4EGI-1_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.198807
EXT1 exostosin glycosyltransferase 1 0.142806
HMGA2 high mobility group AT-hook 2 0.12477
PABPC1 poly(A) binding protein, cytoplasmic 1 0.11687
HDAC9 histone deacetylase 9 0.107057
ACTG1 actin gamma 1 0.102859
RPS12 ribosomal protein S12 0.0983249
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0911723
RPS2 ribosomal protein S2 0.0842235
SAMD4A sterile alpha motif domain containing 4A 0.0772101
EFNA5 ephrin-A5 0.073369
DTNA dystrobrevin, alpha 0.0730672
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0715979
LSAMP limbic system-associated membrane protein 0.0705761
HSPA8 heat shock 70kDa protein 8 0.0694524
FTL ferritin, light polypeptide 0.067554
ASPH aspartate beta-hydroxylase 0.0632933
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0615762
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0613644
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.060163
MARCHF4 membrane associated ring-CH-type finger 4 0.0579932
RPS3 ribosomal protein S3 0.0578187
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0572368
PTPRG protein tyrosine phosphatase, receptor type, G 0.0546317
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0509426
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.050841
RPL5 ribosomal protein L5 0.0492742
RACK1 receptor for activated C kinase 1 0.0479254
RPS17 ribosomal protein S17 0.0476059
PBX3 pre-B-cell leukemia homeobox 3 0.0464445
EIF4B eukaryotic translation initiation factor 4B 0.0463184
DOCK4 dedicator of cytokinesis 4 0.045932
ZSWIM6 zinc finger, SWIM-type containing 6 0.0455229
PRKCE protein kinase C, epsilon 0.0453093
ZCCHC7 zinc finger, CCHC domain containing 7 0.0448084
INTS6 integrator complex subunit 6 0.0445052
RPL37A ribosomal protein L37a 0.0406862
USP34 ubiquitin specific peptidase 34 0.040228
ENO1 enolase 1, (alpha) 0.0400082
CXCL8 chemokine (C-X-C motif) ligand 8 0.0392533
LIMS1 LIM and senescent cell antigen-like domains 1 0.0371234
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0365502
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0362434
BPTF bromodomain PHD finger transcription factor 0.0360774
SAMD3 sterile alpha motif domain containing 3 0.0360465
RPS8 ribosomal protein S8 0.0359283
GPHN gephyrin 0.0358375
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0357373
EIF1 eukaryotic translation initiation factor 1 0.0355624
RPL21 ribosomal protein L21 0.0355183
KTN1 kinectin 1 (kinesin receptor) 0.0352027
ZNF638 zinc finger protein 638 0.0347912
RUNX1 runt-related transcription factor 1 0.0345367
TPM3 tropomyosin 3 0.0342783
RPL12 ribosomal protein L12 0.034049
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0339606
RPL7 ribosomal protein L7 0.0338462
NAV3 neuron navigator 3 0.0336853
BRD2 bromodomain containing 2 0.0329769
FLNA filamin A, alpha 0.0327844
SET SET nuclear proto-oncogene 0.0323945
AGO2 argonaute RISC catalytic component 2 0.0319042
ZBTB20 zinc finger and BTB domain containing 20 0.0317227
RPL3 ribosomal protein L3 0.0314401
EEF1G eukaryotic translation elongation factor 1 gamma 0.0312487
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.031128
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0305641
SDCCAG8 serologically defined colon cancer antigen 8 0.0305196
EGR1 early growth response 1 0.0294383
ADAM32 ADAM metallopeptidase domain 32 0.0293861
LIMA1 LIM domain and actin binding 1 0.0293111
DGKI diacylglycerol kinase, iota 0.0285204
SFPQ splicing factor proline/glutamine-rich 0.028473
ARB2A ARB2 cotranscriptional regulator A 0.0283243
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0282952
PRKG1 protein kinase, cGMP-dependent, type I 0.0281722
RPL23 ribosomal protein L23 0.0281472
MSR1 macrophage scavenger receptor 1 0.0278652
RPL31 ribosomal protein L31 0.0272286
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0270555
PLEC plectin 0.026913
MCTP1 multiple C2 domains, transmembrane 1 0.0265351
ARFGEF3 ARFGEF family member 3 0.0264937
BACE2 beta-site APP-cleaving enzyme 2 0.026386
TTC17 tetratricopeptide repeat domain 17 0.0263129
RPS18 ribosomal protein S18 0.0262603
RABGAP1L RAB GTPase activating protein 1-like 0.0258704
AEBP2 AE binding protein 2 0.0255578
NCOR2 nuclear receptor corepressor 2 0.0254857
CTIF CBP80/20-dependent translation initiation factor 0.0254781
NTM neurotrimin 0.025447
PUM3 pumilio RNA binding family member 3 0.0254352
KLHL29 kelch-like family member 29 0.0251191
FER fer (fps/fes related) tyrosine kinase 0.0247469
EGFR epidermal growth factor receptor 0.0247419
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.024554
RPS6 ribosomal protein S6 0.0243553
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0242533
DSCAM Down syndrome cell adhesion molecule 0.0242512
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0240478

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.212186
PTMA prothymosin, alpha -0.162266
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.109021
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.100655
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0999089
GPC6 glypican 6 -0.0993103
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0983114
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0928959
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0902534
KDM3A lysine (K)-specific demethylase 3A -0.0831964
RTN4 reticulon 4 -0.0748425
WSB1 WD repeat and SOCS box containing 1 -0.0744398
ZNF292 zinc finger protein 292 -0.0722956
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0698906
ANXA2 annexin A2 -0.0669925
GNAS GNAS complex locus -0.0667182
VIM vimentin -0.0658005
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0653976
AKAP12 A kinase (PRKA) anchor protein 12 -0.0644924
NAMPT nicotinamide phosphoribosyltransferase -0.0642313
TPT1 tumor protein, translationally-controlled 1 -0.0632394
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0625131
FNDC3B fibronectin type III domain containing 3B -0.0621367
ELL2 elongation factor, RNA polymerase II, 2 -0.0610702
RBM39 RNA binding motif protein 39 -0.0606604
PGK1 phosphoglycerate kinase 1 -0.0604654
RAD21 RAD21 homolog (S. pombe) -0.0591516
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0591142
AHNAK AHNAK nucleoprotein -0.0588983
UGCG UDP-glucose ceramide glucosyltransferase -0.055336
H1-0 H1.0 linker histone -0.0537728
CDH13 cadherin 13 -0.050646
CD109 CD109 molecule -0.0506046
VCL vinculin -0.0503663
QKI QKI, KH domain containing, RNA binding -0.0482142
TMEM263 transmembrane protein 263 -0.0462245
CAVIN1 caveolae associated protein 1 -0.0460615
ADAM9 ADAM metallopeptidase domain 9 -0.0453689
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0452738
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0449047
SPAG9 sperm associated antigen 9 -0.0437454
RLF rearranged L-myc fusion -0.0433903
PTK2 protein tyrosine kinase 2 -0.0431811
RAB1A RAB1A, member RAS oncogene family -0.0427799
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0410763
FAM162A family with sequence similarity 162, member A -0.04092
RBMS1 RNA binding motif, single stranded interacting protein 1 -0.040871
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0404433
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0403676
OGA O-GlcNAcase -0.0402346
ZMYM2 zinc finger, MYM-type 2 -0.0401655
USP3 ubiquitin specific peptidase 3 -0.0399395
IFI16 interferon, gamma-inducible protein 16 -0.0399354
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0395707
SEPTIN7 septin 7 -0.039497
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0394685
NUP58 nucleoporin 58 -0.0391444
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0380977
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0369777
RPL35A ribosomal protein L35a -0.0368126
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0365318
MMP12 matrix metallopeptidase 12 -0.0363673
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0362355
ALCAM activated leukocyte cell adhesion molecule -0.0360875
MARCHF6 membrane associated ring-CH-type finger 6 -0.0355458
RPS24 ribosomal protein S24 -0.0350031
PTCHD4 patched domain containing 4 -0.0349286
TRA2A transformer 2 alpha homolog (Drosophila) -0.034809
PNISR PNN-interacting serine/arginine-rich protein -0.0343733
KPNB1 karyopherin (importin) beta 1 -0.034304
RNF145 ring finger protein 145 -0.0330877
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0330315
HELZ helicase with zinc finger -0.0329703
IER3 immediate early response 3 -0.0325567
NDRG1 N-myc downstream regulated 1 -0.0325416
BRWD3 bromodomain and WD repeat domain containing 3 -0.0323815
ANLN anillin, actin binding protein -0.0323363
TPM4 tropomyosin 4 -0.0317483
HAS2 hyaluronan synthase 2 -0.0316728
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0313366
KLF6 Kruppel-like factor 6 -0.0308859
DIAPH3 diaphanous-related formin 3 -0.0303488
SETD5 SET domain containing 5 -0.0300159
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0288102
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0287216
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0286982
RPL6 ribosomal protein L6 -0.0285735
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0285734
ZNF217 zinc finger protein 217 -0.0285624
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0281358
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0281321
KMT2E lysine (K)-specific methyltransferase 2E -0.0279374
FN1 fibronectin 1 -0.0278182
CD2AP CD2-associated protein -0.027814
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0276726
TFG TRK-fused gene -0.0276714
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0274917
LMAN1 lectin, mannose-binding, 1 -0.0273839
LMNA lamin A/C -0.0273403
TMEM123 transmembrane protein 123 -0.0272791