4EGI-1_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EXT1 exostosin glycosyltransferase 1 0.0802976
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0548124
MT2A metallothionein 2A 0.0535012
KLF5 Kruppel-like factor 5 (intestinal) 0.050127
LMO7 LIM domain 7 0.0488309
MYO1E myosin IE 0.0487233
ONECUT3 one cut homeobox 3 0.0466102
HSPA8 heat shock 70kDa protein 8 0.0407499
PTPRK protein tyrosine phosphatase, receptor type, K 0.0371318
MT1E metallothionein 1E 0.0340337
PARD3B par-3 family cell polarity regulator beta 0.0313638
POF1B premature ovarian failure, 1B 0.0311713
FAT1 FAT atypical cadherin 1 0.0294432
ATXN1 ataxin 1 0.0276339
RPLP1 ribosomal protein, large, P1 0.0267199
RAD51B RAD51 paralog B 0.0264771
ZBTB20 zinc finger and BTB domain containing 20 0.0261022
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0260957
NEBL nebulette 0.0257651
SAMD4A sterile alpha motif domain containing 4A 0.0249777
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0249585
UNC13B unc-13 homolog B (C. elegans) 0.0245561
CCSER1 coiled-coil serine-rich protein 1 0.0245422
CADPS2 Ca++-dependent secretion activator 2 0.0244865
ASPH aspartate beta-hydroxylase 0.0242592
EGFR epidermal growth factor receptor 0.0238502
KRT8 keratin 8, type II 0.0233389
SMYD3 SET and MYND domain containing 3 0.0221141
CADPS Ca++-dependent secretion activator 0.0220536
TRAPPC9 trafficking protein particle complex 9 0.0217658
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0212379
CUX1 cut-like homeobox 1 0.0209187
TAS2R14 taste receptor, type 2, member 14 0.0206601
FAF1 Fas (TNFRSF6) associated factor 1 0.0206191
PATJ PATJ crumbs cell polarity complex component 0.0206087
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 0.0204947
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0202184
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0202055
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0201598
GMDS GDP-mannose 4,6-dehydratase 0.0200234
AFF1 AF4/FMR2 family, member 1 0.020019
AEBP2 AE binding protein 2 0.0199385
PTPRG protein tyrosine phosphatase, receptor type, G 0.0197526
EXOC6B exocyst complex component 6B 0.0197253
XRN1 5'-3' exoribonuclease 1 0.0196317
FBXL17 F-box and leucine-rich repeat protein 17 0.0195157
LURAP1L leucine rich adaptor protein 1-like 0.0193527
ADGRV1 adhesion G protein-coupled receptor V1 0.0193259
PDZD8 PDZ domain containing 8 0.018727
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0185239
GOLGB1 golgin B1 0.0182083
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0182081
MARCHF3 membrane associated ring-CH-type finger 3 0.0181809
PRELID2 PRELI domain containing 2 0.0180937
PNRC1 proline-rich nuclear receptor coactivator 1 0.0180473
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0180056
FOXP1 forkhead box P1 0.0179839
RPL34 ribosomal protein L34 0.0179133
MPRIP myosin phosphatase Rho interacting protein 0.0176176
LPP LIM domain containing preferred translocation partner in lipoma 0.0173106
ANKHD1 ankyrin repeat and KH domain containing 1 0.0172413
OSBPL10 oxysterol binding protein-like 10 0.0164982
TMED2 transmembrane emp24 domain trafficking protein 2 0.0162211
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0161649
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0156314
ZSWIM6 zinc finger, SWIM-type containing 6 0.0156278
BTBD9 BTB (POZ) domain containing 9 0.0156204
N4BP2L2 NEDD4 binding protein 2-like 2 0.0155262
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0155137
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.015446
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0153161
TGFBR3 transforming growth factor, beta receptor III 0.0152183
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0150349
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0149843
PTPRB protein tyrosine phosphatase, receptor type, B 0.0148729
RPS24 ribosomal protein S24 0.0148586
METTL15 methyltransferase like 15 0.0143221
COMMD10 COMM domain containing 10 0.0139506
PDE4D phosphodiesterase 4D, cAMP-specific 0.0139307
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.013776
NKD1 naked cuticle homolog 1 (Drosophila) 0.0137617
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0137133
RIGI RNA sensor RIG-I 0.0136703
CRY1 cryptochrome circadian clock 1 0.0135715
RPL38 ribosomal protein L38 0.0135708
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0134571
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0134438
RPL14 ribosomal protein L14 0.0134168
WNT2B wingless-type MMTV integration site family, member 2B 0.0133723
PGM3 phosphoglucomutase 3 0.0133498
ATF6 activating transcription factor 6 0.0132774
PRDX1 peroxiredoxin 1 0.0131361
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.0131169
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0130384
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0129733
AHI1 Abelson helper integration site 1 0.0129108
TMEM14B transmembrane protein 14B 0.0128956
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0128582
TMCO3 transmembrane and coiled-coil domains 3 0.012807
ANTXR2 anthrax toxin receptor 2 0.0128039

decreased expression

Symbol Name Standardized Value
MUC6 mucin 6, oligomeric mucus/gel-forming -0.164048
NDRG1 N-myc downstream regulated 1 -0.151798
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.122832
PTMA prothymosin, alpha -0.117488
TXNIP thioredoxin interacting protein -0.115771
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.105328
ITGA6 integrin, alpha 6 -0.0924937
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0894491
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0879878
FTH1 ferritin, heavy polypeptide 1 -0.0848764
FAM13A family with sequence similarity 13, member A -0.08355
TNS4 tensin 4 -0.0788459
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0779404
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0772523
ANXA2 annexin A2 -0.0756946
FLNB filamin B, beta -0.0740977
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0738282
EZR ezrin -0.0716675
CD46 CD46 molecule, complement regulatory protein -0.0697454
RNF145 ring finger protein 145 -0.0684405
NPSR1 neuropeptide S receptor 1 -0.068235
GPHN gephyrin -0.0666057
MED13L mediator complex subunit 13-like -0.063503
ESYT2 extended synaptotagmin-like protein 2 -0.0626152
GOLGA4 golgin A4 -0.0609308
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0602981
SETD5 SET domain containing 5 -0.0597618
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0596323
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0596242
PPARG peroxisome proliferator-activated receptor gamma -0.0583061
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0565841
CEMIP cell migration inducing protein, hyaluronan binding -0.0551058
ZNF292 zinc finger protein 292 -0.0527902
MLEC malectin -0.0524155
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0519647
CCNY cyclin Y -0.0519636
PTBP3 polypyrimidine tract binding protein 3 -0.0507635
HMGA1 high mobility group AT-hook 1 -0.0499786
KRT18 keratin 18, type I -0.0484806
KMT2E lysine (K)-specific methyltransferase 2E -0.0476131
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0469021
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0467277
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0464887
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0464295
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0462344
WAC WW domain containing adaptor with coiled-coil -0.0457717
NCOR1 nuclear receptor corepressor 1 -0.0451312
CALB1 calbindin 1, 28kDa -0.0443996
NUP58 nucleoporin 58 -0.0428361
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0421475
PDIA3 protein disulfide isomerase family A, member 3 -0.042027
FNBP1L formin binding protein 1-like -0.0420266
SREBF2 sterol regulatory element binding transcription factor 2 -0.0415512
DDIT4 DNA-damage-inducible transcript 4 -0.0413497
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0409356
INSIG1 insulin induced gene 1 -0.040746
GCC2 GRIP and coiled-coil domain containing 2 -0.0407355
WDR45B WD repeat domain 45B -0.0406882
EPCAM epithelial cell adhesion molecule -0.0399926
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0395884
USP3 ubiquitin specific peptidase 3 -0.0395456
RREB1 ras responsive element binding protein 1 -0.0394018
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0393365
TPM4 tropomyosin 4 -0.0382463
FOSL1 FOS-like antigen 1 -0.0378853
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0376027
LOC102724023 ES1 protein homolog, mitochondrial -0.037308
ITGB4 integrin, beta 4 -0.0370093
RAB6A RAB6A, member RAS oncogene family -0.0369507
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0369189
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 -0.0369068
RBM39 RNA binding motif protein 39 -0.0362843
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0360614
TFG TRK-fused gene -0.0359825
POTEF POTE ankyrin domain family, member F -0.0359376
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.035713
PERP PERP, TP53 apoptosis effector -0.0355516
KRT19 keratin 19, type I -0.0353353
CCNL1 cyclin L1 -0.0351841
AREG amphiregulin -0.0351795
EXOC1 exocyst complex component 1 -0.0351113
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0347073
MUC17 mucin 17, cell surface associated -0.0346027
PICALM phosphatidylinositol binding clathrin assembly protein -0.0342402
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0339758
ABHD2 abhydrolase domain containing 2 -0.0335885
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0328526
GARS1 glycyl-tRNA synthetase 1 -0.0326404
PIGR polymeric immunoglobulin receptor -0.0322931
COPA coatomer protein complex, subunit alpha -0.0320585
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.031944
TRA2A transformer 2 alpha homolog (Drosophila) -0.0318867
PNISR PNN-interacting serine/arginine-rich protein -0.0317271
UBE2H ubiquitin-conjugating enzyme E2H -0.0317044
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) -0.0316894
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0314955
RPS6 ribosomal protein S6 -0.0314378
RAP1B RAP1B, member of RAS oncogene family -0.0313917
LGALS4 lectin, galactoside-binding, soluble, 4 -0.0308603
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0305763