(R)-Verapamil (hydrochloride)_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description (R)-Verapamil (hydrochloride) perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the (R)-Verapamil (hydrochloride)_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.154471
FTL ferritin, light polypeptide 0.124752
IGFBP3 insulin-like growth factor binding protein 3 0.115128
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0925945
ERRFI1 ERBB receptor feedback inhibitor 1 0.0918983
TRIO trio Rho guanine nucleotide exchange factor 0.0836992
LAMB3 laminin, beta 3 0.0832021
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0796872
DUSP10 dual specificity phosphatase 10 0.0669416
WSB1 WD repeat and SOCS box containing 1 0.0622387
DSPP dentin sialophosphoprotein 0.061754
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0587854
RPL23 ribosomal protein L23 0.05709
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0559043
EZR ezrin 0.0559011
ELL2 elongation factor, RNA polymerase II, 2 0.0542467
PLEC plectin 0.0518296
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0517953
PRRC2C proline-rich coiled-coil 2C 0.0509881
APP amyloid beta (A4) precursor protein 0.0504856
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.049706
SPTBN1 spectrin, beta, non-erythrocytic 1 0.047224
RPS4X ribosomal protein S4, X-linked 0.0461933
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0458129
SOX4 SRY (sex determining region Y)-box 4 0.0458005
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0457419
BCL2L1 BCL2-like 1 0.0446438
FLNB filamin B, beta 0.0445585
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0434674
KLF6 Kruppel-like factor 6 0.0412058
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0411821
VGLL3 vestigial-like family member 3 0.0411353
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0410071
RACK1 receptor for activated C kinase 1 0.0408612
DST dystonin 0.0405864
ENO1 enolase 1, (alpha) 0.0403216
RPLP1 ribosomal protein, large, P1 0.0399134
LMO7 LIM domain 7 0.0384387
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0382867
NR3C2 nuclear receptor subfamily 3, group C, member 2 0.0382097
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0378862
MYO5B myosin VB 0.0376603
HSPA8 heat shock 70kDa protein 8 0.0376513
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0372694
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0370093
NRIP1 nuclear receptor interacting protein 1 0.0366115
UPP1 uridine phosphorylase 1 0.0361065
BHLHE40 basic helix-loop-helix family, member e40 0.0358265
EPS8 epidermal growth factor receptor pathway substrate 8 0.0357258
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.034966
TM4SF1 transmembrane 4 L six family member 1 0.0340541
ARRDC3 arrestin domain containing 3 0.0339506
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0338911
EGFR epidermal growth factor receptor 0.033695
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0328252
FBXO32 F-box protein 32 0.0326012
UBAP2L ubiquitin associated protein 2-like 0.0322265
RPS29 ribosomal protein S29 0.0321809
BASP1 brain abundant, membrane attached signal protein 1 0.0321162
FUS FUS RNA binding protein 0.0314896
TXNIP thioredoxin interacting protein 0.0314507
MACF1 microtubule-actin crosslinking factor 1 0.0312581
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0311676
JUN jun proto-oncogene 0.0311247
MORF4L2 mortality factor 4 like 2 0.0308813
MT2A metallothionein 2A 0.0305921
EIF1 eukaryotic translation initiation factor 1 0.030411
FNBP1L formin binding protein 1-like 0.0303053
MKI67 marker of proliferation Ki-67 0.0300287
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0298633
AHNAK2 AHNAK nucleoprotein 2 0.0292085
TUFT1 tuftelin 1 0.0291616
RPS19 ribosomal protein S19 0.0288985
RPS27 ribosomal protein S27 0.0288388
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0285241
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0278989
TJP1 tight junction protein 1 0.0276863
USP53 ubiquitin specific peptidase 53 0.0276684
SDC4 syndecan 4 0.02738
ACTN1 actinin, alpha 1 0.0272516
PPARG peroxisome proliferator-activated receptor gamma 0.0272184
CALR calreticulin 0.026923
RPS3 ribosomal protein S3 0.0268531
ZBTB38 zinc finger and BTB domain containing 38 0.0268208
IFI27 interferon, alpha-inducible protein 27 0.0266401
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0262524
ANXA1 annexin A1 0.0261809
AFF4 AF4/FMR2 family, member 4 0.0261191
AGO2 argonaute RISC catalytic component 2 0.0258565
TOP1 topoisomerase (DNA) I 0.0256444
KRT18 keratin 18, type I 0.0256059
TPT1 tumor protein, translationally-controlled 1 0.0255332
S100A10 S100 calcium binding protein A10 0.0255045
ESRP1 epithelial splicing regulatory protein 1 0.0254784
SH3KBP1 SH3-domain kinase binding protein 1 0.0251381
TMSB10 thymosin beta 10 0.025133
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0249681
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0247474
YBX1 Y box binding protein 1 0.0243983
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.023545

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.184449
LPP LIM domain containing preferred translocation partner in lipoma -0.156623
FNDC3B fibronectin type III domain containing 3B -0.119835
POTEF POTE ankyrin domain family, member F -0.119813
LIMCH1 LIM and calponin homology domains 1 -0.0918401
ASPH aspartate beta-hydroxylase -0.0910255
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0702266
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0658667
PDLIM5 PDZ and LIM domain 5 -0.0652353
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0621266
VCL vinculin -0.061428
NAMPT nicotinamide phosphoribosyltransferase -0.0563054
P4HB prolyl 4-hydroxylase, beta polypeptide -0.055873
GOLGA4 golgin A4 -0.052121
S100A6 S100 calcium binding protein A6 -0.0491837
PGK1 phosphoglycerate kinase 1 -0.0456019
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0451339
SEC24D SEC24 family member D -0.0447363
EFNA5 ephrin-A5 -0.0444716
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0441232
ARHGAP20 Rho GTPase activating protein 20 -0.0439285
FAM3C family with sequence similarity 3, member C -0.0429608
ACTG1 actin gamma 1 -0.0429011
F3 coagulation factor III (thromboplastin, tissue factor) -0.0426957
PLSCR1 phospholipid scramblase 1 -0.0426475
CD47 CD47 molecule -0.0424956
CCND1 cyclin D1 -0.0420619
CTSD cathepsin D -0.04113
RAI14 retinoic acid induced 14 -0.0408316
LOC112694756 uncharaterized LOC112694756 -0.040039
TAPBP TAP binding protein (tapasin) -0.0398229
TMEM263 transmembrane protein 263 -0.039515
HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 -0.0391804
RCOR1 REST corepressor 1 -0.0388777
RHOA ras homolog family member A -0.0381071
ADAM9 ADAM metallopeptidase domain 9 -0.0378999
VEGFA vascular endothelial growth factor A -0.0358706
PTK2 protein tyrosine kinase 2 -0.0357593
UBC ubiquitin C -0.0357341
DSTN destrin (actin depolymerizing factor) -0.0354247
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0353307
HMGA1 high mobility group AT-hook 1 -0.0350697
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0337007
TTC3 tetratricopeptide repeat domain 3 -0.0336181
CRABP2 cellular retinoic acid binding protein 2 -0.0330024
SETD5 SET domain containing 5 -0.0325982
MAML2 mastermind-like 2 (Drosophila) -0.0324932
TFG TRK-fused gene -0.0319721
CDC50A cell division cycle 50 P4-ATPase accessory subunit A -0.0313428
SCFD1 sec1 family domain containing 1 -0.03078
WARS1 tryptophanyl-tRNA synthetase 1 -0.0303675
SLMAP sarcolemma associated protein -0.0300815
GNAS GNAS complex locus -0.0300732
MRPS6 mitochondrial ribosomal protein S6 -0.0298009
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0293409
ADAR adenosine deaminase, RNA-specific -0.0287606
STRN3 striatin, calmodulin binding protein 3 -0.0284146
SLC34A2 solute carrier family 34 (type II sodium/phosphate cotransporter), member 2 -0.0282514
PKM pyruvate kinase, muscle -0.0281479
ANXA2 annexin A2 -0.0280489
ATP5F1B ATP synthase F1 subunit beta -0.0277627
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0276635
MCU mitochondrial calcium uniporter -0.027571
CD46 CD46 molecule, complement regulatory protein -0.027474
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0272483
MAP3K13 mitogen-activated protein kinase kinase kinase 13 -0.0269727
ATP11A ATPase, class VI, type 11A -0.0269046
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.025876
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein -0.0255854
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0254881
RIGI RNA sensor RIG-I -0.0254431
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0252133
EPCAM epithelial cell adhesion molecule -0.0250768
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0247503
SSBP2 single-stranded DNA binding protein 2 -0.0245173
TPM4 tropomyosin 4 -0.024507
SAMD4A sterile alpha motif domain containing 4A -0.0244521
RPLP0 ribosomal protein, large, P0 -0.0243896
MYH9 myosin, heavy chain 9, non-muscle -0.0241195
LY6E lymphocyte antigen 6 complex, locus E -0.0239037
KRT8 keratin 8, type II -0.0238502
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0238106
PRRC1 proline-rich coiled-coil 1 -0.0235132
CCNG2 cyclin G2 -0.0234787
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0234103
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0233362
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.023315
CCNL1 cyclin L1 -0.0232596
ZNF207 zinc finger protein 207 -0.0229392
SP100 SP100 nuclear antigen -0.022929
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0229253
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0227871
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0225374
GOLT1B golgi transport 1B -0.0224428
FOSL1 FOS-like antigen 1 -0.0223718
MON2 MON2 homolog (S. cerevisiae) -0.0221157
PPP1R15B protein phosphatase 1, regulatory subunit 15B -0.0219054
ARF4 ADP-ribosylation factor 4 -0.0218734
PALLD palladin, cytoskeletal associated protein -0.0217989
MSMO1 methylsterol monooxygenase 1 -0.0216685