(R)-Verapamil (hydrochloride)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description (R)-Verapamil (hydrochloride) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the (R)-Verapamil (hydrochloride)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.296218
IGFBP1 insulin-like growth factor binding protein 1 0.167112
SAMD4A sterile alpha motif domain containing 4A 0.125922
SVIL supervillin 0.123985
DSPP dentin sialophosphoprotein 0.116209
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.104406
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0799069
MT2A metallothionein 2A 0.0717279
PDLIM5 PDZ and LIM domain 5 0.0699754
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0697563
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0683561
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0661441
APOB apolipoprotein B 0.0636828
BCL2L1 BCL2-like 1 0.0615064
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.061461
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0569873
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0569249
FAM107B family with sequence similarity 107, member B 0.0560928
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0550267
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0519476
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0468847
TIMP1 TIMP metallopeptidase inhibitor 1 0.0466978
EXT1 exostosin glycosyltransferase 1 0.0456761
MACF1 microtubule-actin crosslinking factor 1 0.0454004
INTS6 integrator complex subunit 6 0.0445585
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0441104
EFNA1 ephrin-A1 0.04383
CCL20 chemokine (C-C motif) ligand 20 0.0434499
NDRG1 N-myc downstream regulated 1 0.0411237
MBNL2 muscleblind-like splicing regulator 2 0.0397359
RPS4X ribosomal protein S4, X-linked 0.0396548
DDIT4 DNA-damage-inducible transcript 4 0.0391369
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.0385375
CEMIP2 cell migration inducing hyaluronidase 2 0.0383374
RPL23 ribosomal protein L23 0.0383358
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0376537
LDHA lactate dehydrogenase A 0.0368012
TNS1 tensin 1 0.0352499
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0348653
CLIC4 chloride intracellular channel 4 0.0347903
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0345954
SEPTIN9 septin 9 0.0342834
ADARB1 adenosine deaminase, RNA-specific, B1 0.0332585
KLF6 Kruppel-like factor 6 0.0328242
FUS FUS RNA binding protein 0.0326896
RAD51B RAD51 paralog B 0.0325148
LPCAT1 lysophosphatidylcholine acyltransferase 1 0.0322724
NIPBL Nipped-B homolog (Drosophila) 0.0322367
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0321036
TF transferrin 0.0298439
CREBBP CREB binding protein 0.0290615
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.028858
PRELID2 PRELI domain containing 2 0.0288206
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0288076
A2M alpha-2-macroglobulin 0.0286748
TLE4 transducin-like enhancer of split 4 0.0282113
ATXN1 ataxin 1 0.0282004
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0281096
MYO1E myosin IE 0.0279021
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.027779
SORBS1 sorbin and SH3 domain containing 1 0.0268005
FLNB filamin B, beta 0.0267917
KIF21A kinesin family member 21A 0.0264761
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0262836
FOXP1 forkhead box P1 0.0262768
KRT18 keratin 18, type I 0.0260942
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0260652
PRRC2C proline-rich coiled-coil 2C 0.0260403
ZBTB38 zinc finger and BTB domain containing 38 0.0258343
FERMT2 fermitin family member 2 0.0252101
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0247642
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0246493
IQSEC1 IQ motif and Sec7 domain 1 0.0245818
FBXL17 F-box and leucine-rich repeat protein 17 0.0245672
FLNA filamin A, alpha 0.0245454
JAG1 jagged 1 0.0244659
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0244137
RPS12 ribosomal protein S12 0.0243974
CLTC clathrin, heavy chain (Hc) 0.0243598
ACTN1 actinin, alpha 1 0.0241903
USP34 ubiquitin specific peptidase 34 0.0241772
PLEC plectin 0.0239551
CRY1 cryptochrome circadian clock 1 0.0239116
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0237738
RASA2 RAS p21 protein activator 2 0.0235535
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0234742
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0233854
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 0.0233715
BPTF bromodomain PHD finger transcription factor 0.0232243
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0231673
RPL11 ribosomal protein L11 0.0231626
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0231
JAK1 Janus kinase 1 0.0230959
FN1 fibronectin 1 0.0229813
EZR ezrin 0.0228942
ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 0.0228262
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0226506
SFTPA2 surfactant protein A2 0.0225185
AFDN afadin, adherens junction formation factor 0.0223901
TCIM transcriptional and immune response regulator 0.0222069

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.261409
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.170727
C3 complement component 3 -0.169178
FNDC3B fibronectin type III domain containing 3B -0.148402
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.142732
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.100071
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0974646
CP ceruloplasmin (ferroxidase) -0.0879627
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0757135
EML4 echinoderm microtubule associated protein like 4 -0.0734709
SLC38A2 solute carrier family 38, member 2 -0.072859
ZMYND8 zinc finger, MYND-type containing 8 -0.0701978
TPT1 tumor protein, translationally-controlled 1 -0.068023
PLIN2 perilipin 2 -0.0651125
STAT1 signal transducer and activator of transcription 1, 91kDa -0.064735
MAML2 mastermind-like 2 (Drosophila) -0.0613294
APOA2 apolipoprotein A-II -0.0564713
TPM4 tropomyosin 4 -0.0539455
ASPH aspartate beta-hydroxylase -0.0537739
EGR1 early growth response 1 -0.0515483
GPC6 glypican 6 -0.0507101
SESTD1 SEC14 and spectrin domains 1 -0.0506338
VCL vinculin -0.0470087
MSI2 musashi RNA-binding protein 2 -0.0433905
OSMR oncostatin M receptor -0.0432685
HMGA1 high mobility group AT-hook 1 -0.0429917
SOX5 SRY (sex determining region Y)-box 5 -0.0425317
LYZ lysozyme -0.0423605
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0415127
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0411203
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0407662
PERP PERP, TP53 apoptosis effector -0.0406163
GDF15 growth differentiation factor 15 -0.0395696
RPS6 ribosomal protein S6 -0.039213
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0383724
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0374673
FERMT1 fermitin family member 1 -0.037147
NPAS2 neuronal PAS domain protein 2 -0.0366567
DLC1 DLC1 Rho GTPase activating protein -0.0365734
RPL35A ribosomal protein L35a -0.0358112
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0357982
RPLP1 ribosomal protein, large, P1 -0.0353504
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0353017
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0352829
PEG3 paternally expressed 3 -0.0343407
EHBP1 EH domain binding protein 1 -0.0332824
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0332635
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0324744
LOC112694756 uncharaterized LOC112694756 -0.0319522
ITGAV integrin, alpha V -0.0316433
ATP10A ATPase, class V, type 10A -0.0312053
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0309505
NPR2 natriuretic peptide receptor 2 -0.0304066
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0301219
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0299408
GNAS GNAS complex locus -0.0297234
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0296875
LRMDA leucine rich melanocyte differentiation associated -0.0291762
RIGI RNA sensor RIG-I -0.0289232
RPLP0 ribosomal protein, large, P0 -0.0288248
ZNF644 zinc finger protein 644 -0.0286906
MX2 MX dynamin-like GTPase 2 -0.028127
TMEM51 transmembrane protein 51 -0.0278842
PGK1 phosphoglycerate kinase 1 -0.0271773
RBM39 RNA binding motif protein 39 -0.0270919
PDGFB platelet-derived growth factor beta polypeptide -0.0268512
RBM25 RNA binding motif protein 25 -0.0266174
MBNL3 muscleblind-like splicing regulator 3 -0.0264941
GMDS GDP-mannose 4,6-dehydratase -0.0262832
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0261494
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0259045
PDIA3 protein disulfide isomerase family A, member 3 -0.0257555
SLC38A1 solute carrier family 38, member 1 -0.0256007
ZFHX3 zinc finger homeobox 3 -0.0253907
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0253805
DNAAF9 dynein axonemal assembly factor 9 -0.0253774
TMEM123 transmembrane protein 123 -0.0251143
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0247009
WWC1 WW and C2 domain containing 1 -0.0246763
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.024502
MRTFA myocardin related transcription factor A -0.0242943
ARHGAP18 Rho GTPase activating protein 18 -0.0242933
GTF2IRD1 GTF2I repeat domain containing 1 -0.02401
COBLL1 cordon-bleu WH2 repeat protein-like 1 -0.0240063
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0238266
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0238086
CALD1 caldesmon 1 -0.023637
CYB5R3 cytochrome b5 reductase 3 -0.0235001
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0234384
SOX4 SRY (sex determining region Y)-box 4 -0.0234106
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0232833
TRIP12 thyroid hormone receptor interactor 12 -0.0232562
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0231852
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0231469
KPNB1 karyopherin (importin) beta 1 -0.0230886
COL27A1 collagen, type XXVII, alpha 1 -0.0229534
RRBP1 ribosome binding protein 1 -0.0228735
PLSCR1 phospholipid scramblase 1 -0.0227929
ARFGEF3 ARFGEF family member 3 -0.0226426
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -0.0225473