4EGI-1_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PALM2AKAP2 PALM2 and AKAP2 fusion 0.13454
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.104006
AHNAK2 AHNAK nucleoprotein 2 0.079904
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0624783
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0618217
NAV2 neuron navigator 2 0.0610698
HDAC9 histone deacetylase 9 0.0545984
B2M beta-2-microglobulin 0.0469479
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0467191
PBX3 pre-B-cell leukemia homeobox 3 0.046668
EEF2 eukaryotic translation elongation factor 2 0.0464569
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.046337
CD44 CD44 molecule (Indian blood group) 0.0459682
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0456198
APP amyloid beta (A4) precursor protein 0.0440018
AUTS2 autism susceptibility candidate 2 0.0423384
RHOBTB3 Rho-related BTB domain containing 3 0.0411129
RND3 Rho family GTPase 3 0.0410217
SQSTM1 sequestosome 1 0.0407327
DOCK5 dedicator of cytokinesis 5 0.0393269
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0383118
FBXL7 F-box and leucine-rich repeat protein 7 0.0348132
CTSB cathepsin B 0.0343244
GLIS3 GLIS family zinc finger 3 0.0325639
JMJD1C jumonji domain containing 1C 0.0320709
SMYD3 SET and MYND domain containing 3 0.0314856
OPTN optineurin 0.0306682
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0301332
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0296475
ERBIN erbb2 interacting protein 0.0289709
MMP12 matrix metallopeptidase 12 0.0286136
AKAP9 A kinase (PRKA) anchor protein 9 0.0282851
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0273866
SFTPA2 surfactant protein A2 0.0266958
DSG2 desmoglein 2 0.0266579
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.026475
SLC39A11 solute carrier family 39, member 11 0.0260956
GPC6 glypican 6 0.0259835
BCL2L1 BCL2-like 1 0.0251515
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0245887
RABGAP1L RAB GTPase activating protein 1-like 0.0237149
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0236305
NPC1 Niemann-Pick disease, type C1 0.0236129
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0234851
ANXA5 annexin A5 0.0233079
CDH13 cadherin 13 0.0229415
FTH1 ferritin, heavy polypeptide 1 0.0224506
CAPN2 calpain 2, (m/II) large subunit 0.0224219
PRKCE protein kinase C, epsilon 0.0219971
TM4SF19 transmembrane 4 L six family member 19 0.0216929
EIF1 eukaryotic translation initiation factor 1 0.021611
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.021577
RPS3 ribosomal protein S3 0.0213057
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0212876
ANO6 anoctamin 6 0.0207362
LNPEP leucyl/cystinyl aminopeptidase 0.0203497
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0202585
TM4SF1 transmembrane 4 L six family member 1 0.02019
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0199882
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0198065
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.019733
DOCK9 dedicator of cytokinesis 9 0.0197072
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0196622
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0196463
CLIP2 CAP-GLY domain containing linker protein 2 0.0195343
RPS2 ribosomal protein S2 0.0193988
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0193011
PCM1 pericentriolar material 1 0.0190348
BPTF bromodomain PHD finger transcription factor 0.0187805
STC1 stanniocalcin 1 0.0187588
RASA2 RAS p21 protein activator 2 0.0185845
SMAD3 SMAD family member 3 0.0185729
FMNL2 formin-like 2 0.018378
LIMS1 LIM and senescent cell antigen-like domains 1 0.0181901
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0181501
TBC1D5 TBC1 domain family, member 5 0.0181297
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0181087
ANKRD11 ankyrin repeat domain 11 0.0179366
BACE2 beta-site APP-cleaving enzyme 2 0.0179154
MCTP1 multiple C2 domains, transmembrane 1 0.0178308
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.017773
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0176408
NLGN4Y neuroligin 4, Y-linked 0.0173944
MT2A metallothionein 2A 0.0173755
AXL AXL receptor tyrosine kinase 0.0173169
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0172827
LPP LIM domain containing preferred translocation partner in lipoma 0.0171636
CENPF centromere protein F, 350/400kDa 0.0170787
CSTB cystatin B (stefin B) 0.0169719
DSPP dentin sialophosphoprotein 0.0169242
FNIP1 folliculin interacting protein 1 0.016243
ANKRD36 ankyrin repeat domain 36 0.016156
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0161469
BCAR3 breast cancer anti-estrogen resistance 3 0.0157724
ZEB1 zinc finger E-box binding homeobox 1 0.015681
DNMBP dynamin binding protein 0.0156607
MYH9 myosin, heavy chain 9, non-muscle 0.0156395
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0155749
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0154238
RICTOR RPTOR independent companion of MTOR, complex 2 0.0153106

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.306787
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.226052
COL5A1 collagen, type V, alpha 1 -0.192219
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.184127
TMSB10 thymosin beta 10 -0.163756
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.160803
COL8A1 collagen, type VIII, alpha 1 -0.156689
LOX lysyl oxidase -0.135013
DLG1 discs, large homolog 1 (Drosophila) -0.12038
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.115159
AKAP12 A kinase (PRKA) anchor protein 12 -0.107085
FN1 fibronectin 1 -0.101215
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0988278
ABI3BP ABI family, member 3 (NESH) binding protein -0.0962608
VIM vimentin -0.0907595
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0878572
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0862933
AHNAK AHNAK nucleoprotein -0.0848712
SUCNR1 succinate receptor 1 -0.067395
PRSS23 protease, serine, 23 -0.0673202
NAV1 neuron navigator 1 -0.0672842
SAMD9 sterile alpha motif domain containing 9 -0.0659215
MAP1B microtubule-associated protein 1B -0.0624069
LMNA lamin A/C -0.061863
TRIO trio Rho guanine nucleotide exchange factor -0.0616865
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0595197
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0578693
DCLK2 doublecortin-like kinase 2 -0.0571289
CANX calnexin -0.0567267
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0567259
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0561741
MX2 MX dynamin-like GTPase 2 -0.0561669
COL1A2 collagen, type I, alpha 2 -0.055028
FBN1 fibrillin 1 -0.0543368
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0537769
SLC38A1 solute carrier family 38, member 1 -0.0531913
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0530349
RIGI RNA sensor RIG-I -0.0484017
PDE4D phosphodiesterase 4D, cAMP-specific -0.0460344
TAGLN2 transgelin 2 -0.0454661
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0447561
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0443175
POTEF POTE ankyrin domain family, member F -0.0440853
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0434796
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0427531
FLNB filamin B, beta -0.042727
RRBP1 ribosome binding protein 1 -0.0418257
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0408478
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0406517
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0397206
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 -0.0393347
SH3KBP1 SH3-domain kinase binding protein 1 -0.0384728
PKM pyruvate kinase, muscle -0.0383618
COL5A2 collagen, type V, alpha 2 -0.0377367
PGK1 phosphoglycerate kinase 1 -0.0373553
LRRC17 leucine rich repeat containing 17 -0.0357636
LDHA lactate dehydrogenase A -0.0352182
TENM3 teneurin transmembrane protein 3 -0.0348487
COL3A1 collagen, type III, alpha 1 -0.0344712
S100A10 S100 calcium binding protein A10 -0.0344183
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0340931
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0329891
FSTL1 follistatin-like 1 -0.0327194
LDLRAD4 low density lipoprotein receptor class A domain containing 4 -0.0324669
UBC ubiquitin C -0.032259
CUX1 cut-like homeobox 1 -0.0320017
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0316922
TENT5A terminal nucleotidyltransferase 5A -0.0312949
HLA-C major histocompatibility complex, class I, C -0.0311617
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0310345
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0309463
TPM1 tropomyosin 1 (alpha) -0.0308432
RUNX1 runt-related transcription factor 1 -0.0305368
NAP1L1 nucleosome assembly protein 1-like 1 -0.0304334
SPAG9 sperm associated antigen 9 -0.0301415
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0299196
DDR2 discoidin domain receptor tyrosine kinase 2 -0.0298869
WARS1 tryptophanyl-tRNA synthetase 1 -0.0297137
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0295549
IL7R interleukin 7 receptor -0.0292172
LOXL2 lysyl oxidase-like 2 -0.0290943
LOC112694756 uncharaterized LOC112694756 -0.0289554
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.028615
MRPS6 mitochondrial ribosomal protein S6 -0.028517
SP3 Sp3 transcription factor -0.0283784
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0281001
IFI16 interferon, gamma-inducible protein 16 -0.0273603
MEIS2 Meis homeobox 2 -0.0272979
CKAP4 cytoskeleton-associated protein 4 -0.0272901
GARS1 glycyl-tRNA synthetase 1 -0.0270046
ACTN4 actinin, alpha 4 -0.0269661
PSD3 pleckstrin and Sec7 domain containing 3 -0.026806
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0267753
SYTL3 synaptotagmin-like 3 -0.026598
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0265909
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0264844
HLA-B major histocompatibility complex, class I, B -0.0263659
PTMA prothymosin, alpha -0.0263378
PLAT plasminogen activator, tissue -0.0263248
COL1A1 collagen, type I, alpha 1 -0.0261461