(S)-Crizotinib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description (S)-Crizotinib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the (S)-Crizotinib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.14367
MEF2A myocyte enhancer factor 2A 0.125652
AKAP12 A kinase (PRKA) anchor protein 12 0.124561
FAM13A family with sequence similarity 13, member A 0.0885558
PTPRD protein tyrosine phosphatase, receptor type, D 0.0846758
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0808933
LIMCH1 LIM and calponin homology domains 1 0.0633676
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0605122
DTNA dystrobrevin, alpha 0.0525516
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0508465
MACF1 microtubule-actin crosslinking factor 1 0.0506801
PCBP2 poly(rC) binding protein 2 0.0495761
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0492225
ZNF292 zinc finger protein 292 0.0488724
SLITRK6 SLIT and NTRK-like family, member 6 0.0486099
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0465345
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0462069
VEGFA vascular endothelial growth factor A 0.0457943
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0457873
NAMPT nicotinamide phosphoribosyltransferase 0.0453606
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0451811
PTPRM protein tyrosine phosphatase, receptor type, M 0.0439186
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0436421
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0435489
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0414595
ITPRID2 ITPR interacting domain containing 2 0.0406778
ZNF148 zinc finger protein 148 0.0405865
FNDC3B fibronectin type III domain containing 3B 0.0402563
ASPH aspartate beta-hydroxylase 0.039923
PCDH9 protocadherin 9 0.0396759
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0382666
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.038229
MSI2 musashi RNA-binding protein 2 0.0378676
PGK1 phosphoglycerate kinase 1 0.0369005
THSD4 thrombospondin, type I, domain containing 4 0.0345285
AHR aryl hydrocarbon receptor 0.033706
SOS1 son of sevenless homolog 1 (Drosophila) 0.0330916
XRN1 5'-3' exoribonuclease 1 0.032904
ATXN1 ataxin 1 0.0325728
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0323786
RNF145 ring finger protein 145 0.0322365
CENPF centromere protein F, 350/400kDa 0.0313063
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0310783
NBEA neurobeachin 0.0308058
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0307868
NRG1 neuregulin 1 0.0301225
NDRG1 N-myc downstream regulated 1 0.0300236
DPH6 diphthamine biosynthesis 6 0.029962
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0296064
CDH13 cadherin 13 0.0293554
FLNB filamin B, beta 0.0291419
PKM pyruvate kinase, muscle 0.0290779
ADGRB3 adhesion G protein-coupled receptor B3 0.0289358
ZNF638 zinc finger protein 638 0.0286408
PAPOLA poly(A) polymerase alpha 0.0284949
HELZ helicase with zinc finger 0.028376
RAD51B RAD51 paralog B 0.0283442
TOP1 topoisomerase (DNA) I 0.0280174
VCAN versican 0.0279942
DIAPH2 diaphanous-related formin 2 0.0276076
LSAMP limbic system-associated membrane protein 0.0275705
SFTPA2 surfactant protein A2 0.0273742
LDHA lactate dehydrogenase A 0.0272924
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0271992
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0270468
TTC3 tetratricopeptide repeat domain 3 0.0267906
LINGO2 leucine rich repeat and Ig domain containing 2 0.0267875
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0265703
PIAS2 protein inhibitor of activated STAT, 2 0.0261885
ATM ATM serine/threonine kinase 0.0260907
COPA coatomer protein complex, subunit alpha 0.0259956
INSIG2 insulin induced gene 2 0.0258743
CADM1 cell adhesion molecule 1 0.0258458
SMYD3 SET and MYND domain containing 3 0.0258141
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0257898
PEAK1 pseudopodium-enriched atypical kinase 1 0.0257545
DST dystonin 0.0256314
AKAP13 A kinase (PRKA) anchor protein 13 0.0255552
PICALM phosphatidylinositol binding clathrin assembly protein 0.0255327
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.0255046
ESYT2 extended synaptotagmin-like protein 2 0.0254101
IGFBP3 insulin-like growth factor binding protein 3 0.0253759
FXR1 fragile X mental retardation, autosomal homolog 1 0.0252527
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0251977
ENO1 enolase 1, (alpha) 0.0249193
PLAT plasminogen activator, tissue 0.0246429
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.024547
B2M beta-2-microglobulin 0.0243978
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 0.0243812
EZR ezrin 0.0243588
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0243569
H1-3 H1.3 linker histone, cluster member 0.024195
KDM6A lysine (K)-specific demethylase 6A 0.0241768
UBA6 ubiquitin-like modifier activating enzyme 6 0.0241477
ZBTB20 zinc finger and BTB domain containing 20 0.0239985
SMAD3 SMAD family member 3 0.0239131
EXOC4 exocyst complex component 4 0.0238729
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0237652
MAML2 mastermind-like 2 (Drosophila) 0.0236909
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0236833

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.17235
COL1A1 collagen, type I, alpha 1 -0.10805
PTMA prothymosin, alpha -0.105619
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.101216
FMN1 formin 1 -0.0886332
ACTG1 actin gamma 1 -0.0874383
TPST1 tyrosylprotein sulfotransferase 1 -0.0862182
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0767089
COL3A1 collagen, type III, alpha 1 -0.0571355
TPT1 tumor protein, translationally-controlled 1 -0.0542443
RPL38 ribosomal protein L38 -0.0539729
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0484676
EXT1 exostosin glycosyltransferase 1 -0.0476709
RIGI RNA sensor RIG-I -0.0456841
RPLP1 ribosomal protein, large, P1 -0.041809
VCL vinculin -0.0416243
RPL19 ribosomal protein L19 -0.041346
CANX calnexin -0.039133
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0385912
GLCCI1 glucocorticoid induced 1 -0.0384514
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0384375
LPIN1 lipin 1 -0.0380422
RPS6 ribosomal protein S6 -0.0372181
FRMD4A FERM domain containing 4A -0.0370663
SIK2 salt-inducible kinase 2 -0.03687
HAND2 heart and neural crest derivatives expressed 2 -0.0356464
RPS24 ribosomal protein S24 -0.0351085
HMGB2 high mobility group box 2 -0.0333025
UNC5C unc-5 homolog C (C. elegans) -0.0323499
AOPEP aminopeptidase O (putative) -0.0319297
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0318146
RPL34 ribosomal protein L34 -0.0309815
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0305514
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0304973
NCOA7 nuclear receptor coactivator 7 -0.0296845
RNF213 ring finger protein 213 -0.0291159
TRIB2 tribbles pseudokinase 2 -0.0290365
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0278966
RPL32 ribosomal protein L32 -0.0278847
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0278547
NT5C2 5'-nucleotidase, cytosolic II -0.0271218
RPL35A ribosomal protein L35a -0.0258952
IGFBP4 insulin-like growth factor binding protein 4 -0.0254712
FBXO34 F-box protein 34 -0.0253042
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D -0.0248537
CDC27 cell division cycle 27 -0.0243101
RPL26 ribosomal protein L26 -0.0240824
RBM39 RNA binding motif protein 39 -0.023956
RPL28 ribosomal protein L28 -0.0236835
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0235014
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 -0.0234898
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.023312
IER3 immediate early response 3 -0.0233112
ZNF804A zinc finger protein 804A -0.0230207
TTC17 tetratricopeptide repeat domain 17 -0.0230092
KIF21A kinesin family member 21A -0.0227353
PDZRN3 PDZ domain containing ring finger 3 -0.022706
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0224724
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0224511
CFDP1 craniofacial development protein 1 -0.0222967
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae) -0.0221995
SCLT1 sodium channel and clathrin linker 1 -0.0216939
PDE10A phosphodiesterase 10A -0.0216805
GRK5 G protein-coupled receptor kinase 5 -0.0214573
PLPP1 phospholipid phosphatase 1 -0.0213757
BMERB1 bMERB domain containing 1 -0.0211387
CCND1 cyclin D1 -0.0211254
SOD2 superoxide dismutase 2, mitochondrial -0.0210123
GNAS GNAS complex locus -0.0208766
FBXL20 F-box and leucine-rich repeat protein 20 -0.0206638
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0206261
TBX2 T-box 2 -0.0204758
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha -0.0203354
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0202612
FNDC3A fibronectin type III domain containing 3A -0.0202365
THBS1 thrombospondin 1 -0.0201939
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0200076
LMNA lamin A/C -0.0200048
GPATCH8 G patch domain containing 8 -0.0199135
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 -0.0197808
RAB21 RAB21, member RAS oncogene family -0.0196574
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0196189
RPS27 ribosomal protein S27 -0.0195629
PRRC2C proline-rich coiled-coil 2C -0.0195353
EDEM3 ER degradation enhancer, mannosidase alpha-like 3 -0.0195057
CLTC clathrin, heavy chain (Hc) -0.0194803
PRSS12 protease, serine, 12 (neurotrypsin, motopsin) -0.0194281
SYNPO2 synaptopodin 2 -0.0194187
UBE2O ubiquitin-conjugating enzyme E2O -0.0192914
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0191185
ZNF609 zinc finger protein 609 -0.0190948
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0189329
PMP22 peripheral myelin protein 22 -0.0189126
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.018894
PELO pelota homolog (Drosophila) -0.0188392
ARF1 ADP-ribosylation factor 1 -0.0187795
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0186964
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 -0.0183926
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0181321
RPL6 ribosomal protein L6 -0.018093