(R)-Verapamil (hydrochloride)_SW480 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description (R)-Verapamil (hydrochloride) perturbation in SW480 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the (R)-Verapamil (hydrochloride)_SW480 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.151692
NKD1 naked cuticle homolog 1 (Drosophila) 0.13652
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.105526
RPS4X ribosomal protein S4, X-linked 0.0824817
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0788875
SYT1 synaptotagmin I 0.0742441
BCL2L1 BCL2-like 1 0.0671562
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0662831
LDHA lactate dehydrogenase A 0.0595345
TNS3 tensin 3 0.0579205
LOC102724023 ES1 protein homolog, mitochondrial 0.0550296
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0545808
DSPP dentin sialophosphoprotein 0.0519295
ACTN1 actinin, alpha 1 0.049397
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0491825
EZR ezrin 0.049151
KRT18 keratin 18, type I 0.0488815
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0477621
BMP5 bone morphogenetic protein 5 0.0469906
LMO7 LIM domain 7 0.0465874
WWOX WW domain containing oxidoreductase 0.0456085
YAP1 Yes-associated protein 1 0.0452039
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0424856
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0416925
AOPEP aminopeptidase O (putative) 0.041192
PCLO piccolo presynaptic cytomatrix protein 0.0403635
SEPTIN9 septin 9 0.0397778
ZBTB38 zinc finger and BTB domain containing 38 0.0394346
PRRC2C proline-rich coiled-coil 2C 0.036196
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0360343
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0360202
FOXP1 forkhead box P1 0.0353663
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0351055
RPS12 ribosomal protein S12 0.0350046
GLI3 GLI family zinc finger 3 0.0347231
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0346877
EFNB2 ephrin-B2 0.0339465
HSPA8 heat shock 70kDa protein 8 0.0330689
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0327508
SPATA13 spermatogenesis associated 13 0.0321312
TJP1 tight junction protein 1 0.0318036
EGR1 early growth response 1 0.031444
PUM1 pumilio RNA-binding family member 1 0.0310152
ITPRID2 ITPR interacting domain containing 2 0.0309802
SVIL supervillin 0.0304879
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0304021
FUS FUS RNA binding protein 0.0299983
MT2A metallothionein 2A 0.0299263
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0295879
DOCK5 dedicator of cytokinesis 5 0.0292955
SPIDR scaffolding protein involved in DNA repair 0.0291765
NONO non-POU domain containing, octamer-binding 0.0288298
MKI67 marker of proliferation Ki-67 0.02854
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0285365
RACK1 receptor for activated C kinase 1 0.0284699
CENPF centromere protein F, 350/400kDa 0.0279533
RNF43 ring finger protein 43 0.0279484
MBNL1 muscleblind-like splicing regulator 1 0.0279305
RPS3 ribosomal protein S3 0.0274414
ARHGAP42 Rho GTPase activating protein 42 0.0271377
PCM1 pericentriolar material 1 0.0266458
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 0.0264571
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0261233
TIAM1 T-cell lymphoma invasion and metastasis 1 0.0260896
WNK1 WNK lysine deficient protein kinase 1 0.026063
EHBP1 EH domain binding protein 1 0.0255191
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0254512
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0253508
PDLIM5 PDZ and LIM domain 5 0.0250132
MCC mutated in colorectal cancers 0.024828
KLF12 Kruppel-like factor 12 0.0247969
SYK spleen tyrosine kinase 0.0247142
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.024431
NCEH1 neutral cholesterol ester hydrolase 1 0.024366
BCAS3 breast carcinoma amplified sequence 3 0.0242369
EGFR epidermal growth factor receptor 0.0241862
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0240363
TSC22D1 TSC22 domain family, member 1 0.0237889
VMP1 vacuole membrane protein 1 0.0230357
ARGLU1 arginine and glutamate rich 1 0.0229856
SMAD3 SMAD family member 3 0.0229785
PRELID2 PRELI domain containing 2 0.0227325
CTNND1 catenin (cadherin-associated protein), delta 1 0.0226381
ENO1 enolase 1, (alpha) 0.0224787
CSNK1A1 casein kinase 1, alpha 1 0.0222545
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.022241
LRP6 low density lipoprotein receptor-related protein 6 0.0221322
NEBL nebulette 0.0220908
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0218073
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 0.0214672
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0212873
OXR1 oxidation resistance 1 0.0212521
CREBBP CREB binding protein 0.0210694
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0210335
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0209286
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0208752
SMYD3 SET and MYND domain containing 3 0.0208646
DST dystonin 0.0208115
EXOC6B exocyst complex component 6B 0.0206154
CUL3 cullin 3 0.0204671

decreased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.201567
AKAP12 A kinase (PRKA) anchor protein 12 -0.146134
CDH13 cadherin 13 -0.129556
ANO1 anoctamin 1, calcium activated chloride channel -0.118542
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.102983
SDK1 sidekick cell adhesion molecule 1 -0.089154
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0805507
PTMA prothymosin, alpha -0.0793045
RPS6 ribosomal protein S6 -0.077155
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0755196
NAV2 neuron navigator 2 -0.0738425
ESYT2 extended synaptotagmin-like protein 2 -0.0692134
KRT8 keratin 8, type II -0.0676847
SKAP1 src kinase associated phosphoprotein 1 -0.0659472
RPL35A ribosomal protein L35a -0.0652137
MRPS6 mitochondrial ribosomal protein S6 -0.0651349
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0648449
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0640859
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0626285
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0582621
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0576921
GOLGA4 golgin A4 -0.0562325
CCND1 cyclin D1 -0.0544749
ANXA2 annexin A2 -0.0541869
HMGA1 high mobility group AT-hook 1 -0.0519641
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.051886
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.051181
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0507989
ACTG1 actin gamma 1 -0.0499463
CANX calnexin -0.0498853
GLG1 golgi glycoprotein 1 -0.0491638
AHNAK AHNAK nucleoprotein -0.0485821
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0484658
MAML2 mastermind-like 2 (Drosophila) -0.0467797
BACE2 beta-site APP-cleaving enzyme 2 -0.0459565
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0458841
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0456833
TMSB10 thymosin beta 10 -0.0436398
ZBTB20 zinc finger and BTB domain containing 20 -0.0434881
ITGB4 integrin, beta 4 -0.0431546
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0418749
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.041458
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0411986
TPM4 tropomyosin 4 -0.0399212
PDGFA platelet-derived growth factor alpha polypeptide -0.0395154
PERP PERP, TP53 apoptosis effector -0.0391721
MYOF myoferlin -0.0389781
FTH1 ferritin, heavy polypeptide 1 -0.0384928
TMSB4X thymosin beta 4, X-linked -0.0383489
PFN1 profilin 1 -0.0380579
ZMYND8 zinc finger, MYND-type containing 8 -0.0377652
PDIA3 protein disulfide isomerase family A, member 3 -0.0366401
ETNK1 ethanolamine kinase 1 -0.0355317
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0354539
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0352549
CBX5 chromobox homolog 5 -0.0348843
FLNB filamin B, beta -0.0348652
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0347701
ASPH aspartate beta-hydroxylase -0.0345681
ARF4 ADP-ribosylation factor 4 -0.0331951
POTEF POTE ankyrin domain family, member F -0.0329419
PGK1 phosphoglycerate kinase 1 -0.0328769
PKM pyruvate kinase, muscle -0.0328647
FRMD5 FERM domain containing 5 -0.0319746
LOC112694756 uncharaterized LOC112694756 -0.0317617
EEF1G eukaryotic translation elongation factor 1 gamma -0.0297325
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0290237
H1-0 H1.0 linker histone -0.0284785
SEC31A SEC31 homolog A (S. cerevisiae) -0.0284041
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0280485
KIZ kizuna centrosomal protein -0.0277612
SETD5 SET domain containing 5 -0.0268924
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0267534
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 -0.0266404
KMT2C lysine (K)-specific methyltransferase 2C -0.0265333
NKTR natural killer cell triggering receptor -0.0261293
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0257492
ITGA6 integrin, alpha 6 -0.0256111
SPDYA speedy/RINGO cell cycle regulator family member A -0.025479
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0254177
TNIK TRAF2 and NCK interacting kinase -0.0253738
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.024734
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0245694
GMDS GDP-mannose 4,6-dehydratase -0.0242979
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.0242326
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0241549
PDE4D phosphodiesterase 4D, cAMP-specific -0.0241129
RHOA ras homolog family member A -0.0238116
HM13 histocompatibility (minor) 13 -0.0235732
RBM39 RNA binding motif protein 39 -0.0235009
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -0.0234455
COG5 component of oligomeric golgi complex 5 -0.023195
KDM4C lysine (K)-specific demethylase 4C -0.0230036
COPA coatomer protein complex, subunit alpha -0.0228735
RPLP1 ribosomal protein, large, P1 -0.0228578
VIM vimentin -0.0228554
NCOR2 nuclear receptor corepressor 2 -0.0228187
FNDC3B fibronectin type III domain containing 3B -0.0226858
RBM25 RNA binding motif protein 25 -0.0225354
COPB1 coatomer protein complex, subunit beta 1 -0.0223058