(R)-Verapamil (hydrochloride)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description (R)-Verapamil (hydrochloride) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the (R)-Verapamil (hydrochloride)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0991927
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0921845
ADAM10 ADAM metallopeptidase domain 10 0.0745657
TXNRD1 thioredoxin reductase 1 0.065935
TOP2A topoisomerase (DNA) II alpha 170kDa 0.062482
GOLGA4 golgin A4 0.0548734
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0518522
NQO1 NAD(P)H dehydrogenase, quinone 1 0.045979
SMC3 structural maintenance of chromosomes 3 0.0455809
TMF1 TATA element modulatory factor 1 0.0444533
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0426108
CENPF centromere protein F, 350/400kDa 0.0414545
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0413872
PHIP pleckstrin homology domain interacting protein 0.0389188
FLNB filamin B, beta 0.0382959
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0372974
SET SET nuclear proto-oncogene 0.036658
WSB1 WD repeat and SOCS box containing 1 0.0357908
PRRC2C proline-rich coiled-coil 2C 0.0357592
ZBTB20 zinc finger and BTB domain containing 20 0.0349649
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0341227
BRWD1 bromodomain and WD repeat domain containing 1 0.0338766
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.0338665
NAV2 neuron navigator 2 0.0324115
CCDC88A coiled-coil domain containing 88A 0.0323688
RAB6A RAB6A, member RAS oncogene family 0.0317205
TRERF1 transcriptional regulating factor 1 0.0314638
DOCK3 dedicator of cytokinesis 3 0.0313801
AKAP9 A kinase (PRKA) anchor protein 9 0.030599
TXNIP thioredoxin interacting protein 0.0302169
MXI1 MAX interactor 1, dimerization protein 0.0298812
PHF21A PHD finger protein 21A 0.0297198
RNF145 ring finger protein 145 0.0296637
ZMYM2 zinc finger, MYM-type 2 0.0293822
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0292591
KIF5B kinesin family member 5B 0.0291618
HELZ helicase with zinc finger 0.0282985
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0281302
NOP58 NOP58 ribonucleoprotein 0.0276673
CCNL1 cyclin L1 0.0273434
SPAG9 sperm associated antigen 9 0.0265625
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0263206
THOC2 THO complex 2 0.0256941
KDM3A lysine (K)-specific demethylase 3A 0.0254479
MORF4L2 mortality factor 4 like 2 0.0253836
RBM25 RNA binding motif protein 25 0.0253253
MT2A metallothionein 2A 0.0250402
GCLM glutamate-cysteine ligase, modifier subunit 0.0250086
HDAC9 histone deacetylase 9 0.0249678
SETD5 SET domain containing 5 0.0247497
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0246952
SBF2 SET binding factor 2 0.0245977
ZNF292 zinc finger protein 292 0.0242272
TPR translocated promoter region, nuclear basket protein 0.0239333
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.023578
SEPTIN7 septin 7 0.0234338
FAM13A family with sequence similarity 13, member A 0.0232276
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.023169
TOB1 transducer of ERBB2, 1 0.0230662
SMC4 structural maintenance of chromosomes 4 0.0229918
LDHA lactate dehydrogenase A 0.0229723
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0228573
ZRANB2 zinc finger, RAN-binding domain containing 2 0.0226997
DSTN destrin (actin depolymerizing factor) 0.0225193
MKI67 marker of proliferation Ki-67 0.0225021
ELOVL5 ELOVL fatty acid elongase 5 0.0222065
PTCH1 patched 1 0.0221733
LPCAT1 lysophosphatidylcholine acyltransferase 1 0.0221191
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0220297
DSCAM Down syndrome cell adhesion molecule 0.0219584
CALU calumenin 0.0219431
PHC3 polyhomeotic homolog 3 (Drosophila) 0.021705
RBBP6 retinoblastoma binding protein 6 0.021649
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.02162
WDR45B WD repeat domain 45B 0.0215676
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 0.0214749
KTN1 kinectin 1 (kinesin receptor) 0.0214212
CHD1 chromodomain helicase DNA binding protein 1 0.02135
SEC23A Sec23 homolog A (S. cerevisiae) 0.0210585
CHD7 chromodomain helicase DNA binding protein 7 0.021058
TPX2 TPX2, microtubule-associated 0.0210473
UBA6 ubiquitin-like modifier activating enzyme 6 0.0207997
ZNF148 zinc finger protein 148 0.0206623
RB1CC1 RB1-inducible coiled-coil 1 0.0206339
COPA coatomer protein complex, subunit alpha 0.0206112
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0205024
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0204568
CSNK1A1 casein kinase 1, alpha 1 0.0202232
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0199555
EXOC6B exocyst complex component 6B 0.0199423
B2M beta-2-microglobulin 0.0199157
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa 0.0199149
TPM4 tropomyosin 4 0.019842
PCM1 pericentriolar material 1 0.0196759
PDS5A PDS5 cohesin associated factor A 0.0196664
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0196631
DARS1 aspartyl-tRNA synthetase 1 0.0195941
CUL5 cullin 5 0.0195822
ENO1 enolase 1, (alpha) 0.0193172
CKAP2 cytoskeleton associated protein 2 0.0193086

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.252718
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.211282
CPED1 cadherin-like and PC-esterase domain containing 1 -0.185834
PDE4B phosphodiesterase 4B, cAMP-specific -0.176005
AHNAK AHNAK nucleoprotein -0.164663
VCL vinculin -0.144362
BMP10 bone morphogenetic protein 10 -0.121971
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.113865
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.106176
PTMA prothymosin, alpha -0.10551
DLG1 discs, large homolog 1 (Drosophila) -0.102481
RPL35A ribosomal protein L35a -0.0863075
TPT1 tumor protein, translationally-controlled 1 -0.08619
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0780775
RPS6 ribosomal protein S6 -0.0752448
ACTG1 actin gamma 1 -0.0722759
RPLP1 ribosomal protein, large, P1 -0.0720599
RPL34 ribosomal protein L34 -0.0707097
PDE4D phosphodiesterase 4D, cAMP-specific -0.0678185
PDGFC platelet derived growth factor C -0.0659622
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0645885
SSBP2 single-stranded DNA binding protein 2 -0.0612809
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.058794
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0580988
LOC112694756 uncharaterized LOC112694756 -0.0572492
INTS6 integrator complex subunit 6 -0.0570145
RPS19 ribosomal protein S19 -0.0565013
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0555438
GLI3 GLI family zinc finger 3 -0.0548166
RPS8 ribosomal protein S8 -0.0501754
GLI2 GLI family zinc finger 2 -0.050166
CCND1 cyclin D1 -0.049948
DIAPH3 diaphanous-related formin 3 -0.048358
TMSB4X thymosin beta 4, X-linked -0.0479192
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0477261
RHOA ras homolog family member A -0.0464806
TTC28 tetratricopeptide repeat domain 28 -0.0464395
NBEA neurobeachin -0.0463325
RPS27A ribosomal protein S27a -0.0461637
AEBP2 AE binding protein 2 -0.0459055
EGFR epidermal growth factor receptor -0.0455167
RPS25 ribosomal protein S25 -0.045266
RPL31 ribosomal protein L31 -0.0446724
RPL4 ribosomal protein L4 -0.0445448
TAS2R14 taste receptor, type 2, member 14 -0.044116
SLC38A2 solute carrier family 38, member 2 -0.0440711
NCEH1 neutral cholesterol ester hydrolase 1 -0.0434716
RPL19 ribosomal protein L19 -0.0433023
EEF1G eukaryotic translation elongation factor 1 gamma -0.0426771
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0418883
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0418571
MYO5C myosin VC -0.0414887
BMP2K BMP2 inducible kinase -0.0412587
RPL12 ribosomal protein L12 -0.0407928
CRPPA CDP-L-ribitol pyrophosphorylase A -0.0407236
FOXP1 forkhead box P1 -0.0403372
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0399831
UNC13A unc-13 homolog A (C. elegans) -0.0395354
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0382962
POTEF POTE ankyrin domain family, member F -0.037833
RPS13 ribosomal protein S13 -0.036923
FER1L6 fer-1-like family member 6 -0.0366494
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0363254
PDE7B phosphodiesterase 7B -0.0363048
TM4SF1 transmembrane 4 L six family member 1 -0.0361927
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.036042
RPL11 ribosomal protein L11 -0.0357317
RPL23 ribosomal protein L23 -0.0357196
EXT1 exostosin glycosyltransferase 1 -0.0356635
RPL7A ribosomal protein L7a -0.0356238
RPS21 ribosomal protein S21 -0.0355959
RPS23 ribosomal protein S23 -0.0355797
EEF2 eukaryotic translation elongation factor 2 -0.0355398
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0355309
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0354781
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0354657
RPLP2 ribosomal protein, large, P2 -0.0354135
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0348631
EVI5 ecotropic viral integration site 5 -0.0346096
RPL26 ribosomal protein L26 -0.0341276
RPS24 ribosomal protein S24 -0.033454
RPL9 ribosomal protein L9 -0.032714
RPL28 ribosomal protein L28 -0.0323404
RPL32 ribosomal protein L32 -0.0322778
RPL37A ribosomal protein L37a -0.0321346
S100A9 S100 calcium binding protein A9 -0.0320452
DPYD dihydropyrimidine dehydrogenase -0.0318491
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0318212
RPS16 ribosomal protein S16 -0.031651
RPLP0 ribosomal protein, large, P0 -0.0316237
ZEB1 zinc finger E-box binding homeobox 1 -0.0315739
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0313169
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0308585
EFNA5 ephrin-A5 -0.0308186
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0301986
ZNF217 zinc finger protein 217 -0.0301651
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0299425
CAMKMT calmodulin-lysine N-methyltransferase -0.0296853
HEG1 heart development protein with EGF-like domains 1 -0.0293212
S100A6 S100 calcium binding protein A6 -0.0289234