4EGI-1_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FRMD4A FERM domain containing 4A 0.202244
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.200124
VIM vimentin 0.11936
B2M beta-2-microglobulin 0.119118
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.103742
CD44 CD44 molecule (Indian blood group) 0.092392
NAV2 neuron navigator 2 0.0908404
EEF2 eukaryotic translation elongation factor 2 0.0907795
FTH1 ferritin, heavy polypeptide 1 0.0894552
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0890661
RND3 Rho family GTPase 3 0.08639
MYH9 myosin, heavy chain 9, non-muscle 0.0825103
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0759553
FNDC3B fibronectin type III domain containing 3B 0.073799
VEGFA vascular endothelial growth factor A 0.0710944
DOCK5 dedicator of cytokinesis 5 0.0681421
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0671048
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0627042
AKAP9 A kinase (PRKA) anchor protein 9 0.0608722
ANXA5 annexin A5 0.0582865
EXT1 exostosin glycosyltransferase 1 0.0567217
MYADM myeloid-associated differentiation marker 0.0564541
EGFR epidermal growth factor receptor 0.0550072
PDLIM5 PDZ and LIM domain 5 0.0548386
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0527698
SAMD4A sterile alpha motif domain containing 4A 0.0527101
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0522743
OPTN optineurin 0.0521755
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0521156
LDHA lactate dehydrogenase A 0.0502816
GPC5 glypican 5 0.0494116
TPM3 tropomyosin 3 0.0478152
OSMR oncostatin M receptor 0.0435372
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0422876
SFTPA2 surfactant protein A2 0.0417997
ATP13A3 ATPase type 13A3 0.0410909
ELL2 elongation factor, RNA polymerase II, 2 0.0404542
ICAM1 intercellular adhesion molecule 1 0.0402901
SEPTIN9 septin 9 0.0400353
MT2A metallothionein 2A 0.0391631
EIF1 eukaryotic translation initiation factor 1 0.0389195
MSN moesin 0.0381477
CDCP1 CUB domain containing protein 1 0.0374386
COG5 component of oligomeric golgi complex 5 0.0369949
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0365928
RPS2 ribosomal protein S2 0.0361022
RB1CC1 RB1-inducible coiled-coil 1 0.0358637
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0354985
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0348923
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0345583
SHB Src homology 2 domain containing adaptor protein B 0.0340712
MX1 MX dynamin-like GTPase 1 0.0340525
GPR176 G protein-coupled receptor 176 0.0340171
GOLGB1 golgin B1 0.0339014
MACF1 microtubule-actin crosslinking factor 1 0.0328776
APP amyloid beta (A4) precursor protein 0.0322291
DSPP dentin sialophosphoprotein 0.0317718
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0313
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0311241
CSDE1 cold shock domain containing E1, RNA-binding 0.0310747
TAOK1 TAO kinase 1 0.030205
ADAR adenosine deaminase, RNA-specific 0.030153
MSR1 macrophage scavenger receptor 1 0.0300738
SOD2 superoxide dismutase 2, mitochondrial 0.0296569
PLEC plectin 0.029513
LPP LIM domain containing preferred translocation partner in lipoma 0.029411
RPL3 ribosomal protein L3 0.0293346
BBS9 Bardet-Biedl syndrome 9 0.0283261
ARRDC3 arrestin domain containing 3 0.028256
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0280638
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 0.0279816
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0278104
NRIP1 nuclear receptor interacting protein 1 0.0276612
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0274458
ITSN2 intersectin 2 0.0273758
TMED2 transmembrane emp24 domain trafficking protein 2 0.0271687
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0269657
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0269199
UBC ubiquitin C 0.0266554
RAI14 retinoic acid induced 14 0.0260868
ESYT2 extended synaptotagmin-like protein 2 0.0259709
ALCAM activated leukocyte cell adhesion molecule 0.0259614
HSPA8 heat shock 70kDa protein 8 0.0251748
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0251327
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0250011
LIMS1 LIM and senescent cell antigen-like domains 1 0.0249492
EHBP1 EH domain binding protein 1 0.0249017
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0248876
RPL7 ribosomal protein L7 0.0248149
PLK2 polo-like kinase 2 0.0246874
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 0.0242688
RPL12 ribosomal protein L12 0.0241507
WASL Wiskott-Aldrich syndrome-like 0.024093
JMJD1C jumonji domain containing 1C 0.0239293
ZFAND3 zinc finger, AN1-type domain 3 0.0239233
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0238427
HIPK3 homeodomain interacting protein kinase 3 0.0237334
LYST lysosomal trafficking regulator 0.0236485
PCBP3 poly(rC) binding protein 3 0.0232953
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0232913

decreased expression

Symbol Name Standardized Value
ASPH aspartate beta-hydroxylase -0.263562
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.239974
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0991286
IGFBP3 insulin-like growth factor binding protein 3 -0.0928575
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) -0.0887081
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0868617
RRBP1 ribosome binding protein 1 -0.0815613
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0788395
NAMPT nicotinamide phosphoribosyltransferase -0.0762672
GPC6 glypican 6 -0.0731769
TXNRD1 thioredoxin reductase 1 -0.0720585
TMSB10 thymosin beta 10 -0.0662624
GLIS3 GLIS family zinc finger 3 -0.0585606
CSF1 colony stimulating factor 1 (macrophage) -0.05852
PBX1 pre-B-cell leukemia homeobox 1 -0.0555079
GLS2 glutaminase 2 (liver, mitochondrial) -0.0545291
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0502599
DIAPH3 diaphanous-related formin 3 -0.0496561
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0495472
CP ceruloplasmin (ferroxidase) -0.0477942
TRIO trio Rho guanine nucleotide exchange factor -0.0477738
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0472051
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0467717
IARS1 isoleucyl-tRNA synthetase 1 -0.0457209
FTL ferritin, light polypeptide -0.0455178
PTMA prothymosin, alpha -0.0449372
HSPB1 heat shock 27kDa protein 1 -0.0438895
NFIB nuclear factor I/B -0.0432359
RBM39 RNA binding motif protein 39 -0.0416502
OSBPL3 oxysterol binding protein-like 3 -0.0410067
RAB1A RAB1A, member RAS oncogene family -0.0404668
GNAS GNAS complex locus -0.0382653
ANLN anillin, actin binding protein -0.038001
PTPRD protein tyrosine phosphatase, receptor type, D -0.0379016
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0369623
RRM2 ribonucleotide reductase M2 -0.0367185
RHEB Ras homolog enriched in brain -0.0361958
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0350962
SDCBP syndecan binding protein (syntenin) -0.0350586
HMGB1 high mobility group box 1 -0.0349543
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0341962
PDIA4 protein disulfide isomerase family A, member 4 -0.0340043
RHEX regulator of hemoglobinization and erythroid cell expansion -0.0338553
COL8A1 collagen, type VIII, alpha 1 -0.0334035
MARCHF6 membrane associated ring-CH-type finger 6 -0.0333864
FKBP10 FK506 binding protein 10, 65 kDa -0.0330507
NDRG1 N-myc downstream regulated 1 -0.0322457
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0321598
FUS FUS RNA binding protein -0.0319184
CD70 CD70 molecule -0.031677
UGDH UDP-glucose 6-dehydrogenase -0.0312317
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.030654
NAP1L1 nucleosome assembly protein 1-like 1 -0.0303875
FRMD5 FERM domain containing 5 -0.0301262
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0300574
GCLM glutamate-cysteine ligase, modifier subunit -0.0300504
TMEM263 transmembrane protein 263 -0.0297562
PDE4D phosphodiesterase 4D, cAMP-specific -0.0297173
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0297147
TPST1 tyrosylprotein sulfotransferase 1 -0.0293283
TRA2A transformer 2 alpha homolog (Drosophila) -0.0292341
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0291606
DDIT4 DNA-damage-inducible transcript 4 -0.0290706
DENND2B DENN domain containing 2B -0.0290063
CCL2 chemokine (C-C motif) ligand 2 -0.0282871
TCEA1 transcription elongation factor A (SII), 1 -0.0282591
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0279157
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0278424
CKAP4 cytoskeleton-associated protein 4 -0.0275607
ARHGAP29 Rho GTPase activating protein 29 -0.0273647
PFN1 profilin 1 -0.027265
GARS1 glycyl-tRNA synthetase 1 -0.0272491
SMC4 structural maintenance of chromosomes 4 -0.0271641
DLG1 discs, large homolog 1 (Drosophila) -0.0270829
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0269776
GDF15 growth differentiation factor 15 -0.0268244
LMAN1 lectin, mannose-binding, 1 -0.0267483
CAVIN1 caveolae associated protein 1 -0.0266328
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0266184
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.0264409
ANKRD11 ankyrin repeat domain 11 -0.026246
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0259739
ATP5F1B ATP synthase F1 subunit beta -0.0259485
HKDC1 hexokinase domain containing 1 -0.0258698
ANKRD10 ankyrin repeat domain 10 -0.0258629
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0255765
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.0254209
ANXA4 annexin A4 -0.0252602
ACTN4 actinin, alpha 4 -0.0251929
PTGR1 prostaglandin reductase 1 -0.0251585
CBX3 chromobox homolog 3 -0.0249222
NOP58 NOP58 ribonucleoprotein -0.0249124
HMGB2 high mobility group box 2 -0.0248886
MAP1B microtubule-associated protein 1B -0.0248646
TARS1 threonyl-tRNA synthetase 1 -0.0247003
ACACA acetyl-CoA carboxylase alpha -0.0246631
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0244305
LDHB lactate dehydrogenase B -0.0241294
LAPTM4A lysosomal protein transmembrane 4 alpha -0.0238794
MORF4L2 mortality factor 4 like 2 -0.0238622