4EGI-1_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MEST mesoderm specific transcript 0.371589
EEF2 eukaryotic translation elongation factor 2 0.147845
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.130761
VIM vimentin 0.124348
PABPC1 poly(A) binding protein, cytoplasmic 1 0.097347
VEGFA vascular endothelial growth factor A 0.0958961
TSHZ2 teashirt zinc finger homeobox 2 0.089912
HMGA2 high mobility group AT-hook 2 0.0769559
CADM2 cell adhesion molecule 2 0.0755454
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0664756
ENO1 enolase 1, (alpha) 0.0660078
PDE4D phosphodiesterase 4D, cAMP-specific 0.0636361
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0622619
TRIO trio Rho guanine nucleotide exchange factor 0.0618669
UTRN utrophin 0.056703
PDE4B phosphodiesterase 4B, cAMP-specific 0.0546155
ZFAND3 zinc finger, AN1-type domain 3 0.0538592
SAMD4A sterile alpha motif domain containing 4A 0.0526327
FBXL17 F-box and leucine-rich repeat protein 17 0.0510998
UBC ubiquitin C 0.0497835
GSE1 Gse1 coiled-coil protein 0.0497683
EGFR epidermal growth factor receptor 0.0489101
LPP LIM domain containing preferred translocation partner in lipoma 0.048783
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0441377
METTL15 methyltransferase like 15 0.0436894
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0420067
ZBTB20 zinc finger and BTB domain containing 20 0.0403857
FER fer (fps/fes related) tyrosine kinase 0.0398272
RPS2 ribosomal protein S2 0.0390708
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.038572
TSC22D1 TSC22 domain family, member 1 0.0378088
TBC1D5 TBC1 domain family, member 5 0.0370634
BCAS3 breast carcinoma amplified sequence 3 0.0369043
SFPQ splicing factor proline/glutamine-rich 0.0364683
PCDH7 protocadherin 7 0.0361412
PRKN parkin RBR E3 ubiquitin protein ligase 0.0349576
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0344042
EGR1 early growth response 1 0.0334965
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0330776
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae) 0.0327633
VCL vinculin 0.032598
MACF1 microtubule-actin crosslinking factor 1 0.0325451
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0325035
EXT1 exostosin glycosyltransferase 1 0.0324739
MYOF myoferlin 0.0322552
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0315636
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0313944
GPHN gephyrin 0.0313393
BTBD9 BTB (POZ) domain containing 9 0.0311462
RPL3 ribosomal protein L3 0.0308051
RACK1 receptor for activated C kinase 1 0.0302566
RPS4X ribosomal protein S4, X-linked 0.0302341
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0302288
MSRB3 methionine sulfoxide reductase B3 0.0301793
DST dystonin 0.0299808
VMP1 vacuole membrane protein 1 0.0299429
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0296651
SFTPA2 surfactant protein A2 0.0292861
DOCK1 dedicator of cytokinesis 1 0.0289299
SEM1 SEM1 26S proteasome subunit 0.0288685
PPP1R9A protein phosphatase 1, regulatory subunit 9A 0.0283472
LIMS1 LIM and senescent cell antigen-like domains 1 0.0278377
COPA coatomer protein complex, subunit alpha 0.0274971
THSD4 thrombospondin, type I, domain containing 4 0.0273263
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0268826
EXOC6B exocyst complex component 6B 0.0268776
KCNE4 potassium channel, voltage gated subfamily E regulatory beta subunit 4 0.0268568
AGO3 argonaute RISC catalytic component 3 0.0266468
RAD51B RAD51 paralog B 0.0264792
RPS12 ribosomal protein S12 0.0263909
POTEF POTE ankyrin domain family, member F 0.0262949
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.0261847
PKM pyruvate kinase, muscle 0.0260974
PCBP2 poly(rC) binding protein 2 0.0259897
SIK3 SIK family kinase 3 0.0258839
MED13 mediator complex subunit 13 0.0257306
THBS1 thrombospondin 1 0.0255727
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0255075
LGALS12 lectin, galactoside-binding, soluble, 12 0.0254933
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0253824
GMDS GDP-mannose 4,6-dehydratase 0.0251315
FOXP1 forkhead box P1 0.0248874
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0248295
FBXL7 F-box and leucine-rich repeat protein 7 0.0244083
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0243026
CLIC4 chloride intracellular channel 4 0.024289
TIAM2 T-cell lymphoma invasion and metastasis 2 0.0242264
ZFP36L1 ZFP36 ring finger protein-like 1 0.0237426
CDK6 cyclin-dependent kinase 6 0.0237131
INTS6 integrator complex subunit 6 0.023357
MYO9A myosin IXA 0.0232634
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0230463
BPTF bromodomain PHD finger transcription factor 0.0230233
EEF1G eukaryotic translation elongation factor 1 gamma 0.0230196
ITGAV integrin, alpha V 0.0229547
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0229248
PARD3 par-3 family cell polarity regulator 0.0228149
SOS1 son of sevenless homolog 1 (Drosophila) 0.0227997
ALCAM activated leukocyte cell adhesion molecule 0.0227934
ELOVL5 ELOVL fatty acid elongase 5 0.0226931

decreased expression

Symbol Name Standardized Value
PEG10 paternally expressed 10 -0.146124
CENPF centromere protein F, 350/400kDa -0.0935147
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0744763
PRKG1 protein kinase, cGMP-dependent, type I -0.0654405
NFIB nuclear factor I/B -0.0575977
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0566852
MGP matrix Gla protein -0.0553513
PTMA prothymosin, alpha -0.054406
ZFHX3 zinc finger homeobox 3 -0.053007
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0523577
ZEB1 zinc finger E-box binding homeobox 1 -0.0489591
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0449199
WSB1 WD repeat and SOCS box containing 1 -0.0447448
FGFR1 fibroblast growth factor receptor 1 -0.0445568
MTUS1 microtubule associated tumor suppressor 1 -0.0430961
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0409472
COL1A2 collagen, type I, alpha 2 -0.0403422
SMC4 structural maintenance of chromosomes 4 -0.0401923
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.040028
FLNB filamin B, beta -0.0394177
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0393072
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.037556
FNDC3B fibronectin type III domain containing 3B -0.0375469
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0368774
KIF20B kinesin family member 20B -0.0368459
PIAS2 protein inhibitor of activated STAT, 2 -0.0355744
SOBP sine oculis binding protein homolog (Drosophila) -0.0345541
MARCHF6 membrane associated ring-CH-type finger 6 -0.034367
IGF2R insulin-like growth factor 2 receptor -0.0335885
TPK1 thiamin pyrophosphokinase 1 -0.0329188
RNF130 ring finger protein 130 -0.0328341
MEOX2 mesenchyme homeobox 2 -0.0323475
SPRY4 sprouty homolog 4 (Drosophila) -0.0320011
NAMPT nicotinamide phosphoribosyltransferase -0.0318168
RSU1 Ras suppressor protein 1 -0.0317111
PRLR prolactin receptor -0.0309905
LCORL ligand dependent nuclear receptor corepressor-like -0.0309608
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0306661
NFIA nuclear factor I/A -0.0306498
KPNB1 karyopherin (importin) beta 1 -0.0305906
NDFIP1 Nedd4 family interacting protein 1 -0.0305367
MED13L mediator complex subunit 13-like -0.0303359
TET2 tet methylcytosine dioxygenase 2 -0.0301234
DIAPH3 diaphanous-related formin 3 -0.029934
TMEM41B transmembrane protein 41B -0.0296275
RBM25 RNA binding motif protein 25 -0.0291125
SEPTIN7 septin 7 -0.0289292
RHEB Ras homolog enriched in brain -0.0286896
RPL35A ribosomal protein L35a -0.0284472
HELZ helicase with zinc finger -0.0282909
QKI QKI, KH domain containing, RNA binding -0.0282757
TENT4A terminal nucleotidyltransferase 4A -0.0281607
PLS3 plastin 3 -0.028036
INSIG2 insulin induced gene 2 -0.0279611
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0278968
SEPTIN11 septin 11 -0.0278841
TRA2A transformer 2 alpha homolog (Drosophila) -0.027778
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0276561
KDM5B lysine (K)-specific demethylase 5B -0.027613
IER3 immediate early response 3 -0.0275611
PUM2 pumilio RNA-binding family member 2 -0.0273333
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0272743
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 -0.0263806
TTC3 tetratricopeptide repeat domain 3 -0.0263503
CENPE centromere protein E, 312kDa -0.0261154
KMT2E lysine (K)-specific methyltransferase 2E -0.0260257
CREM cAMP responsive element modulator -0.0259109
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0258753
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0257423
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0254683
TMSB10 thymosin beta 10 -0.0252734
TET1 tet methylcytosine dioxygenase 1 -0.0248176
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0247756
ACACA acetyl-CoA carboxylase alpha -0.0246866
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0246067
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0246013
PTPRF protein tyrosine phosphatase, receptor type, F -0.0244901
HMGB2 high mobility group box 2 -0.0244535
KIF11 kinesin family member 11 -0.0243986
NHSL1 NHS-like 1 -0.0242224
GAS2L3 growth arrest-specific 2 like 3 -0.0239876
JAM3 junctional adhesion molecule 3 -0.0239211
PGK1 phosphoglycerate kinase 1 -0.0237311
GNG2 guanine nucleotide binding protein (G protein), gamma 2 -0.0236891
MTDH metadherin -0.0236307
PRELID2 PRELI domain containing 2 -0.0234796
KDM3A lysine (K)-specific demethylase 3A -0.0232194
CLMP CXADR-like membrane protein -0.023153
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 -0.0227215
MAP1B microtubule-associated protein 1B -0.0224454
RBM27 RNA binding motif protein 27 -0.0223319
ATP6V0E1 ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 -0.0221979
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0221636
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0221212
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0220471
FKBP10 FK506 binding protein 10, 65 kDa -0.0219422
BUB3 BUB3 mitotic checkpoint protein -0.0218673
RFX7 regulatory factor X, 7 -0.0217789
BRD8 bromodomain containing 8 -0.0217553
RRBP1 ribosome binding protein 1 -0.0217552