18β-Glycyrrhetinic acid_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 18β-Glycyrrhetinic acid perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 18β-Glycyrrhetinic acid_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTL ferritin, light polypeptide 0.0899452
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0681149
ZEB1 zinc finger E-box binding homeobox 1 0.0673
FLNB filamin B, beta 0.0665974
HMGA1 high mobility group AT-hook 1 0.0651322
TMSB10 thymosin beta 10 0.0617063
RPS12 ribosomal protein S12 0.0599442
RPS17 ribosomal protein S17 0.0550604
RACK1 receptor for activated C kinase 1 0.0529902
FOSL1 FOS-like antigen 1 0.0475763
PDE4D phosphodiesterase 4D, cAMP-specific 0.0459401
ZFP36L1 ZFP36 ring finger protein-like 1 0.0448852
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0435408
TIMP1 TIMP metallopeptidase inhibitor 1 0.0434327
MCTP1 multiple C2 domains, transmembrane 1 0.0421982
SHANK1 SH3 and multiple ankyrin repeat domains 1 0.0411259
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0410385
LDHA lactate dehydrogenase A 0.0402097
RPL12 ribosomal protein L12 0.040143
MCL1 myeloid cell leukemia 1 0.0390637
RPL23 ribosomal protein L23 0.0384585
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0381786
RPS4X ribosomal protein S4, X-linked 0.0380777
SGMS2 sphingomyelin synthase 2 0.0366126
RPS3 ribosomal protein S3 0.0362385
EEF2 eukaryotic translation elongation factor 2 0.0361074
CD68 CD68 molecule 0.0352979
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0349462
HLA-A major histocompatibility complex, class I, A 0.034879
RPL36 ribosomal protein L36 0.034693
UBXN4 UBX domain protein 4 0.0342405
RPL37 ribosomal protein L37 0.0336292
RPL7 ribosomal protein L7 0.0335669
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0332841
EEF1G eukaryotic translation elongation factor 1 gamma 0.0326757
STC1 stanniocalcin 1 0.0325361
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0317538
CREB5 cAMP responsive element binding protein 5 0.030696
JMJD1C jumonji domain containing 1C 0.0304751
B2M beta-2-microglobulin 0.0299387
MAPK8 mitogen-activated protein kinase 8 0.0299076
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0295596
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0295596
TOR1AIP2 torsin A interacting protein 2 0.0291696
RPL18 ribosomal protein L18 0.0291085
BHLHE40 basic helix-loop-helix family, member e40 0.0290744
S100A11 S100 calcium binding protein A11 0.0289488
CDK17 cyclin-dependent kinase 17 0.028785
GLRX glutaredoxin (thioltransferase) 0.0286033
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0284203
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0277163
YBX3 Y box binding protein 3 0.0273239
RPL37A ribosomal protein L37a 0.0270683
CAPRIN2 caprin family member 2 0.0269938
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0268982
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0267998
RSRC2 arginine/serine-rich coiled-coil 2 0.0264053
BIRC2 baculoviral IAP repeat containing 2 0.0261955
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.026169
LIMA1 LIM domain and actin binding 1 0.0261438
KLF6 Kruppel-like factor 6 0.0257029
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0256057
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.025602
CD44 CD44 molecule (Indian blood group) 0.0255816
RPS2 ribosomal protein S2 0.0255707
PSD3 pleckstrin and Sec7 domain containing 3 0.0252166
ELL2 elongation factor, RNA polymerase II, 2 0.0250079
RO60 Ro60, Y RNA binding protein 0.0248808
EFL1 elongation factor like GTPase 1 0.0247629
FAM13A family with sequence similarity 13, member A 0.0246738
RPL11 ribosomal protein L11 0.0242077
SFPQ splicing factor proline/glutamine-rich 0.0239397
LOC112694756 uncharaterized LOC112694756 0.0238954
EXT1 exostosin glycosyltransferase 1 0.0232249
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 0.0231903
BCAS3 breast carcinoma amplified sequence 3 0.0231392
AKAP9 A kinase (PRKA) anchor protein 9 0.0230772
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0222643
RPL32 ribosomal protein L32 0.0221049
DUSP6 dual specificity phosphatase 6 0.0220627
TUT7 terminal uridylyl transferase 7 0.0219478
JUN jun proto-oncogene 0.021812
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0218028
AKAP12 A kinase (PRKA) anchor protein 12 0.0217564
IER2 immediate early response 2 0.0217478
CCDC88A coiled-coil domain containing 88A 0.021732
GPHN gephyrin 0.0216479
C6ORF62 chromosome 6 open reading frame 62 0.0216305
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0215781
CBX3 chromobox homolog 3 0.0215083
PFN1 profilin 1 0.0213909
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0212266
DOCK5 dedicator of cytokinesis 5 0.0211069
ZBTB38 zinc finger and BTB domain containing 38 0.0207412
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0206067
EML4 echinoderm microtubule associated protein like 4 0.0204973
ANXA5 annexin A5 0.0202441
RPS14 ribosomal protein S14 0.0202225
EGR1 early growth response 1 0.0201846
ANGPTL4 angiopoietin-like 4 0.0199047

decreased expression

Symbol Name Standardized Value
DLC1 DLC1 Rho GTPase activating protein -0.178568
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.166951
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.127108
RPL35A ribosomal protein L35a -0.124475
PTMA prothymosin, alpha -0.10704
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0904291
RPLP1 ribosomal protein, large, P1 -0.0742734
RPS8 ribosomal protein S8 -0.0647172
TTR transthyretin -0.0625928
CANX calnexin -0.0569884
RPL7A ribosomal protein L7a -0.0558793
KPNB1 karyopherin (importin) beta 1 -0.0536528
PTK2 protein tyrosine kinase 2 -0.0517385
RPS20 ribosomal protein S20 -0.0497516
RPLP2 ribosomal protein, large, P2 -0.0474141
RPL34 ribosomal protein L34 -0.0444163
ACTG1 actin gamma 1 -0.0443313
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.044088
RAB3IP RAB3A interacting protein -0.0439717
RRBP1 ribosome binding protein 1 -0.042956
RPS24 ribosomal protein S24 -0.0423915
PCNX4 pecanex 4 -0.0422182
PDIA3 protein disulfide isomerase family A, member 3 -0.0420854
NABP1 nucleic acid binding protein 1 -0.0414289
RAD21 RAD21 homolog (S. pombe) -0.0407562
NAV3 neuron navigator 3 -0.0399863
RPS29 ribosomal protein S29 -0.0398075
RPS21 ribosomal protein S21 -0.0392758
RPL38 ribosomal protein L38 -0.0386948
NUDCD1 NudC domain containing 1 -0.038216
APP amyloid beta (A4) precursor protein -0.037679
FAF1 Fas (TNFRSF6) associated factor 1 -0.0367031
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0360464
RPS25 ribosomal protein S25 -0.0359109
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0356381
RPL39 ribosomal protein L39 -0.0349944
RPL8 ribosomal protein L8 -0.0346971
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0341948
SAMD4A sterile alpha motif domain containing 4A -0.0339697
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa -0.0336629
MKI67 marker of proliferation Ki-67 -0.0336297
PARD3 par-3 family cell polarity regulator -0.0329841
RPL14 ribosomal protein L14 -0.0326401
MTAP methylthioadenosine phosphorylase -0.0326213
SNX14 sorting nexin 14 -0.0313817
TRIO trio Rho guanine nucleotide exchange factor -0.0313077
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0312808
NAV2 neuron navigator 2 -0.0311226
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0307127
GNAS GNAS complex locus -0.0305552
RIGI RNA sensor RIG-I -0.030385
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0301169
KIF5B kinesin family member 5B -0.0300136
NSD3 nuclear receptor binding SET domain protein 3 -0.0299981
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0297469
SMC4 structural maintenance of chromosomes 4 -0.0296637
LAMB3 laminin, beta 3 -0.0288424
TBC1D22A TBC1 domain family, member 22A -0.028349
WAC WW domain containing adaptor with coiled-coil -0.0278616
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.027756
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0276476
RPL13A ribosomal protein L13a -0.027364
DEK DEK proto-oncogene -0.0272441
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0270996
LPP LIM domain containing preferred translocation partner in lipoma -0.0270614
AHNAK AHNAK nucleoprotein -0.0268401
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0266294
VCL vinculin -0.0266177
CALU calumenin -0.026578
FRMD6 FERM domain containing 6 -0.0263825
RPS16 ribosomal protein S16 -0.0263439
BZW1 basic leucine zipper and W2 domains 1 -0.0262056
CALD1 caldesmon 1 -0.0261493
ANKRD11 ankyrin repeat domain 11 -0.0261022
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0257934
TPM4 tropomyosin 4 -0.0254075
BNC2 basonuclin 2 -0.0251103
SP100 SP100 nuclear antigen -0.0250887
PSMB7 proteasome (prosome, macropain) subunit, beta type, 7 -0.0248191
RAN RAN, member RAS oncogene family -0.0247823
CUX1 cut-like homeobox 1 -0.0245703
DIAPH3 diaphanous-related formin 3 -0.0240906
CDK12 cyclin-dependent kinase 12 -0.023812
RPS6 ribosomal protein S6 -0.0237482
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0237185
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0236252
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0234611
ASPH aspartate beta-hydroxylase -0.0234511
TBCA tubulin folding cofactor A -0.0234504
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0232847
UBE2K ubiquitin-conjugating enzyme E2K -0.0232237
FNDC3B fibronectin type III domain containing 3B -0.0230668
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.023063
NSD2 nuclear receptor binding SET domain protein 2 -0.0230622
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit -0.0228157
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0227351
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0227326
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0226219
IFI16 interferon, gamma-inducible protein 16 -0.0225977
KDM3A lysine (K)-specific demethylase 3A -0.0224539