4EGI-1_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KRT8 keratin 8, type II 0.139583
PABPC1 poly(A) binding protein, cytoplasmic 1 0.136373
EEF2 eukaryotic translation elongation factor 2 0.0859637
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0813572
RPS12 ribosomal protein S12 0.0698825
B2M beta-2-microglobulin 0.0579225
NEBL nebulette 0.053561
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0514541
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0513556
RPS2 ribosomal protein S2 0.0458762
RPS3 ribosomal protein S3 0.0399564
DSPP dentin sialophosphoprotein 0.0390256
HSPA8 heat shock 70kDa protein 8 0.0389597
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0354749
BRD2 bromodomain containing 2 0.0342104
AKAP9 A kinase (PRKA) anchor protein 9 0.0336779
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0321315
PCBP2 poly(rC) binding protein 2 0.0317511
VMP1 vacuole membrane protein 1 0.0306421
DIAPH1 diaphanous-related formin 1 0.0306224
RPL3 ribosomal protein L3 0.0304688
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0299454
FTH1 ferritin, heavy polypeptide 1 0.0286046
PCLO piccolo presynaptic cytomatrix protein 0.0283016
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0275265
PARD3B par-3 family cell polarity regulator beta 0.027266
TPM3 tropomyosin 3 0.0266589
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0258967
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0256466
EIF4B eukaryotic translation initiation factor 4B 0.0252388
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0251752
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0250904
TRIM2 tripartite motif containing 2 0.0247287
CALR calreticulin 0.0246211
PDLIM5 PDZ and LIM domain 5 0.0242129
SFPQ splicing factor proline/glutamine-rich 0.0240572
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0238234
TXNIP thioredoxin interacting protein 0.0237036
BCAS3 breast carcinoma amplified sequence 3 0.0234562
TMED2 transmembrane emp24 domain trafficking protein 2 0.0234141
AKAP13 A kinase (PRKA) anchor protein 13 0.0229231
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0227778
MYO5B myosin VB 0.022697
TBC1D5 TBC1 domain family, member 5 0.0220903
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0220843
SMYD3 SET and MYND domain containing 3 0.0219507
CCNL1 cyclin L1 0.0219003
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0214692
EEF1G eukaryotic translation elongation factor 1 gamma 0.0214579
NRP1 neuropilin 1 0.0209763
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0209467
SET SET nuclear proto-oncogene 0.0209326
RPL21 ribosomal protein L21 0.0205476
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0204503
YAP1 Yes-associated protein 1 0.0203943
SKAP2 src kinase associated phosphoprotein 2 0.0202783
CLDN4 claudin 4 0.0196934
MACC1 metastasis associated in colon cancer 1 0.0191756
MKRN1 makorin ring finger protein 1 0.0191093
RACK1 receptor for activated C kinase 1 0.0188418
KDM6A lysine (K)-specific demethylase 6A 0.0186422
DOCK4 dedicator of cytokinesis 4 0.0186001
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0182017
DST dystonin 0.0179906
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0178574
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0178551
RPS17 ribosomal protein S17 0.0178169
RBM33 RNA binding motif protein 33 0.0174302
NCKAP1 NCK-associated protein 1 0.0171745
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.017157
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0171284
RPL13A ribosomal protein L13a 0.0170978
RPS7 ribosomal protein S7 0.0169961
RPL5 ribosomal protein L5 0.0168641
RB1CC1 RB1-inducible coiled-coil 1 0.0168231
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0167978
FHIT fragile histidine triad 0.0167494
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 0.0167018
RCN1 reticulocalbin 1, EF-hand calcium binding domain 0.01665
NEK7 NIMA-related kinase 7 0.0165673
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0164931
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0163479
SAMD12 sterile alpha motif domain containing 12 0.0163276
WDPCP WD repeat containing planar cell polarity effector 0.0162831
DSCAM Down syndrome cell adhesion molecule 0.0162168
ZNF207 zinc finger protein 207 0.016195
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0161132
EIF5 eukaryotic translation initiation factor 5 0.0160913
ADAM19 ADAM metallopeptidase domain 19 0.0159682
ZNF277 zinc finger protein 277 0.0159636
PNN pinin, desmosome associated protein 0.0159252
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0159243
RICTOR RPTOR independent companion of MTOR, complex 2 0.0158035
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0158012
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0157188
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0157031
ZNRF3 zinc and ring finger 3 0.0155559
RPS18 ribosomal protein S18 0.01553
EXT1 exostosin glycosyltransferase 1 0.015464
EXOC6B exocyst complex component 6B 0.0153928

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.350371
TMSB10 thymosin beta 10 -0.148415
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.144264
MAML2 mastermind-like 2 (Drosophila) -0.102134
AHNAK AHNAK nucleoprotein -0.0931662
GNAS GNAS complex locus -0.0831608
CANX calnexin -0.0822044
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0764021
IER3 immediate early response 3 -0.0758162
TMEM123 transmembrane protein 123 -0.0720035
ZMYND8 zinc finger, MYND-type containing 8 -0.0702744
EPCAM epithelial cell adhesion molecule -0.069328
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0617899
KDM3A lysine (K)-specific demethylase 3A -0.0614321
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0583561
RPL35A ribosomal protein L35a -0.0574571
RPLP1 ribosomal protein, large, P1 -0.0560507
DLG1 discs, large homolog 1 (Drosophila) -0.0551457
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0535365
PGK1 phosphoglycerate kinase 1 -0.0512514
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0508768
NFIA nuclear factor I/A -0.0502117
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0500795
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0482074
H1-0 H1.0 linker histone -0.0477701
CCND1 cyclin D1 -0.0471478
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0468488
S100A6 S100 calcium binding protein A6 -0.0454271
RPS21 ribosomal protein S21 -0.0427157
ZNF217 zinc finger protein 217 -0.0422601
TPT1 tumor protein, translationally-controlled 1 -0.0399115
LOC112694756 uncharaterized LOC112694756 -0.0395894
AKAP12 A kinase (PRKA) anchor protein 12 -0.0395407
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0394355
VCL vinculin -0.0390663
RPS24 ribosomal protein S24 -0.0380832
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0380594
TOP1 topoisomerase (DNA) I -0.0375255
NDRG1 N-myc downstream regulated 1 -0.0371888
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0359852
S100A2 S100 calcium binding protein A2 -0.0355378
CTSD cathepsin D -0.0354783
PPARG peroxisome proliferator-activated receptor gamma -0.035102
IFITM1 interferon induced transmembrane protein 1 -0.034451
SPDYA speedy/RINGO cell cycle regulator family member A -0.0337334
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0334308
KPNB1 karyopherin (importin) beta 1 -0.0332476
HDLBP high density lipoprotein binding protein -0.0329068
HLA-A major histocompatibility complex, class I, A -0.0320466
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0316232
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 -0.0315556
GMDS GDP-mannose 4,6-dehydratase -0.0314848
OSBPL3 oxysterol binding protein-like 3 -0.0312838
HM13 histocompatibility (minor) 13 -0.0312297
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0308825
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0305202
STAU1 staufen double-stranded RNA binding protein 1 -0.0301659
GCC2 GRIP and coiled-coil domain containing 2 -0.0299681
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0299107
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0298686
TPM4 tropomyosin 4 -0.0296588
EPB41L1 erythrocyte membrane protein band 4.1-like 1 -0.0293165
LARS1 leucyl-tRNA synthetase 1 -0.0290298
TRA2A transformer 2 alpha homolog (Drosophila) -0.0289143
PERP PERP, TP53 apoptosis effector -0.0287033
SDC4 syndecan 4 -0.0285792
PKM pyruvate kinase, muscle -0.0284788
RRBP1 ribosome binding protein 1 -0.0280079
TES testin LIM domain protein -0.0279384
SLC38A1 solute carrier family 38, member 1 -0.0277851
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0277715
EHF ets homologous factor -0.0271653
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0271626
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0268546
CD2AP CD2-associated protein -0.026792
ZBTB38 zinc finger and BTB domain containing 38 -0.0265524
IFRD1 interferon-related developmental regulator 1 -0.0264893
FLNB filamin B, beta -0.0257604
RBM39 RNA binding motif protein 39 -0.0256449
LDHA lactate dehydrogenase A -0.0255895
SERINC5 serine incorporator 5 -0.0255023
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0254679
ACTN4 actinin, alpha 4 -0.025294
BBX bobby sox homolog (Drosophila) -0.0252824
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0251217
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0244439
PRELID2 PRELI domain containing 2 -0.0242787
KLK10 kallikrein-related peptidase 10 -0.024266
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0240216
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0239156
FRAS1 Fraser extracellular matrix complex subunit 1 -0.0238743
EGR1 early growth response 1 -0.0235492
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0235257
SETD5 SET domain containing 5 -0.0234806
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0232759
RAD21 RAD21 homolog (S. pombe) -0.0231865
WSB1 WD repeat and SOCS box containing 1 -0.0231329
PDIA5 protein disulfide isomerase family A, member 5 -0.0229737
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0228336
EHBP1 EH domain binding protein 1 -0.0227452