4EGI-1_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.194016
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.101072
NLGN1 neuroligin 1 0.0927798
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0872656
HMGA2 high mobility group AT-hook 2 0.0835694
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0807136
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0770327
YAP1 Yes-associated protein 1 0.0707753
RASAL2 RAS protein activator like 2 0.0562274
ASPH aspartate beta-hydroxylase 0.0555119
PDE4D phosphodiesterase 4D, cAMP-specific 0.0540344
PCDH7 protocadherin 7 0.0539298
MMP12 matrix metallopeptidase 12 0.0532798
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0519554
JMJD1C jumonji domain containing 1C 0.0510539
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0509389
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0479533
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0453654
EEF2 eukaryotic translation elongation factor 2 0.0420952
HSPA8 heat shock 70kDa protein 8 0.0401901
MARCHF4 membrane associated ring-CH-type finger 4 0.0394311
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0376084
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0342668
MACF1 microtubule-actin crosslinking factor 1 0.033003
ZSWIM6 zinc finger, SWIM-type containing 6 0.0324885
BIRC3 baculoviral IAP repeat containing 3 0.0315482
IPO7 importin 7 0.031522
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0313082
VMP1 vacuole membrane protein 1 0.0304257
PDGFC platelet derived growth factor C 0.0298277
DST dystonin 0.0279105
ANXA1 annexin A1 0.0277681
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0273161
INTS6 integrator complex subunit 6 0.0270342
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0270027
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0267262
MGAT4C MGAT4 family, member C 0.0264444
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0258248
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0257513
EHBP1 EH domain binding protein 1 0.025205
LPP LIM domain containing preferred translocation partner in lipoma 0.0250583
RAB7A RAB7A, member RAS oncogene family 0.0247031
NEGR1 neuronal growth regulator 1 0.0244558
EDARADD EDAR-associated death domain 0.024014
ZFAND3 zinc finger, AN1-type domain 3 0.0235726
TPM3 tropomyosin 3 0.023107
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0230322
PRDX1 peroxiredoxin 1 0.022888
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0228251
ACTG1 actin gamma 1 0.0227658
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0225942
BCHE butyrylcholinesterase 0.0225205
YBX3 Y box binding protein 3 0.0225031
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0219594
ANKRD12 ankyrin repeat domain 12 0.0218047
LRMDA leucine rich melanocyte differentiation associated 0.0216397
CLTC clathrin, heavy chain (Hc) 0.0212887
ZNF804A zinc finger protein 804A 0.0212221
RIMS2 regulating synaptic membrane exocytosis 2 0.020721
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.020532
TRIO trio Rho guanine nucleotide exchange factor 0.0204891
USP53 ubiquitin specific peptidase 53 0.0200275
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0193408
DENND5A DENN/MADD domain containing 5A 0.0193316
USP9X ubiquitin specific peptidase 9, X-linked 0.0191664
ZEB1 zinc finger E-box binding homeobox 1 0.0189475
FAT1 FAT atypical cadherin 1 0.0189124
SETX senataxin 0.0186189
MSRB3 methionine sulfoxide reductase B3 0.0185593
ADGRG6 adhesion G protein-coupled receptor G6 0.0183998
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.018241
MYPN myopalladin 0.0178472
DPYD dihydropyrimidine dehydrogenase 0.017837
ASXL2 additional sex combs like transcriptional regulator 2 0.0174593
PCDH9 protocadherin 9 0.0172623
HOMER1 homer scaffolding protein 1 0.0170898
RRM2 ribonucleotide reductase M2 0.0169912
PDE4B phosphodiesterase 4B, cAMP-specific 0.0169844
RPS2 ribosomal protein S2 0.0169294
EGFR epidermal growth factor receptor 0.0168483
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0166628
TMCC1 transmembrane and coiled-coil domain family 1 0.0165976
MBD5 methyl-CpG binding domain protein 5 0.0163953
EIF4B eukaryotic translation initiation factor 4B 0.0163492
EPHA5 EPH receptor A5 0.0163283
LGALS12 lectin, galactoside-binding, soluble, 12 0.0162151
L3MBTL4 l(3)mbt-like 4 (Drosophila) 0.0159518
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0157518
DOCK1 dedicator of cytokinesis 1 0.0157464
RCOR1 REST corepressor 1 0.0157076
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0153395
ANKRD17 ankyrin repeat domain 17 0.0152661
FBXL17 F-box and leucine-rich repeat protein 17 0.0151075
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0150827
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0149345
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0148688
EZR ezrin 0.0148236
GJA1 gap junction protein, alpha 1, 43kDa 0.0148051
VIM vimentin 0.0148037
CALR calreticulin 0.0146846

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.111989
PTMA prothymosin, alpha -0.0600957
ATP5F1B ATP synthase F1 subunit beta -0.0478383
MYL12B myosin, light chain 12B, regulatory -0.0434615
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0430595
FTL ferritin, light polypeptide -0.0371425
RPL35A ribosomal protein L35a -0.0338252
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0315083
AREG amphiregulin -0.0297322
HSPB1 heat shock 27kDa protein 1 -0.0276675
KPNB1 karyopherin (importin) beta 1 -0.0273313
CNRIP1 cannabinoid receptor interacting protein 1 -0.0272071
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.026825
RPLP1 ribosomal protein, large, P1 -0.0264571
SMC4 structural maintenance of chromosomes 4 -0.0263963
PFN1 profilin 1 -0.0263928
PTMS parathymosin -0.0230267
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0228831
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0228818
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0224535
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -0.0218878
LDHB lactate dehydrogenase B -0.0216452
KIF5B kinesin family member 5B -0.0212579
RPS21 ribosomal protein S21 -0.0208315
RPS19 ribosomal protein S19 -0.0208249
HMGA1 high mobility group AT-hook 1 -0.0208195
RPL8 ribosomal protein L8 -0.0202319
GNAS GNAS complex locus -0.0194787
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0191847
IFIH1 interferon induced with helicase C domain 1 -0.0188453
RPL36 ribosomal protein L36 -0.0181311
RPL19 ribosomal protein L19 -0.0179317
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0176109
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.0174152
EIF5B eukaryotic translation initiation factor 5B -0.0169811
GARS1 glycyl-tRNA synthetase 1 -0.0169304
THOC2 THO complex 2 -0.0168971
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0168803
CLDN1 claudin 1 -0.0167896
NCOR1 nuclear receptor corepressor 1 -0.0165276
RPS24 ribosomal protein S24 -0.0163546
WDR43 WD repeat domain 43 -0.0155342
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0155303
CBX3 chromobox homolog 3 -0.0153947
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0153936
H1-0 H1.0 linker histone -0.0153861
RPS6 ribosomal protein S6 -0.0153747
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.015326
MARS1 methionyl-tRNA synthetase 1 -0.0152779
SLC38A1 solute carrier family 38, member 1 -0.015246
RPLP2 ribosomal protein, large, P2 -0.0151366
RPL23 ribosomal protein L23 -0.0151149
KDM3A lysine (K)-specific demethylase 3A -0.0148849
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0147034
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0145757
RPS23 ribosomal protein S23 -0.0144649
CCDC88A coiled-coil domain containing 88A -0.0144499
RPL11 ribosomal protein L11 -0.014425
S100A6 S100 calcium binding protein A6 -0.0142771
RPS27A ribosomal protein S27a -0.0142448
RAD21 RAD21 homolog (S. pombe) -0.0142118
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0139443
CXADR coxsackie virus and adenovirus receptor -0.0137714
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0137387
LARS1 leucyl-tRNA synthetase 1 -0.0137298
MAP1B microtubule-associated protein 1B -0.0135485
SYT1 synaptotagmin I -0.0135277
XPO1 exportin 1 -0.0134975
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0134755
ECT2 epithelial cell transforming 2 -0.0134697
BIRC6 baculoviral IAP repeat containing 6 -0.0134169
CPOX coproporphyrinogen oxidase -0.013315
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0132857
SLC38A2 solute carrier family 38, member 2 -0.0132624
VDAC1 voltage-dependent anion channel 1 -0.0132312
CENPE centromere protein E, 312kDa -0.0132194
RPL37A ribosomal protein L37a -0.0132099
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 -0.013169
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0131519
CENPF centromere protein F, 350/400kDa -0.0129345
RPL26 ribosomal protein L26 -0.0128669
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0128485
KIF18B kinesin family member 18B -0.0128392
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 -0.012689
RBM27 RNA binding motif protein 27 -0.0126475
STIL SCL/TAL1 interrupting locus -0.0126248
RPS14 ribosomal protein S14 -0.0124869
FAM162A family with sequence similarity 162, member A -0.0124644
RPS16 ribosomal protein S16 -0.0124404
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -0.0124395
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0123958
LARP1 La ribonucleoprotein domain family, member 1 -0.0123263
AFG3L2 AFG3-like AAA ATPase 2 -0.0122517
UBE2K ubiquitin-conjugating enzyme E2K -0.0122188
PCNP PEST proteolytic signal containing nuclear protein -0.0122188
R3HDM1 R3H domain containing 1 -0.0120971
SMC3 structural maintenance of chromosomes 3 -0.0120543
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.01202
HLA-A major histocompatibility complex, class I, A -0.0119608
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0119578