274087
PDLIM5 PDZ and LIM domain 5 0.0273251
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0272515
EPB41L1 erythrocyte membrane protein band 4.1-like 1 0.027046
UBE2H ubiquitin-conjugating enzyme E2H 0.0270196
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0269728
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0268733
ZNF292 zinc finger protein 292 0.0267817
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0265821
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0264823
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0262756
PRSS22 protease, serine, 22 0.0259322

decreased expression

Symbol Name Standardized Value
LYZ lysozyme -0.107923
ZMYND8 zinc finger, MYND-type containing 8 -0.107652
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.105999
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.102884
PTMA prothymosin, alpha -0.075365
PDIA3 protein disulfide isomerase family A, member 3 -0.072345
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0718052
PHF3 PHD finger protein 3 -0.0696244
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0674748
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0670385
EPSTI1 epithelial stromal interaction 1 (breast) -0.065327
RHOBTB3 Rho-related BTB domain containing 3 -0.0649713
H1-0 H1.0 linker histone -0.059273
TPT1 tumor protein, translationally-controlled 1 -0.0558449
BTBD9 BTB (POZ) domain containing 9 -0.0556368
AHI1 Abelson helper integration site 1 -0.053205
NPSR1 neuropeptide S receptor 1 -0.0529879
TXNIP thioredoxin interacting protein -0.0481697
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0477578
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0451941
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0448919
CANX calnexin -0.0443191
MBNL2 muscleblind-like splicing regulator 2 -0.0422611
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0422574
LOC112694756 uncharaterized LOC112694756 -0.0407451
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0397927
HDLBP high density lipoprotein binding protein -0.0387792
RBM39 RNA binding motif protein 39 -0.0378077
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0355317
PTEN phosphatase and tensin homolog -0.0351084
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0349898
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0349373
DIAPH3 diaphanous-related formin 3 -0.0347049
HLA-E major histocompatibility complex, class I, E -0.0337314
GOLGB1 golgin B1 -0.033377
EPCAM epithelial cell adhesion molecule -0.0324686
XAF1 XIAP associated factor 1 -0.0322803
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic -0.0318495
LCORL ligand dependent nuclear receptor corepressor-like -0.029982
MPHOSPH8 M-phase phosphoprotein 8 -0.0294598
S100A6 S100 calcium binding protein A6 -0.0294429
SEC24D SEC24 family member D -0.0294417
TTC3 tetratricopeptide repeat domain 3 -0.0290863
GRK3 G protein-coupled receptor kinase 3 -0.0287198
RRBP1 ribosome binding protein 1 -0.0286005
BRCA2 breast cancer 2, early onset -0.0284117
CD46 CD46 molecule, complement regulatory protein -0.0283561
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0281028
VDAC1 voltage-dependent anion channel 1 -0.0278015
COPB1 coatomer protein complex, subunit beta 1 -0.0276767
TFRC transferrin receptor -0.0274521
ANXA4 annexin A4 -0.0270584
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0268903
ZMYM2 zinc finger, MYM-type 2 -0.0266989
HBS1L HBS1-like translational GTPase -0.0265695
SMC4 structural maintenance of chromosomes 4 -0.026396
KDM3A lysine (K)-specific demethylase 3A -0.0263884
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0262637
FNDC3A fibronectin type III domain containing 3A -0.0262482
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0261764
EPHB2 EPH receptor B2 -0.0261419
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.025727
RNF149 ring finger protein 149 -0.0249311
COG6 component of oligomeric golgi complex 6 -0.0247819
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0247341
APOL6 apolipoprotein L, 6 -0.0247053
HMGB1 high mobility group box 1 -0.0246422
ACBD3 acyl-CoA binding domain containing 3 -0.024595
UBAC2 UBA domain containing 2 -0.0244167
GNAS GNAS complex locus -0.0240539
KPNB1 karyopherin (importin) beta 1 -0.023924
UBE3A ubiquitin protein ligase E3A -0.0238666
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0232277
CCDC146 coiled-coil domain containing 146 -0.022998
RNF43 ring finger protein 43 -0.0229266
SREBF2 sterol regulatory element binding transcription factor 2 -0.022908
NCOA2 nuclear receptor coactivator 2 -0.0226957
ZDHHC20 zinc finger, DHHC-type containing 20 -0.0222083
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) -0.0221059
MKI67 marker of proliferation Ki-67 -0.0220521
PATJ PATJ crumbs cell polarity complex component -0.0219608
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0218561
TPM4 tropomyosin 4 -0.0218467
SSH2 slingshot protein phosphatase 2 -0.0217563
APOL1 apolipoprotein L, 1 -0.0215337
KLHL24 kelch-like family member 24 -0.021355
SPG11 spastic paraplegia 11 (autosomal recessive) -0.021311
MAML2 mastermind-like 2 (Drosophila) -0.0211639
GRAMD2B GRAM domain containing 2B -0.0211153
LAP3 leucine aminopeptidase 3 -0.0209636
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0208289
RAB2A RAB2A, member RAS oncogene family -0.0207632
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0207276
WDR45B WD repeat domain 45B -0.0207209
HM13 histocompatibility (minor) 13 -0.0207165
GMDS GDP-mannose 4,6-dehydratase -0.020405
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0203562
MCTP2 multiple C2 domains, transmembrane 2 -0.0203106
SEC31A SEC31 homolog A (S. cerevisiae) -0.020283
MON2 MON2 homolog (S. cerevisiae) -0.020168