| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | γ-Oryzanol perturbation in SW 1088 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the γ-Oryzanol_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| CXCL8 | chemokine (C-X-C motif) ligand 8 | 0.124237 |
| AKAP9 | A kinase (PRKA) anchor protein 9 | 0.0918558 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 | 0.0788774 |
| TTC3 | tetratricopeptide repeat domain 3 | 0.0657477 |
| PRRC2C | proline-rich coiled-coil 2C | 0.0592755 |
| COL6A3 | collagen, type VI, alpha 3 | 0.0539333 |
| ITGA5 | integrin, alpha 5 (fibronectin receptor, alpha polypeptide) | 0.0535001 |
| NAMPT | nicotinamide phosphoribosyltransferase | 0.051689 |
| RNF145 | ring finger protein 145 | 0.0506225 |
| IL6 | interleukin 6 | 0.050276 |
| KDM2A | lysine (K)-specific demethylase 2A | 0.0492209 |
| VIM | vimentin | 0.0487099 |
| TFPI | tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) | 0.0461767 |
| ABL2 | ABL proto-oncogene 2, non-receptor tyrosine kinase | 0.0447964 |
| SEC31A | SEC31 homolog A (S. cerevisiae) | 0.0447248 |
| RAB1A | RAB1A, member RAS oncogene family | 0.0443019 |
| STC1 | stanniocalcin 1 | 0.0422093 |
| THOC2 | THO complex 2 | 0.0417198 |
| CAPZA1 | capping protein (actin filament) muscle Z-line, alpha 1 | 0.041601 |
| COPA | coatomer protein complex, subunit alpha | 0.0415195 |
| LMAN1 | lectin, mannose-binding, 1 | 0.0409246 |
| RBM25 | RNA binding motif protein 25 | 0.0398908 |
| TM4SF1 | transmembrane 4 L six family member 1 | 0.0388159 |
| DYNC2I1 | dynein 2 intermediate chain 1 | 0.0371351 |
| ASPH | aspartate beta-hydroxylase | 0.0366623 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.0365489 |
| PDXDC1 | pyridoxal-dependent decarboxylase domain containing 1 | 0.0365453 |
| DSCAM | Down syndrome cell adhesion molecule | 0.0362925 |
| SAMD4A | sterile alpha motif domain containing 4A | 0.0362874 |
| ANXA2 | annexin A2 | 0.0360103 |
| ANXA5 | annexin A5 | 0.0358964 |
| PAG1 | phosphoprotein membrane anchor with glycosphingolipid microdomains 1 | 0.0358579 |
| UBE2D3 | ubiquitin-conjugating enzyme E2D 3 | 0.0356558 |
| ZCCHC7 | zinc finger, CCHC domain containing 7 | 0.0346081 |
| HAPSTR1 | HUWE1 associated protein modifying stress responses | 0.0343867 |
| PTK2 | protein tyrosine kinase 2 | 0.0340204 |
| GPBP1 | GC-rich promoter binding protein 1 | 0.0338937 |
| BBS9 | Bardet-Biedl syndrome 9 | 0.0338784 |
| PGK1 | phosphoglycerate kinase 1 | 0.0334623 |
| PPP1R15A | protein phosphatase 1, regulatory subunit 15A | 0.0331848 |
| DDIT4 | DNA-damage-inducible transcript 4 | 0.0325982 |
| FKBP10 | FK506 binding protein 10, 65 kDa | 0.0325531 |
| SPAG9 | sperm associated antigen 9 | 0.0323867 |
| BPTF | bromodomain PHD finger transcription factor | 0.0322168 |
| SRGAP1 | SLIT-ROBO Rho GTPase activating protein 1 | 0.0320655 |
| GCC2 | GRIP and coiled-coil domain containing 2 | 0.0320114 |
| SCAMP1 | secretory carrier membrane protein 1 | 0.0315047 |
| SCFD1 | sec1 family domain containing 1 | 0.0313837 |
| RHOA | ras homolog family member A | 0.031066 |
| CAP1 | CAP, adenylate cyclase-associated protein 1 (yeast) | 0.0307129 |
| MON2 | MON2 homolog (S. cerevisiae) | 0.0306748 |
| LIMS1 | LIM and senescent cell antigen-like domains 1 | 0.030239 |
| DNAAF9 | dynein axonemal assembly factor 9 | 0.0299714 |
| VDAC1 | voltage-dependent anion channel 1 | 0.029877 |
| CALR | calreticulin | 0.029261 |
| WDFY2 | WD repeat and FYVE domain containing 2 | 0.0289747 |
| STC2 | stanniocalcin 2 | 0.0289618 |
| TIMP3 | TIMP metallopeptidase inhibitor 3 | 0.0288263 |
| WDR26 | WD repeat domain 26 | 0.0286959 |
| LOX | lysyl oxidase | 0.0283674 |
| RPS19 | ribosomal protein S19 | 0.0280195 |
| GOLGA4 | golgin A4 | 0.0280138 |
| DDX1 | DEAD (Asp-Glu-Ala-Asp) box helicase 1 | 0.02776 |
| MMP12 | matrix metallopeptidase 12 | 0.0277426 |
| CAPN2 | calpain 2, (m/II) large subunit | 0.0272682 |
| EHBP1 | EH domain binding protein 1 | 0.0272275 |
| CIRSR | corepressor of RBPJ and splicing regulator | 0.0271828 |
| NUFIP2 | nuclear fragile X mental retardation protein interacting protein 2 | 0.0271541 |
| GOLGB1 | golgin B1 | 0.027076 |
| HERC4 | HECT and RLD domain containing E3 ubiquitin protein ligase 4 | 0.0270261 |
| ACTR3 | ARP3 actin-related protein 3 homolog (yeast) | 0.0267849 |
| CDK17 | cyclin-dependent kinase 17 | 0.0266828 |
| USP34 | ubiquitin specific peptidase 34 | 0.0264117 |
| EXOC4 | exocyst complex component 4 | 0.0263483 |
| TENT5A | terminal nucleotidyltransferase 5A | 0.0263031 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.0262123 |
| BIRC6 | baculoviral IAP repeat containing 6 | 0.0261796 |
| PDPK1 | 3-phosphoinositide dependent protein kinase 1 | 0.0256933 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 0.0256893 |
| STAU1 | staufen double-stranded RNA binding protein 1 | 0.0256062 |
| LAMB3 | laminin, beta 3 | 0.0254805 |
| COL5A2 | collagen, type V, alpha 2 | 0.0254375 |
| IKBIP | IKBKB interacting protein | 0.0253846 |
| TMED9 | transmembrane emp24 protein transport domain containing 9 | 0.0253779 |
| RRAS2 | related RAS viral (r-ras) oncogene homolog 2 | 0.0253677 |
| PTPRM | protein tyrosine phosphatase, receptor type, M | 0.0250242 |
| NCKAP1 | NCK-associated protein 1 | 0.0249032 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | 0.0248437 |
| TBC1D23 | TBC1 domain family, member 23 | 0.0247464 |
| BCL2L1 | BCL2-like 1 | 0.0245795 |
| EGFR | epidermal growth factor receptor | 0.0244908 |
| USP9Y | ubiquitin specific peptidase 9, Y-linked | 0.0244175 |
| TRPM7 | transient receptor potential cation channel, subfamily M, member 7 | 0.0242315 |
| ACTN1 | actinin, alpha 1 | 0.0241964 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | 0.0241905 |
| MORF4L2 | mortality factor 4 like 2 | 0.02414 |
| MKLN1 | muskelin 1, intracellular mediator containing kelch motifs | 0.0241307 |
| PDE8A | phosphodiesterase 8A | 0.0240365 |
| FTL | ferritin, light polypeptide | 0.0240156 |
| YWHAE | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon | 0.023874 |
| Symbol | Name | Standardized Value |
|---|---|---|
| MT2A | metallothionein 2A | -0.196394 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.109181 |
| B2M | beta-2-microglobulin | -0.108238 |
| ZC3HAV1 | zinc finger CCCH-type, antiviral 1 | -0.0862059 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | -0.0822831 |
| MEF2A | myocyte enhancer factor 2A | -0.0763751 |
| HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | -0.0749405 |
| IGFBP3 | insulin-like growth factor binding protein 3 | -0.0735665 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0708405 |
| ZNF395 | zinc finger protein 395 | -0.0646578 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | -0.0618319 |
| PTMA | prothymosin, alpha | -0.0571259 |
| SMYD3 | SET and MYND domain containing 3 | -0.056964 |
| HNRNPU | heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) | -0.0526952 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0521698 |
| TRA2A | transformer 2 alpha homolog (Drosophila) | -0.0519261 |
| ANLN | anillin, actin binding protein | -0.0503781 |
| LGALS1 | lectin, galactoside-binding, soluble, 1 | -0.0500906 |
| IGFBP7 | insulin-like growth factor binding protein 7 | -0.0490975 |
| PRELID2 | PRELI domain containing 2 | -0.0476182 |
| STAT3 | signal transducer and activator of transcription 3 (acute-phase response factor) | -0.0469558 |
| FUS | FUS RNA binding protein | -0.0453544 |
| SETD5 | SET domain containing 5 | -0.0450372 |
| FAM13B | family with sequence similarity 13, member B | -0.0445819 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0439084 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0432681 |
| PDIA4 | protein disulfide isomerase family A, member 4 | -0.0423366 |
| PRKCA | protein kinase C, alpha | -0.0410006 |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | -0.04088 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | -0.0405992 |
| AVL9 | AVL9 homolog (S. cerevisiase) | -0.0402945 |
| PRKDC | protein kinase, DNA-activated, catalytic polypeptide | -0.0400697 |
| MAPK8 | mitogen-activated protein kinase 8 | -0.0396753 |
| CCDC88A | coiled-coil domain containing 88A | -0.0387641 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0384637 |
| FNDC3B | fibronectin type III domain containing 3B | -0.0382893 |
| SUB1 | SUB1 homolog (S. cerevisiae) | -0.037866 |
| JARID2 | jumonji, AT rich interactive domain 2 | -0.037097 |
| ELL2 | elongation factor, RNA polymerase II, 2 | -0.0368681 |
| PTPN14 | protein tyrosine phosphatase, non-receptor type 14 | -0.0368005 |
| MYOF | myoferlin | -0.036564 |
| SLC4A7 | solute carrier family 4, sodium bicarbonate cotransporter, member 7 | -0.0363793 |
| TGFBI | transforming growth factor, beta-induced, 68kDa | -0.0363345 |
| RPS2 | ribosomal protein S2 | -0.0359778 |
| CKAP5 | cytoskeleton associated protein 5 | -0.0358992 |
| SPARC | secreted protein, acidic, cysteine-rich (osteonectin) | -0.0353466 |
| COL6A1 | collagen, type VI, alpha 1 | -0.0350939 |
| PPME1 | protein phosphatase methylesterase 1 | -0.0347009 |
| RNF24 | ring finger protein 24 | -0.0344211 |
| LCORL | ligand dependent nuclear receptor corepressor-like | -0.0341377 |
| COL4A1 | collagen, type IV, alpha 1 | -0.0337513 |
| WDPCP | WD repeat containing planar cell polarity effector | -0.0337114 |
| WDR45B | WD repeat domain 45B | -0.0335123 |
| TENT4A | terminal nucleotidyltransferase 4A | -0.0334094 |
| CCNI | cyclin I | -0.0332916 |
| STAG2 | stromal antigen 2 | -0.0329665 |
| DPYD | dihydropyrimidine dehydrogenase | -0.0327368 |
| CXCL3 | chemokine (C-X-C motif) ligand 3 | -0.0323203 |
| SYNRG | synergin, gamma | -0.0316946 |
| LAMB1 | laminin, beta 1 | -0.0315605 |
| KMT2E | lysine (K)-specific methyltransferase 2E | -0.0314333 |
| SDK1 | sidekick cell adhesion molecule 1 | -0.0313473 |
| IARS1 | isoleucyl-tRNA synthetase 1 | -0.0312737 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | -0.0312152 |
| DNAJC3 | DnaJ (Hsp40) homolog, subfamily C, member 3 | -0.0309387 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0308213 |
| MKI67 | marker of proliferation Ki-67 | -0.0307537 |
| ATP11B | ATPase, class VI, type 11B | -0.0304213 |
| COL5A1 | collagen, type V, alpha 1 | -0.0304085 |
| SMAD3 | SMAD family member 3 | -0.0303841 |
| UBE2H | ubiquitin-conjugating enzyme E2H | -0.0301821 |
| PPIB | peptidylprolyl isomerase B (cyclophilin B) | -0.0299103 |
| ANKRD33B | ankyrin repeat domain 33B | -0.0296405 |
| CAV1 | caveolin 1, caveolae protein, 22kDa | -0.0294451 |
| CDC42SE2 | CDC42 small effector 2 | -0.029301 |
| RBFOX2 | RNA binding protein, fox-1 homolog (C. elegans) 2 | -0.0292563 |
| KANSL1 | KAT8 regulatory NSL complex subunit 1 | -0.0290953 |
| RPL11 | ribosomal protein L11 | -0.0287206 |
| RERE | arginine-glutamic acid dipeptide (RE) repeats | -0.028499 |
| LRRFIP1 | leucine rich repeat (in FLII) interacting protein 1 | -0.0284383 |
| PTN | pleiotrophin | -0.0283961 |
| PTPN12 | protein tyrosine phosphatase, non-receptor type 12 | -0.0281831 |
| SKIC3 | SKI3 subunit of superkiller complex | -0.0281215 |
| ZSWIM6 | zinc finger, SWIM-type containing 6 | -0.028063 |
| RACK1 | receptor for activated C kinase 1 | -0.0280572 |
| UBXN4 | UBX domain protein 4 | -0.0279582 |
| LDHA | lactate dehydrogenase A | -0.0277192 |
| CKAP2 | cytoskeleton associated protein 2 | -0.0277163 |
| HOOK2 | hook microtubule-tethering protein 2 | -0.0274279 |
| RAD51B | RAD51 paralog B | -0.027227 |
| JAG1 | jagged 1 | -0.0269816 |
| AKR1B1 | aldo-keto reductase family 1, member B1 (aldose reductase) | -0.0269744 |
| SCAF11 | SR-related CTD-associated factor 11 | -0.0268084 |
| LARGE1 | LARGE xylosyl- and glucuronyltransferase 1 | -0.0266046 |
| G2E3 | G2/M-phase specific E3 ubiquitin protein ligase | -0.0265298 |
| MBNL1 | muscleblind-like splicing regulator 1 | -0.0264818 |
| LRBA | LPS-responsive vesicle trafficking, beach and anchor containing | -0.0264783 |
| CADM1 | cell adhesion molecule 1 | -0.0264575 |
| MAML3 | mastermind-like 3 (Drosophila) | -0.0263238 |
| PDS5B | PDS5 cohesin associated factor B | -0.026261 |
