4EGI-1_SW480 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 4EGI-1 perturbation in SW480 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 4EGI-1_SW480 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0914841
AKAP12 A kinase (PRKA) anchor protein 12 0.084062
ASPH aspartate beta-hydroxylase 0.0764176
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0576579
INTS6 integrator complex subunit 6 0.0565968
NTSR1 neurotensin receptor 1 (high affinity) 0.0514207
HSPA8 heat shock 70kDa protein 8 0.0490041
ANO1 anoctamin 1, calcium activated chloride channel 0.0463779
PLEC plectin 0.0446503
BACE2 beta-site APP-cleaving enzyme 2 0.0427934
DST dystonin 0.039429
NAV2 neuron navigator 2 0.0383047
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0362383
LAMA4 laminin, alpha 4 0.0348736
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0343701
SPATA13 spermatogenesis associated 13 0.0341738
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.034036
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.033433
EZR ezrin 0.0333558
EEF2 eukaryotic translation elongation factor 2 0.0325393
KRT18 keratin 18, type I 0.0324754
EGFR epidermal growth factor receptor 0.0315275
VCL vinculin 0.031417
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0312326
SAMD4A sterile alpha motif domain containing 4A 0.030382
FRMD5 FERM domain containing 5 0.0284893
SDK1 sidekick cell adhesion molecule 1 0.0284592
CTSB cathepsin B 0.0280826
KRT8 keratin 8, type II 0.0279993
YAP1 Yes-associated protein 1 0.0266462
ACTN1 actinin, alpha 1 0.025859
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0256962
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0256498
MACF1 microtubule-actin crosslinking factor 1 0.0252136
RCOR1 REST corepressor 1 0.0251614
PDLIM5 PDZ and LIM domain 5 0.0248955
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.02387
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0232319
SORBS1 sorbin and SH3 domain containing 1 0.0221605
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0219962
ZEB1 zinc finger E-box binding homeobox 1 0.0214681
AHNAK2 AHNAK nucleoprotein 2 0.0214262
CLSTN2 calsyntenin 2 0.0214024
ITPRID2 ITPR interacting domain containing 2 0.0212203
CD44 CD44 molecule (Indian blood group) 0.0207846
EMP1 epithelial membrane protein 1 0.0205548
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0204677
ZSWIM6 zinc finger, SWIM-type containing 6 0.0201458
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0200011
MYO1E myosin IE 0.0197441
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0196203
BCAR3 breast cancer anti-estrogen resistance 3 0.0195966
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0195942
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0195079
ZFP36L1 ZFP36 ring finger protein-like 1 0.019484
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.019479
DOCK9 dedicator of cytokinesis 9 0.0193566
HPCAL1 hippocalcin-like 1 0.0193394
CDHR3 cadherin-related family member 3 0.019082
ITGB4 integrin, beta 4 0.0188574
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0186241
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0180375
NPAS2 neuronal PAS domain protein 2 0.0179841
LRMDA leucine rich melanocyte differentiation associated 0.0177522
CLIP2 CAP-GLY domain containing linker protein 2 0.01765
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0176473
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0175913
MSN moesin 0.017131
LMO7 LIM domain 7 0.0171241
SQSTM1 sequestosome 1 0.0171191
SFPQ splicing factor proline/glutamine-rich 0.0168451
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0166361
VMP1 vacuole membrane protein 1 0.0166187
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0165467
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0165392
SMAD3 SMAD family member 3 0.0164071
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.0163627
ARHGAP32 Rho GTPase activating protein 32 0.0163575
UBAP2 ubiquitin associated protein 2 0.0163486
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0162782
ADAM19 ADAM metallopeptidase domain 19 0.0162663
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 0.0162215
CAPN2 calpain 2, (m/II) large subunit 0.0161389
DOCK5 dedicator of cytokinesis 5 0.0160917
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 0.0153885
AFAP1L2 actin filament associated protein 1-like 2 0.0153444
FHIT fragile histidine triad 0.015322
ATXN7L1 ataxin 7-like 1 0.0153151
EPHA4 EPH receptor A4 0.0152355
HOMER1 homer scaffolding protein 1 0.0149669
ABR active BCR-related 0.0149173
EXOC4 exocyst complex component 4 0.0149066
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0148665
AKAP13 A kinase (PRKA) anchor protein 13 0.0148197
RBP1 retinol binding protein 1, cellular 0.0147698
RPS12 ribosomal protein S12 0.0147167
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0146918
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0145342
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0144643
FAT1 FAT atypical cadherin 1 0.0143339

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.240364
TMSB10 thymosin beta 10 -0.153861
PTMA prothymosin, alpha -0.149825
RPL35A ribosomal protein L35a -0.113978
RPS6 ribosomal protein S6 -0.105951
RPLP1 ribosomal protein, large, P1 -0.0952257
PGK1 phosphoglycerate kinase 1 -0.0646003
RPS19 ribosomal protein S19 -0.0582292
RPLP2 ribosomal protein, large, P2 -0.0545167
RPL11 ribosomal protein L11 -0.05424
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0540328
RPL19 ribosomal protein L19 -0.0528148
RPL23 ribosomal protein L23 -0.0524362
RPS24 ribosomal protein S24 -0.0523418
RPS21 ribosomal protein S21 -0.0516254
DIAPH3 diaphanous-related formin 3 -0.0508928
RPL32 ribosomal protein L32 -0.0492209
MKI67 marker of proliferation Ki-67 -0.0484305
KPNB1 karyopherin (importin) beta 1 -0.0484247
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0480742
RPS13 ribosomal protein S13 -0.0479182
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0477409
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0467731
SMC4 structural maintenance of chromosomes 4 -0.0461628
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0443799
NKD1 naked cuticle homolog 1 (Drosophila) -0.0440853
RPLP0 ribosomal protein, large, P0 -0.0436168
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0430335
THOC2 THO complex 2 -0.0426215
OXR1 oxidation resistance 1 -0.0422501
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0422093
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0421514
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0420831
ANLN anillin, actin binding protein -0.0404653
EIF1 eukaryotic translation initiation factor 1 -0.0390392
FTL ferritin, light polypeptide -0.038879
MT2A metallothionein 2A -0.0387753
RPL27A ribosomal protein L27a -0.0380542
CENPF centromere protein F, 350/400kDa -0.03758
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0375422
ZMYND8 zinc finger, MYND-type containing 8 -0.0374714
RUNX1 runt-related transcription factor 1 -0.0371193
SOX4 SRY (sex determining region Y)-box 4 -0.0370978
GNAS GNAS complex locus -0.0362365
RBM39 RNA binding motif protein 39 -0.0361186
DLG1 discs, large homolog 1 (Drosophila) -0.0359987
GARS1 glycyl-tRNA synthetase 1 -0.0352009
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0351897
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0350644
CD46 CD46 molecule, complement regulatory protein -0.0349135
RPS27A ribosomal protein S27a -0.0347523
HMGB1 high mobility group box 1 -0.0341737
MYL12B myosin, light chain 12B, regulatory -0.0341666
RPS23 ribosomal protein S23 -0.0340717
HMGB2 high mobility group box 2 -0.0340666
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0339819
RPL26 ribosomal protein L26 -0.0339564
PFN1 profilin 1 -0.0335431
PRRC2C proline-rich coiled-coil 2C -0.0334988
RPL34 ribosomal protein L34 -0.0331883
RPL12 ribosomal protein L12 -0.0326677
NAP1L1 nucleosome assembly protein 1-like 1 -0.0320629
RPL8 ribosomal protein L8 -0.0317389
TPI1 triosephosphate isomerase 1 -0.031547
H3-3B H3.3 histone B -0.0305574
RBM25 RNA binding motif protein 25 -0.0305141
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0305082
RPS3 ribosomal protein S3 -0.030496
RPS4X ribosomal protein S4, X-linked -0.0304709
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0302585
CBX3 chromobox homolog 3 -0.0302462
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.030155
RPL36A ribosomal protein L36a -0.0300298
DEK DEK proto-oncogene -0.0295086
TRA2A transformer 2 alpha homolog (Drosophila) -0.0293975
RPL5 ribosomal protein L5 -0.0292925
RPS11 ribosomal protein S11 -0.0290086
TUBA1B tubulin, alpha 1b -0.0289652
TXNIP thioredoxin interacting protein -0.0288619
RPL18 ribosomal protein L18 -0.028706
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0286324
BRWD3 bromodomain and WD repeat domain containing 3 -0.028562
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0285467
ATP5F1B ATP synthase F1 subunit beta -0.0282307
MORF4L2 mortality factor 4 like 2 -0.0280519
RPL35 ribosomal protein L35 -0.0277126
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0275423
KDM3A lysine (K)-specific demethylase 3A -0.0274977
RPL9 ribosomal protein L9 -0.027489
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0272597
RAD21 RAD21 homolog (S. pombe) -0.0270508
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0269073
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0268968
RPL7 ribosomal protein L7 -0.0268616
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0268463
FYN FYN proto-oncogene, Src family tyrosine kinase -0.0267975
RPS5 ribosomal protein S5 -0.0266835
RPL37 ribosomal protein L37 -0.0266215
WDFY2 WD repeat and FYVE domain containing 2 -0.0264603
RPS16 ribosomal protein S16 -0.0262332