18β-Glycyrrhetinic acid_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 18β-Glycyrrhetinic acid perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 18β-Glycyrrhetinic acid_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.164076
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.157368
NLGN1 neuroligin 1 0.13071
B2M beta-2-microglobulin 0.0809644
NRG3 neuregulin 3 0.0803867
IGFBP3 insulin-like growth factor binding protein 3 0.0655129
RPS3 ribosomal protein S3 0.0628568
RAD51B RAD51 paralog B 0.0608521
AKAP12 A kinase (PRKA) anchor protein 12 0.0607138
LSAMP limbic system-associated membrane protein 0.0606183
IFI6 interferon, alpha-inducible protein 6 0.0604112
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0599246
RPS6 ribosomal protein S6 0.059107
ANGPTL4 angiopoietin-like 4 0.058475
CBX3 chromobox homolog 3 0.0576917
RPS12 ribosomal protein S12 0.0478349
SFTPA2 surfactant protein A2 0.0471174
ENO2 enolase 2 (gamma, neuronal) 0.0448552
HLA-A major histocompatibility complex, class I, A 0.0443052
IFI44L interferon-induced protein 44-like 0.0434831
MT2A metallothionein 2A 0.0434334
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0428784
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0406028
RPL37A ribosomal protein L37a 0.0384538
CDK6 cyclin-dependent kinase 6 0.0379182
FTL ferritin, light polypeptide 0.0376825
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0376518
MAML3 mastermind-like 3 (Drosophila) 0.0372411
DST dystonin 0.0370404
TMSB10 thymosin beta 10 0.0370253
NAP1L1 nucleosome assembly protein 1-like 1 0.0363458
MSN moesin 0.0359656
RPL35A ribosomal protein L35a 0.0355713
CYB5R3 cytochrome b5 reductase 3 0.0349478
RPL11 ribosomal protein L11 0.0349228
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0346602
TAGLN2 transgelin 2 0.0333866
SP100 SP100 nuclear antigen 0.0330587
SOX10 SRY (sex determining region Y)-box 10 0.0323887
VEGFA vascular endothelial growth factor A 0.0314847
RNF213 ring finger protein 213 0.0312488
RPL31 ribosomal protein L31 0.0312291
RPS14 ribosomal protein S14 0.0311421
IFITM3 interferon induced transmembrane protein 3 0.0311247
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0308797
RPL27 ribosomal protein L27 0.0303938
TPI1 triosephosphate isomerase 1 0.0293163
RPS19 ribosomal protein S19 0.0293005
RPL36 ribosomal protein L36 0.0289887
RPL23 ribosomal protein L23 0.0288439
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0285887
CFAP20DC CFAP20 domain containing 0.0283108
POTEF POTE ankyrin domain family, member F 0.0282371
JMJD1C jumonji domain containing 1C 0.0282066
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0280443
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0279249
HLA-B major histocompatibility complex, class I, B 0.0272096
IFI16 interferon, gamma-inducible protein 16 0.0266621
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0265575
LDHA lactate dehydrogenase A 0.0265197
S100A9 S100 calcium binding protein A9 0.0265173
FHIT fragile histidine triad 0.0264893
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0261318
ASPH aspartate beta-hydroxylase 0.0257231
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0256224
CADM1 cell adhesion molecule 1 0.0250853
LEF1 lymphoid enhancer-binding factor 1 0.0250376
FGGY FGGY carbohydrate kinase domain containing 0.0247222
RPS4X ribosomal protein S4, X-linked 0.0245413
PRRC2C proline-rich coiled-coil 2C 0.0244003
PRAME preferentially expressed antigen in melanoma 0.0241704
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0241187
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0240086
PA2G4 proliferation-associated 2G4, 38kDa 0.0238132
SON SON DNA binding protein 0.023518
RPL9 ribosomal protein L9 0.0234026
CNKSR3 CNKSR family member 3 0.0230404
PHF14 PHD finger protein 14 0.0226215
LIMS1 LIM and senescent cell antigen-like domains 1 0.0224552
KTN1 kinectin 1 (kinesin receptor) 0.0219115
PTMA prothymosin, alpha 0.0218441
ARHGAP5 Rho GTPase activating protein 5 0.021447
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa 0.021416
ZNF462 zinc finger protein 462 0.0213164
NRP2 neuropilin 2 0.0212938
RPS17 ribosomal protein S17 0.0212778
PTK2 protein tyrosine kinase 2 0.0212155
LRMDA leucine rich melanocyte differentiation associated 0.0211858
PHF21A PHD finger protein 21A 0.0210474
DPY19L1 dpy-19-like 1 (C. elegans) 0.0208842
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.0207197
HMGA1 high mobility group AT-hook 1 0.0206271
RPL37 ribosomal protein L37 0.0205622
RPLP2 ribosomal protein, large, P2 0.0205606
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0202896
GRID2 glutamate receptor, ionotropic, delta 2 0.0202549
ISG15 ISG15 ubiquitin-like modifier 0.0201301
FOXP1 forkhead box P1 0.0200975
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0200444
MBNL1 muscleblind-like splicing regulator 1 0.0199077

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.296243
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.143546
UBC ubiquitin C -0.120013
CANX calnexin -0.0957294
FMN1 formin 1 -0.0813616
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0774631
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0754143
TXNRD1 thioredoxin reductase 1 -0.07251
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0677622
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0623722
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0586977
SQSTM1 sequestosome 1 -0.0544818
EEF2 eukaryotic translation elongation factor 2 -0.0519525
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0518846
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0516785
GOLGA4 golgin A4 -0.0492952
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.047878
ELL2 elongation factor, RNA polymerase II, 2 -0.0463094
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0458871
KDM3A lysine (K)-specific demethylase 3A -0.0440733
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 -0.042356
SPAG9 sperm associated antigen 9 -0.0421344
CALU calumenin -0.0419268
ACTG1 actin gamma 1 -0.0414307
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0392351
MAP4 microtubule-associated protein 4 -0.0389194
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0387281
ZFAND3 zinc finger, AN1-type domain 3 -0.0387265
TM4SF1 transmembrane 4 L six family member 1 -0.0381199
ICAM1 intercellular adhesion molecule 1 -0.0379316
OXSR1 oxidative stress responsive 1 -0.0374688
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0362797
EMP1 epithelial membrane protein 1 -0.0357941
EP300 E1A binding protein p300 -0.0357255
ANLN anillin, actin binding protein -0.0351067
MYH9 myosin, heavy chain 9, non-muscle -0.034924
NAV2 neuron navigator 2 -0.0346493
SREBF2 sterol regulatory element binding transcription factor 2 -0.0341992
CALR calreticulin -0.0341716
LOC112694756 uncharaterized LOC112694756 -0.0338953
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0335725
PDIA3 protein disulfide isomerase family A, member 3 -0.0334695
CAMTA1 calmodulin binding transcription activator 1 -0.0325144
RB1CC1 RB1-inducible coiled-coil 1 -0.0321318
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0320109
SENP5 SUMO1/sentrin specific peptidase 5 -0.0317613
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0317478
AFF4 AF4/FMR2 family, member 4 -0.0315424
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 -0.0314552
VIM vimentin -0.0313051
HDLBP high density lipoprotein binding protein -0.031125
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0305867
RPS27A ribosomal protein S27a -0.0304814
TPM3 tropomyosin 3 -0.0298324
WAC WW domain containing adaptor with coiled-coil -0.0296019
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0293935
OGA O-GlcNAcase -0.0292901
STK10 serine/threonine kinase 10 -0.0288741
TCF20 transcription factor 20 (AR1) -0.0286449
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0285108
RAB7A RAB7A, member RAS oncogene family -0.0281286
RAD21 RAD21 homolog (S. pombe) -0.028043
ERBIN erbb2 interacting protein -0.0279789
PUM2 pumilio RNA-binding family member 2 -0.027687
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0275387
AHNAK AHNAK nucleoprotein -0.027392
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0273462
CLINT1 clathrin interactor 1 -0.0273242
RBM39 RNA binding motif protein 39 -0.0271755
DLG1 discs, large homolog 1 (Drosophila) -0.0267235
ANXA2 annexin A2 -0.0264888
IFRD1 interferon-related developmental regulator 1 -0.0263637
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0263594
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0260533
COG5 component of oligomeric golgi complex 5 -0.0259163
STK4 serine/threonine kinase 4 -0.0258858
GOLGB1 golgin B1 -0.0258587
FAM13B family with sequence similarity 13, member B -0.0257136
LAMP2 lysosomal-associated membrane protein 2 -0.0255878
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -0.0255207
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0255119
GARS1 glycyl-tRNA synthetase 1 -0.0253134
RHOA ras homolog family member A -0.0249726
FLNA filamin A, alpha -0.0249491
NF1 neurofibromin 1 -0.0248771
FBXL2 F-box and leucine-rich repeat protein 2 -0.0246833
TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough -0.0246154
CLIC4 chloride intracellular channel 4 -0.0245475
RASAL2 RAS protein activator like 2 -0.0237431
ADAM17 ADAM metallopeptidase domain 17 -0.0235047
FOXJ3 forkhead box J3 -0.0233748
DENND4A DENN/MADD domain containing 4A -0.0233153
ACBD3 acyl-CoA binding domain containing 3 -0.0232278
TFG TRK-fused gene -0.0231935
CD44 CD44 molecule (Indian blood group) -0.0231584
RPL4 ribosomal protein L4 -0.0230871
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.02304
VMP1 vacuole membrane protein 1 -0.0229342
PRELID2 PRELI domain containing 2 -0.022811
RLF rearranged L-myc fusion -0.0228071