4EGI-1_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.134686
LAMC2 laminin, gamma 2 0.0958447
SAMD4A sterile alpha motif domain containing 4A 0.083521
KYNU kynureninase 0.0820257
EGFR epidermal growth factor receptor 0.0617069
INTS6 integrator complex subunit 6 0.0584991
PHF3 PHD finger protein 3 0.0576224
VCL vinculin 0.0534831
DTNA dystrobrevin, alpha 0.051411
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.048183
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0479182
MACF1 microtubule-actin crosslinking factor 1 0.0473228
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.046412
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0452646
BACE2 beta-site APP-cleaving enzyme 2 0.0450199
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.044484
TM4SF1 transmembrane 4 L six family member 1 0.0436291
MAST4 microtubule associated serine/threonine kinase family member 4 0.0411401
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.041068
IL1RN interleukin 1 receptor antagonist 0.0408956
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0408098
RND3 Rho family GTPase 3 0.0405951
NAV2 neuron navigator 2 0.0405726
NABP1 nucleic acid binding protein 1 0.0405628
FNIP1 folliculin interacting protein 1 0.0404009
EGR1 early growth response 1 0.0403746
MT2A metallothionein 2A 0.038891
ARB2A ARB2 cotranscriptional regulator A 0.0382366
LAMB3 laminin, beta 3 0.0381417
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0381079
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0375665
CDCP1 CUB domain containing protein 1 0.0375585
CATSPERB catsper channel auxiliary subunit beta 0.0373937
AKAP9 A kinase (PRKA) anchor protein 9 0.0371063
TBC1D22A TBC1 domain family, member 22A 0.0370427
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0361547
UBAP2 ubiquitin associated protein 2 0.0351051
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0350983
OCLN occludin 0.0350969
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0348541
ZSWIM6 zinc finger, SWIM-type containing 6 0.034817
CLIP1 CAP-GLY domain containing linker protein 1 0.0347666
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0346791
RICTOR RPTOR independent companion of MTOR, complex 2 0.0345695
SP100 SP100 nuclear antigen 0.0333789
CD59 CD59 molecule, complement regulatory protein 0.0329289
DHX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 0.0327743
SEPTIN10 septin 10 0.0327639
MAPK8 mitogen-activated protein kinase 8 0.0320161
LAMA4 laminin, alpha 4 0.0318524
PICALM phosphatidylinositol binding clathrin assembly protein 0.0318438
SOD2 superoxide dismutase 2, mitochondrial 0.0316846
CREBBP CREB binding protein 0.0316429
GOLGA4 golgin A4 0.0315894
PLAUR plasminogen activator, urokinase receptor 0.0315089
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.031356
CNKSR3 CNKSR family member 3 0.0310568
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0310031
CAMTA1 calmodulin binding transcription activator 1 0.0307091
SMAD3 SMAD family member 3 0.0305843
MACC1 metastasis associated in colon cancer 1 0.0305217
ZMYM2 zinc finger, MYM-type 2 0.0305074
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0302302
RBM47 RNA binding motif protein 47 0.0299893
KRT18 keratin 18, type I 0.0298699
ARHGAP5 Rho GTPase activating protein 5 0.0297926
SETD2 SET domain containing 2 0.029511
NKD1 naked cuticle homolog 1 (Drosophila) 0.0293843
ZFR zinc finger RNA binding protein 0.0293046
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0289833
FRMD5 FERM domain containing 5 0.028574
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0284958
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.0282847
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0281083
CCSER1 coiled-coil serine-rich protein 1 0.0280911
WNK1 WNK lysine deficient protein kinase 1 0.0280709
RSAD2 radical S-adenosyl methionine domain containing 2 0.0279748
SMOC1 SPARC related modular calcium binding 1 0.0279413
TYW1B tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae) 0.027893
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0278253
MORC3 MORC family CW-type zinc finger 3 0.0277206
ULK4 unc-51 like kinase 4 0.0275292
FEM1C fem-1 homolog c (C. elegans) 0.0273415
PPARD peroxisome proliferator-activated receptor delta 0.0270543
GABARAPL2 GABA(A) receptor-associated protein-like 2 0.0262999
ANO6 anoctamin 6 0.0260334
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0259818
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0259396
SPIRE1 spire-type actin nucleation factor 1 0.0258529
AKAP13 A kinase (PRKA) anchor protein 13 0.025683
SH3KBP1 SH3-domain kinase binding protein 1 0.0256572
ETV3 ets variant 3 0.025655
TSC22D1 TSC22 domain family, member 1 0.0256392
BRD2 bromodomain containing 2 0.0256065
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 0.0253084
PPARG peroxisome proliferator-activated receptor gamma 0.0249577
ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 0.0248805
WWOX WW domain containing oxidoreductase 0.0244981
JMJD1C jumonji domain containing 1C 0.0244477
OSBPL8 oxysterol binding protein-like 8 0.0243187

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.127296
FN1 fibronectin 1 -0.125794
GRB10 growth factor receptor-bound protein 10 -0.125527
IGFBP3 insulin-like growth factor binding protein 3 -0.111526
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0947851
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0941391
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0899017
PTMA prothymosin, alpha -0.0817991
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0800812
NDRG1 N-myc downstream regulated 1 -0.0744343
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0652936
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0638503
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0631571
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0587375
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0584747
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0573447
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0568939
NCOA3 nuclear receptor coactivator 3 -0.0559017
RIOK3 RIO kinase 3 -0.0554995
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0538365
BTG1 B-cell translocation gene 1, anti-proliferative -0.0534842
LMO7 LIM domain 7 -0.0534355
ESYT2 extended synaptotagmin-like protein 2 -0.0524236
FAM13A family with sequence similarity 13, member A -0.0508369
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0505467
POTEF POTE ankyrin domain family, member F -0.0474945
PDIA3 protein disulfide isomerase family A, member 3 -0.0468813
KMT2E lysine (K)-specific methyltransferase 2E -0.0467131
RPL23 ribosomal protein L23 -0.0467081
ZMYND8 zinc finger, MYND-type containing 8 -0.0465011
FAM107B family with sequence similarity 107, member B -0.0464754
VIM vimentin -0.0455256
SRPK2 SRSF protein kinase 2 -0.0443961
SREBF2 sterol regulatory element binding transcription factor 2 -0.0431736
PCBP2 poly(rC) binding protein 2 -0.0425088
B2M beta-2-microglobulin -0.0418529
ATOSA atos homolog A -0.0409864
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0407004
BIRC6 baculoviral IAP repeat containing 6 -0.0403062
PDE4D phosphodiesterase 4D, cAMP-specific -0.039769
TMSB10 thymosin beta 10 -0.0389286
FMN1 formin 1 -0.038928
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0385831
PTK2 protein tyrosine kinase 2 -0.038507
CALR calreticulin -0.0383666
HELZ helicase with zinc finger -0.0383472
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0380406
TAOK3 TAO kinase 3 -0.0380358
FDPS farnesyl diphosphate synthase -0.0377236
CD2AP CD2-associated protein -0.0375324
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0374957
GPC6 glypican 6 -0.0374523
PUM2 pumilio RNA-binding family member 2 -0.0374394
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0374137
MYO6 myosin VI -0.0374085
KDM5B lysine (K)-specific demethylase 5B -0.0371422
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0371232
UBE2R2 ubiquitin-conjugating enzyme E2R 2 -0.0367932
ARHGAP35 Rho GTPase activating protein 35 -0.0365844
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0362795
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0361562
TPR translocated promoter region, nuclear basket protein -0.0359219
LMTK2 lemur tyrosine kinase 2 -0.0358109
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0355575
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0355332
LMNA lamin A/C -0.0354659
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0353715
TMEM41B transmembrane protein 41B -0.0352665
PRRC2C proline-rich coiled-coil 2C -0.0349862
WDR26 WD repeat domain 26 -0.0349549
KDM3A lysine (K)-specific demethylase 3A -0.0346305
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0343955
RREB1 ras responsive element binding protein 1 -0.0341961
USP3 ubiquitin specific peptidase 3 -0.0339447
MYOF myoferlin -0.0331676
ATXN2 ataxin 2 -0.0330351
FOXO3 forkhead box O3 -0.0329183
RPL35A ribosomal protein L35a -0.0329069
RCOR1 REST corepressor 1 -0.0328968
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0327177
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0323418
CALD1 caldesmon 1 -0.0318779
TOP1 topoisomerase (DNA) I -0.0317812
BBX bobby sox homolog (Drosophila) -0.0314569
S100A6 S100 calcium binding protein A6 -0.0313247
OSBPL10 oxysterol binding protein-like 10 -0.0310277
TAOK1 TAO kinase 1 -0.030984
WASF2 WAS protein family, member 2 -0.0309284
RPL37A ribosomal protein L37a -0.0309085
ZNF638 zinc finger protein 638 -0.0308866
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0308781
FBXL20 F-box and leucine-rich repeat protein 20 -0.0307216
LIMCH1 LIM and calponin homology domains 1 -0.0304755
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0304538
USP15 ubiquitin specific peptidase 15 -0.030296
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0302641
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 -0.0296241
ZNF207 zinc finger protein 207 -0.0294078
RAB6A RAB6A, member RAS oncogene family -0.029372
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0291447