(R)-Verapamil (hydrochloride)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description (R)-Verapamil (hydrochloride) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the (R)-Verapamil (hydrochloride)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.235821
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.179023
LMO7 LIM domain 7 0.161245
LDHA lactate dehydrogenase A 0.102602
SPTBN1 spectrin, beta, non-erythrocytic 1 0.102401
KRT18 keratin 18, type I 0.0817393
EPS8 epidermal growth factor receptor pathway substrate 8 0.0704146
MYO1E myosin IE 0.0694831
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.069318
KLF5 Kruppel-like factor 5 (intestinal) 0.0604194
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0552132
MED13 mediator complex subunit 13 0.0550138
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0549133
EXT1 exostosin glycosyltransferase 1 0.0533392
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0508003
CEMIP2 cell migration inducing hyaluronidase 2 0.0467615
ERRFI1 ERBB receptor feedback inhibitor 1 0.046443
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.046092
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0449281
FAT1 FAT atypical cadherin 1 0.0436343
ITPRID2 ITPR interacting domain containing 2 0.0415656
LOC102724023 ES1 protein homolog, mitochondrial 0.0413649
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0401141
AREG amphiregulin 0.0384631
AFF1 AF4/FMR2 family, member 1 0.0382165
TXNIP thioredoxin interacting protein 0.0377254
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0374687
PDZD8 PDZ domain containing 8 0.0361164
EHF ets homologous factor 0.0360444
CD44 CD44 molecule (Indian blood group) 0.0355788
SOX9 SRY (sex determining region Y)-box 9 0.0345908
ARHGAP42 Rho GTPase activating protein 42 0.0342035
MBNL1 muscleblind-like splicing regulator 1 0.0336288
MUC13 mucin 13, cell surface associated 0.0334218
GDA guanine deaminase 0.0328937
ITGA6 integrin, alpha 6 0.0321072
ARHGAP26 Rho GTPase activating protein 26 0.0319146
PELI1 pellino E3 ubiquitin protein ligase 1 0.0318667
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0313207
RPS4X ribosomal protein S4, X-linked 0.0312725
PTPRR protein tyrosine phosphatase, receptor type, R 0.0308823
HSPA8 heat shock 70kDa protein 8 0.0307314
TSC22D1 TSC22 domain family, member 1 0.0302228
CLCN3 chloride channel, voltage-sensitive 3 0.0301431
ARL15 ADP-ribosylation factor-like 15 0.029759
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0295109
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0294097
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0291848
EREG epiregulin 0.0284656
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0282998
ADGRV1 adhesion G protein-coupled receptor V1 0.0276311
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0275631
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0275373
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.0255683
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0254612
MACF1 microtubule-actin crosslinking factor 1 0.0253096
CEMIP cell migration inducing protein, hyaluronan binding 0.0234268
USP53 ubiquitin specific peptidase 53 0.0234038
ASPH aspartate beta-hydroxylase 0.0232586
PDE10A phosphodiesterase 10A 0.0229686
TRIM2 tripartite motif containing 2 0.0229615
PRELID2 PRELI domain containing 2 0.022844
TGFBR3 transforming growth factor, beta receptor III 0.0225699
IQGAP1 IQ motif containing GTPase activating protein 1 0.0225012
PLS1 plastin 1 0.0224192
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 0.0224117
UBE2H ubiquitin-conjugating enzyme E2H 0.0223743
LAMA4 laminin, alpha 4 0.0222041
EPCAM epithelial cell adhesion molecule 0.0220876
FOXO1 forkhead box O1 0.0220771
PTBP3 polypyrimidine tract binding protein 3 0.0220758
KIAA1328 KIAA1328 0.0219269
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0217911
APP amyloid beta (A4) precursor protein 0.0216457
PKP2 plakophilin 2 0.0215145
SQSTM1 sequestosome 1 0.0214169
CYB5B cytochrome b5 type B (outer mitochondrial membrane) 0.0213238
RPLP0 ribosomal protein, large, P0 0.0212575
DUSP4 dual specificity phosphatase 4 0.0212347
FBXO11 F-box protein 11 0.0212307
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0208836
NCOA7 nuclear receptor coactivator 7 0.0208174
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0207235
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0206859
KMT2E lysine (K)-specific methyltransferase 2E 0.0204909
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0203821
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0202846
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0202393
ENO1 enolase 1, (alpha) 0.0202133
EXPH5 exophilin 5 0.0201881
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0201546
CAPRIN1 cell cycle associated protein 1 0.0196362
SMAD2 SMAD family member 2 0.0194972
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0194292
RNF43 ring finger protein 43 0.0191154
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0190326
SERINC5 serine incorporator 5 0.0189798
BHLHE40 basic helix-loop-helix family, member e40 0.0189136
DIAPH3 diaphanous-related formin 3 0.0187302
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0185228

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.230191
PTMA prothymosin, alpha -0.110501
RPS6 ribosomal protein S6 -0.104113
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0988855
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0966161
TMSB10 thymosin beta 10 -0.084677
ESYT2 extended synaptotagmin-like protein 2 -0.0661451
FLNB filamin B, beta -0.0619828
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.059781
PIGR polymeric immunoglobulin receptor -0.0596446
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0550464
KMT2C lysine (K)-specific methyltransferase 2C -0.0546283
ZFAND3 zinc finger, AN1-type domain 3 -0.0546201
NALF1 NALCN channel auxiliary factor 1 -0.0543716
PPARG peroxisome proliferator-activated receptor gamma -0.0535743
SLC35F3 solute carrier family 35, member F3 -0.0528424
BACE2 beta-site APP-cleaving enzyme 2 -0.0519905
EZR ezrin -0.0514494
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0480335
ACTN4 actinin, alpha 4 -0.0472206
GMDS GDP-mannose 4,6-dehydratase -0.0470961
PARD3 par-3 family cell polarity regulator -0.045429
KDM4C lysine (K)-specific demethylase 4C -0.0443574
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0440511
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0437846
CCNY cyclin Y -0.0437124
NFIA nuclear factor I/A -0.0436658
GREB1L growth regulation by estrogen in breast cancer-like -0.0436553
GOLGA4 golgin A4 -0.0430963
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0422769
SRRM2 serine/arginine repetitive matrix 2 -0.0421931
ZNF292 zinc finger protein 292 -0.0415529
AHNAK AHNAK nucleoprotein -0.0407754
CALB1 calbindin 1, 28kDa -0.0407122
RNF217 ring finger protein 217 -0.0406176
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.040426
DLG1 discs, large homolog 1 (Drosophila) -0.039358
ONECUT3 one cut homeobox 3 -0.0381504
GLG1 golgi glycoprotein 1 -0.0380853
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0378442
MAML3 mastermind-like 3 (Drosophila) -0.0378199
RAP1B RAP1B, member of RAS oncogene family -0.0376686
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0376143
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0375017
MCTP2 multiple C2 domains, transmembrane 2 -0.0373359
BTBD9 BTB (POZ) domain containing 9 -0.0359995
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0357772
GPHN gephyrin -0.0354174
PDE4D phosphodiesterase 4D, cAMP-specific -0.0354174
TPT1 tumor protein, translationally-controlled 1 -0.034933
RAD51B RAD51 paralog B -0.0345399
FNDC3B fibronectin type III domain containing 3B -0.0342126
MECOM MDS1 and EVI1 complex locus -0.0336549
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0335304
RIN2 Ras and Rab interactor 2 -0.0334009
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0330557
EPB41 erythrocyte membrane protein band 4.1 -0.0328271
PTK2 protein tyrosine kinase 2 -0.0326064
NCOR2 nuclear receptor corepressor 2 -0.0323571
FGD4 FYVE, RhoGEF and PH domain containing 4 -0.031806
VEGFA vascular endothelial growth factor A -0.0317628
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 -0.0316245
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0315069
ARHGAP6 Rho GTPase activating protein 6 -0.0313182
MSI2 musashi RNA-binding protein 2 -0.0311142
SORBS2 sorbin and SH3 domain containing 2 -0.0309893
RPS12 ribosomal protein S12 -0.0307284
SAMD5 sterile alpha motif domain containing 5 -0.0304681
DENND1A DENN/MADD domain containing 1A -0.0302336
NDRG1 N-myc downstream regulated 1 -0.0301676
MON2 MON2 homolog (S. cerevisiae) -0.0298272
TBC1D22A TBC1 domain family, member 22A -0.0296103
SLC10A7 solute carrier family 10, member 7 -0.0293352
COG5 component of oligomeric golgi complex 5 -0.0291584
CD46 CD46 molecule, complement regulatory protein -0.0290226
SBF2 SET binding factor 2 -0.0286752
SEC24D SEC24 family member D -0.0281572
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0279824
TNS4 tensin 4 -0.0276511
SETD5 SET domain containing 5 -0.026939
FAM13A family with sequence similarity 13, member A -0.0265041
PICALM phosphatidylinositol binding clathrin assembly protein -0.026422
IARS1 isoleucyl-tRNA synthetase 1 -0.0263009
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0262203
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0261358
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0260282
KRT8 keratin 8, type II -0.0259794
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0255313
PDIA3 protein disulfide isomerase family A, member 3 -0.0254903
GSK3B glycogen synthase kinase 3 beta -0.0253564
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0250105
BIRC6 baculoviral IAP repeat containing 6 -0.0247456
CDK13 cyclin-dependent kinase 13 -0.0247057
PHKB phosphorylase kinase, beta -0.0246423
PARD3B par-3 family cell polarity regulator beta -0.024537
CCDC91 coiled-coil domain containing 91 -0.0245364
RTN4 reticulon 4 -0.0245226
LIMCH1 LIM and calponin homology domains 1 -0.0244743
FNIP1 folliculin interacting protein 1 -0.0240348
RPL31 ribosomal protein L31 -0.024011