4EGI-1_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.231089
EXT1 exostosin glycosyltransferase 1 0.201318
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.154132
MYH14 myosin, heavy chain 14, non-muscle 0.120648
TJP1 tight junction protein 1 0.11698
SMAD3 SMAD family member 3 0.113146
KRT8 keratin 8, type II 0.108601
KRT18 keratin 18, type I 0.102894
KRT20 keratin 20, type I 0.101989
MYO1E myosin IE 0.100783
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0985733
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0961601
PTPRK protein tyrosine phosphatase, receptor type, K 0.0855752
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0803694
EXPH5 exophilin 5 0.0743933
KLF5 Kruppel-like factor 5 (intestinal) 0.0743851
ZSWIM6 zinc finger, SWIM-type containing 6 0.0708138
ERRFI1 ERBB receptor feedback inhibitor 1 0.0692853
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0687508
PDLIM5 PDZ and LIM domain 5 0.0634802
PLK2 polo-like kinase 2 0.0624049
LYZ lysozyme 0.0615353
POF1B premature ovarian failure, 1B 0.0610323
AFF1 AF4/FMR2 family, member 1 0.059904
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0582622
ATXN1 ataxin 1 0.0581578
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0562011
NCEH1 neutral cholesterol ester hydrolase 1 0.0555472
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type 0.0533493
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0533475
CTBP2 C-terminal binding protein 2 0.0505754
SGMS2 sphingomyelin synthase 2 0.0489958
PDZD8 PDZ domain containing 8 0.0485497
SIK3 SIK family kinase 3 0.0476052
EEF2 eukaryotic translation elongation factor 2 0.0462427
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.0458839
BCL2L1 BCL2-like 1 0.0458612
FOXP1 forkhead box P1 0.044732
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0443725
FTH1 ferritin, heavy polypeptide 1 0.0428956
FNDC3B fibronectin type III domain containing 3B 0.0426436
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0425802
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0424497
TRAPPC9 trafficking protein particle complex 9 0.0421382
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0420766
FAT1 FAT atypical cadherin 1 0.041776
LOC102724023 ES1 protein homolog, mitochondrial 0.0410888
ETV6 ets variant 6 0.039806
RPS12 ribosomal protein S12 0.0396701
EMP1 epithelial membrane protein 1 0.0392839
UTRN utrophin 0.0392284
INTS6 integrator complex subunit 6 0.0389304
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0385716
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0383743
EPS8 epidermal growth factor receptor pathway substrate 8 0.0380718
PRKN parkin RBR E3 ubiquitin protein ligase 0.0380503
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0372402
MARCHF3 membrane associated ring-CH-type finger 3 0.0363243
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0361259
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0358673
ASTN2 astrotactin 2 0.0358106
CCSER1 coiled-coil serine-rich protein 1 0.0356908
FOXO1 forkhead box O1 0.0355763
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0348744
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.034641
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 0.0346224
ARHGAP42 Rho GTPase activating protein 42 0.0344974
TLE4 transducin-like enhancer of split 4 0.0344225
MYADM myeloid-associated differentiation marker 0.0344119
ARHGAP32 Rho GTPase activating protein 32 0.0341051
MYO5B myosin VB 0.0338729
LOC112694756 uncharaterized LOC112694756 0.0338048
VMP1 vacuole membrane protein 1 0.0338048
FHL2 four and a half LIM domains 2 0.0334697
ITPRID2 ITPR interacting domain containing 2 0.0333522
TRIB1 tribbles pseudokinase 1 0.0330453
EGFR epidermal growth factor receptor 0.0330098
CCNYL1 cyclin Y-like 1 0.0326222
BAIAP2L1 BAI1-associated protein 2-like 1 0.0326128
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0325138
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0324235
PRR5L proline rich 5 like 0.0318063
PDE4D phosphodiesterase 4D, cAMP-specific 0.031635
LIMA1 LIM domain and actin binding 1 0.031489
PELI1 pellino E3 ubiquitin protein ligase 1 0.0314404
RPS16 ribosomal protein S16 0.0311663
NEBL nebulette 0.0311598
PGCKA1 PDCD10 and GCKIII kinases associated 1 0.0310633
TMC5 transmembrane channel-like 5 0.0308748
RPS2 ribosomal protein S2 0.030705
RPS3 ribosomal protein S3 0.030555
ADARB1 adenosine deaminase, RNA-specific, B1 0.0302638
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0302324
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0299867
PPARD peroxisome proliferator-activated receptor delta 0.0299255
GOLGB1 golgin B1 0.0298834
LURAP1L leucine rich adaptor protein 1-like 0.0295905
LAMA4 laminin, alpha 4 0.0294877
HSD17B2 hydroxysteroid (17-beta) dehydrogenase 2 0.0293733
DST dystonin 0.0292857

decreased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 -0.136273
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0798049
PTMA prothymosin, alpha -0.068454
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.065027
NAMPT nicotinamide phosphoribosyltransferase -0.0590463
RAD21 RAD21 homolog (S. pombe) -0.0556626
OGA O-GlcNAcase -0.0552127
TPT1 tumor protein, translationally-controlled 1 -0.0549971
RBM39 RNA binding motif protein 39 -0.053162
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0509348
ZMYM2 zinc finger, MYM-type 2 -0.0505988
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0468605
ZNF292 zinc finger protein 292 -0.0459558
VIM vimentin -0.0442369
KDM3A lysine (K)-specific demethylase 3A -0.0434951
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0430909
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0429965
PLAUR plasminogen activator, urokinase receptor -0.0407008
TRA2A transformer 2 alpha homolog (Drosophila) -0.0399608
TMSB10 thymosin beta 10 -0.0379094
THOC2 THO complex 2 -0.0377561
RTN4 reticulon 4 -0.0374369
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0367612
GOLGA4 golgin A4 -0.0340209
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0336739
GARS1 glycyl-tRNA synthetase 1 -0.0335642
TM9SF3 transmembrane 9 superfamily member 3 -0.0331718
PNISR PNN-interacting serine/arginine-rich protein -0.030837
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0303286
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0298953
PTK2 protein tyrosine kinase 2 -0.0295174
SBF2 SET binding factor 2 -0.0290367
TMEM41B transmembrane protein 41B -0.0288793
TXNRD1 thioredoxin reductase 1 -0.0287583
PGK1 phosphoglycerate kinase 1 -0.0286903
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0285945
ANLN anillin, actin binding protein -0.0284768
ADAM17 ADAM metallopeptidase domain 17 -0.0281819
LCORL ligand dependent nuclear receptor corepressor-like -0.0280787
USP3 ubiquitin specific peptidase 3 -0.0276287
CD46 CD46 molecule, complement regulatory protein -0.0272308
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0271381
FAM13A family with sequence similarity 13, member A -0.0267365
ZFAND3 zinc finger, AN1-type domain 3 -0.0261607
CENPF centromere protein F, 350/400kDa -0.026072
HELZ helicase with zinc finger -0.0260492
MARCHF6 membrane associated ring-CH-type finger 6 -0.0255816
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0252302
RLF rearranged L-myc fusion -0.0248077
WSB1 WD repeat and SOCS box containing 1 -0.0247667
TPD52 tumor protein D52 -0.0235805
ITPKC inositol-trisphosphate 3-kinase C -0.0234631
ZFAND6 zinc finger, AN1-type domain 6 -0.0233384
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0233357
PUM2 pumilio RNA-binding family member 2 -0.0231926
EZR ezrin -0.0231479
H1-0 H1.0 linker histone -0.0230356
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0229355
RB1CC1 RB1-inducible coiled-coil 1 -0.0228029
ZDHHC20 zinc finger, DHHC-type containing 20 -0.0226723
POMP proteasome maturation protein -0.0225517
ACACA acetyl-CoA carboxylase alpha -0.0221907
PTEN phosphatase and tensin homolog -0.0220987
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0220742
CCNL1 cyclin L1 -0.0220296
RAP1B RAP1B, member of RAS oncogene family -0.022007
RNF145 ring finger protein 145 -0.0218046
FOSL1 FOS-like antigen 1 -0.0217494
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.021619
ESRP1 epithelial splicing regulatory protein 1 -0.0215157
SAMD12 sterile alpha motif domain containing 12 -0.0215023
DENND4C DENN/MADD domain containing 4C -0.0213982
GNAS GNAS complex locus -0.0213616
ANKRD12 ankyrin repeat domain 12 -0.0212711
FAM162A family with sequence similarity 162, member A -0.0212031
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha -0.0211252
PDS5B PDS5 cohesin associated factor B -0.020855
SETD5 SET domain containing 5 -0.0207984
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.020696
ZMYND8 zinc finger, MYND-type containing 8 -0.0205304
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.020505
BIRC6 baculoviral IAP repeat containing 6 -0.0203535
NECTIN2 nectin cell adhesion molecule 2 -0.0201889
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0201835
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0201808
ANKRD11 ankyrin repeat domain 11 -0.0201135
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0201
RSBN1L round spermatid basic protein 1-like -0.0200584
WASF2 WAS protein family, member 2 -0.0199963
NIBAN2 niban apoptosis regulator 2 -0.0198859
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0198347
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0196049
CTTNBP2NL CTTNBP2 N-terminal like -0.0195513
MATR3 matrin 3 -0.0194895
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0193817
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0192907
ATP11B ATPase, class VI, type 11B -0.0192722
PTBP2 polypyrimidine tract binding protein 2 -0.0192233
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.019149
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0191305