(R)-Verapamil (hydrochloride)_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description (R)-Verapamil (hydrochloride) perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the (R)-Verapamil (hydrochloride)_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.257959
IGFBP3 insulin-like growth factor binding protein 3 0.115073
PDE4D phosphodiesterase 4D, cAMP-specific 0.0809697
AKAP12 A kinase (PRKA) anchor protein 12 0.0800358
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0639593
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0638996
RPL23 ribosomal protein L23 0.0528879
PM20D1 peptidase M20 domain containing 1 0.0503232
ERRFI1 ERBB receptor feedback inhibitor 1 0.0472003
CCL5 chemokine (C-C motif) ligand 5 0.040645
FLNB filamin B, beta 0.0381565
RPS8 ribosomal protein S8 0.0378957
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0364545
C15ORF48 chromosome 15 open reading frame 48 0.0361511
SAMD4A sterile alpha motif domain containing 4A 0.0344408
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0333545
ACTN1 actinin, alpha 1 0.0333309
RPS12 ribosomal protein S12 0.0333235
HLA-B major histocompatibility complex, class I, B 0.0327292
NDRG1 N-myc downstream regulated 1 0.0326511
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0317526
DOCK5 dedicator of cytokinesis 5 0.0317479
HMOX1 heme oxygenase 1 0.0313599
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0300207
HSPA8 heat shock 70kDa protein 8 0.029818
MORF4L2 mortality factor 4 like 2 0.0290223
ANGPTL4 angiopoietin-like 4 0.0281226
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.02744
RPLP1 ribosomal protein, large, P1 0.0272523
RPL37A ribosomal protein L37a 0.0268447
RPS17 ribosomal protein S17 0.0263255
BMP6 bone morphogenetic protein 6 0.025918
BASP1 brain abundant, membrane attached signal protein 1 0.0255647
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0253426
RPS3 ribosomal protein S3 0.0251964
ARHGAP26 Rho GTPase activating protein 26 0.0250693
TIMP1 TIMP metallopeptidase inhibitor 1 0.0240553
RPL36 ribosomal protein L36 0.0239973
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0239424
RPS27 ribosomal protein S27 0.0237964
GRAMD1B GRAM domain containing 1B 0.0230865
ELL2 elongation factor, RNA polymerase II, 2 0.0229369
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.022624
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase 0.0223789
RPS29 ribosomal protein S29 0.0223385
CFLAR CASP8 and FADD-like apoptosis regulator 0.0223044
PRRC2C proline-rich coiled-coil 2C 0.0221396
LAMC2 laminin, gamma 2 0.0218576
WWOX WW domain containing oxidoreductase 0.0217358
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0216585
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.021156
ATXN1 ataxin 1 0.0211406
MCL1 myeloid cell leukemia 1 0.0211276
RPL31 ribosomal protein L31 0.0211135
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0210219
SOD2 superoxide dismutase 2, mitochondrial 0.0207605
RPS4X ribosomal protein S4, X-linked 0.0207598
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0206551
IER3 immediate early response 3 0.0204292
ZSWIM6 zinc finger, SWIM-type containing 6 0.0203242
GOLGB1 golgin B1 0.0201241
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 0.019965
SMOC1 SPARC related modular calcium binding 1 0.0199105
PTPRJ protein tyrosine phosphatase, receptor type, J 0.019308
KIAA0319 KIAA0319 0.0192133
APP amyloid beta (A4) precursor protein 0.0190566
TM4SF1 transmembrane 4 L six family member 1 0.0189416
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.018603
INHBA inhibin, beta A 0.0182628
IRAK2 interleukin-1 receptor-associated kinase 2 0.0178829
S100A10 S100 calcium binding protein A10 0.0177367
PRELID2 PRELI domain containing 2 0.0176551
NPAS2 neuronal PAS domain protein 2 0.017612
EPAS1 endothelial PAS domain protein 1 0.0174229
SFTPA2 surfactant protein A2 0.0170991
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0169223
NUMB numb homolog (Drosophila) 0.0168209
HLA-E major histocompatibility complex, class I, E 0.0164601
SEPTIN9 septin 9 0.0164261
PLEC plectin 0.0162902
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.0162116
NIPBL Nipped-B homolog (Drosophila) 0.0161616
FUS FUS RNA binding protein 0.016028
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.016022
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0158953
UBAP2L ubiquitin associated protein 2-like 0.0158575
PHF21A PHD finger protein 21A 0.015793
SERINC1 serine incorporator 1 0.0156455
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0154984
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0154863
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0154074
NFE2L2 nuclear factor, erythroid 2-like 2 0.0153334
TERF2IP telomeric repeat binding factor 2, interacting protein 0.0151092
BTBD9 BTB (POZ) domain containing 9 0.015024
IL6 interleukin 6 0.0148049
EZR ezrin 0.0147995
DSPP dentin sialophosphoprotein 0.0146124
RPL18 ribosomal protein L18 0.0145313
KIF13A kinesin family member 13A 0.0145005
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0144562

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.238916
VIM vimentin -0.141119
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.13579
TXNRD1 thioredoxin reductase 1 -0.123398
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.117233
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.104553
ACTG1 actin gamma 1 -0.0820561
TFPI2 tissue factor pathway inhibitor 2 -0.0772097
TMSB10 thymosin beta 10 -0.0769493
IGF2 insulin-like growth factor 2 -0.0727919
RPS4Y1 ribosomal protein S4, Y-linked 1 -0.0689665
WDR43 WD repeat domain 43 -0.0689576
HDAC9 histone deacetylase 9 -0.06545
POTEF POTE ankyrin domain family, member F -0.0652687
FGB fibrinogen beta chain -0.0642161
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0571351
RTN4 reticulon 4 -0.0557479
TPM4 tropomyosin 4 -0.0551669
ERBIN erbb2 interacting protein -0.0551032
EGR1 early growth response 1 -0.0542874
PTK2 protein tyrosine kinase 2 -0.0524399
PFN1 profilin 1 -0.0519107
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0518406
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0496431
S100A6 S100 calcium binding protein A6 -0.0490218
ATP5F1B ATP synthase F1 subunit beta -0.0481306
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0474456
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.046686
PKM pyruvate kinase, muscle -0.0464835
SLC38A2 solute carrier family 38, member 2 -0.0463257
ZNF207 zinc finger protein 207 -0.0444478
THSD4 thrombospondin, type I, domain containing 4 -0.0430557
RHOA ras homolog family member A -0.0426777
RASAL2 RAS protein activator like 2 -0.0426748
FTL ferritin, light polypeptide -0.0425579
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.041499
AK1 adenylate kinase 1 -0.0409824
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0403521
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0403281
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0393072
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0379808
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0378404
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0377128
PTMA prothymosin, alpha -0.0361872
PAWR PRKC, apoptosis, WT1, regulator -0.03586
LDHA lactate dehydrogenase A -0.035416
CYRIB CYFIP related Rac1 interactor B -0.035339
CHN1 chimerin 1 -0.0350978
USP3 ubiquitin specific peptidase 3 -0.0349365
UTRN utrophin -0.0343692
RBM25 RNA binding motif protein 25 -0.0340367
BABAM2 BRISC and BRCA1 A complex member 2 -0.0339868
RHEB Ras homolog enriched in brain -0.0339328
HMGA1 high mobility group AT-hook 1 -0.0338964
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0338711
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0337172
RAD21 RAD21 homolog (S. pombe) -0.0334796
RBM39 RNA binding motif protein 39 -0.0334198
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0328583
DENND4A DENN/MADD domain containing 4A -0.0328553
IGFBP4 insulin-like growth factor binding protein 4 -0.0323978
CCNL1 cyclin L1 -0.0323569
TAGLN2 transgelin 2 -0.0323112
LOC112694756 uncharaterized LOC112694756 -0.0320847
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0319599
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0318158
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0314693
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0311434
TPM3 tropomyosin 3 -0.0311069
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.031086
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.030664
PDLIM5 PDZ and LIM domain 5 -0.0300168
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0289334
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0286869
FTH1 ferritin, heavy polypeptide 1 -0.0284883
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0284103
BICC1 BicC family RNA binding protein 1 -0.0283611
ACACA acetyl-CoA carboxylase alpha -0.0277886
THBS1 thrombospondin 1 -0.0277299
NEGR1 neuronal growth regulator 1 -0.0273772
NOL10 nucleolar protein 10 -0.026846
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.026763
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0267507
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0266404
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0264968
ZFAND3 zinc finger, AN1-type domain 3 -0.0264847
ECT2 epithelial cell transforming 2 -0.026466
CMIP c-Maf inducing protein -0.0260351
EFNA5 ephrin-A5 -0.0257184
RPLP0 ribosomal protein, large, P0 -0.0256316
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0255399
GNAS GNAS complex locus -0.0251139
ADGRG6 adhesion G protein-coupled receptor G6 -0.0247278
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0245411
ADAM9 ADAM metallopeptidase domain 9 -0.024333
BCLAF1 BCL2-associated transcription factor 1 -0.0242445
KPNB1 karyopherin (importin) beta 1 -0.0238228
CBX5 chromobox homolog 5 -0.0238118
CENPF centromere protein F, 350/400kDa -0.0238106
IST1 increased sodium tolerance 1 homolog (yeast) -0.0237481