5-Azacytidine_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 5-Azacytidine perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 5-Azacytidine_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.144406
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.134854
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.121088
FBN1 fibrillin 1 0.101961
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0689682
SOD2 superoxide dismutase 2, mitochondrial 0.0663797
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0641202
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0616747
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0579236
ATP13A3 ATPase type 13A3 0.0530281
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0495844
FNDC3B fibronectin type III domain containing 3B 0.0492845
BHLHE40 basic helix-loop-helix family, member e40 0.0465399
FTH1 ferritin, heavy polypeptide 1 0.0414199
SEPTIN9 septin 9 0.0405211
GOLGA4 golgin A4 0.0384689
SRRM2 serine/arginine repetitive matrix 2 0.0380503
GLS2 glutaminase 2 (liver, mitochondrial) 0.0379946
TNIP1 TNFAIP3 interacting protein 1 0.036836
COL3A1 collagen, type III, alpha 1 0.0365461
CALR calreticulin 0.0364437
APP amyloid beta (A4) precursor protein 0.0361342
MYH9 myosin, heavy chain 9, non-muscle 0.0355749
DST dystonin 0.0354015
WDFY1 WD repeat and FYVE domain containing 1 0.0350747
OPTN optineurin 0.0346883
CD109 CD109 molecule 0.034365
LOX lysyl oxidase 0.0326152
MBNL2 muscleblind-like splicing regulator 2 0.0323422
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0320645
NFE2L1 nuclear factor, erythroid 2-like 1 0.0318443
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0316907
CYLD cylindromatosis (turban tumor syndrome) 0.0314935
IQGAP1 IQ motif containing GTPase activating protein 1 0.0314811
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0309346
INSIG2 insulin induced gene 2 0.0309095
SBF2 SET binding factor 2 0.0304709
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0293648
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0292199
COL1A2 collagen, type I, alpha 2 0.0286987
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0286599
COL5A2 collagen, type V, alpha 2 0.0285745
PKM pyruvate kinase, muscle 0.0282581
DPYSL3 dihydropyrimidinase-like 3 0.0282248
RNF145 ring finger protein 145 0.0281333
GPC6 glypican 6 0.027918
OGA O-GlcNAcase 0.0278959
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0278764
MXI1 MAX interactor 1, dimerization protein 0.0273897
COPA coatomer protein complex, subunit alpha 0.0271893
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0271525
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0270761
TPM3 tropomyosin 3 0.0268404
AFF4 AF4/FMR2 family, member 4 0.0261089
FMNL2 formin-like 2 0.0254523
NFIX nuclear factor I/X (CCAAT-binding transcription factor) 0.0250209
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0249209
HELZ helicase with zinc finger 0.0246955
KMT2E lysine (K)-specific methyltransferase 2E 0.0246644
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0246374
SPAG9 sperm associated antigen 9 0.0245397
MMP12 matrix metallopeptidase 12 0.0244547
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0244296
ESYT2 extended synaptotagmin-like protein 2 0.0243745
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0242883
SOX9 SRY (sex determining region Y)-box 9 0.024139
TTC3 tetratricopeptide repeat domain 3 0.0240896
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.024012
COL8A1 collagen, type VIII, alpha 1 0.0239838
ATP11B ATPase, class VI, type 11B 0.0239267
FRMD5 FERM domain containing 5 0.0238332
ITSN2 intersectin 2 0.0236829
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0234717
PICALM phosphatidylinositol binding clathrin assembly protein 0.023468
ADAM17 ADAM metallopeptidase domain 17 0.0234084
ADM adrenomedullin 0.0232934
ARL15 ADP-ribosylation factor-like 15 0.0231628
FNIP1 folliculin interacting protein 1 0.0231254
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0229473
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0226738
NGLY1 N-glycanase 1 0.0226526
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0225138
PSD3 pleckstrin and Sec7 domain containing 3 0.022021
ZEB2 zinc finger E-box binding homeobox 2 0.0219924
RNMT RNA (guanine-7-) methyltransferase 0.0218679
YEATS2 YEATS domain containing 2 0.0216757
MSN moesin 0.0216663
SSBP2 single-stranded DNA binding protein 2 0.0213893
COL6A2 collagen, type VI, alpha 2 0.0213855
ZEB1 zinc finger E-box binding homeobox 1 0.0211532
DENND5A DENN/MADD domain containing 5A 0.0209622
DCAF6 DDB1 and CUL4 associated factor 6 0.0209345
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 0.0208785
ARRDC3 arrestin domain containing 3 0.0207612
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0206837
LOXL2 lysyl oxidase-like 2 0.0206733
FNBP4 formin binding protein 4 0.0206476
HIP1 huntingtin interacting protein 1 0.0205353
UBC ubiquitin C 0.0202195
RAB8B RAB8B, member RAS oncogene family 0.0201941

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.216857
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.20526
VIM vimentin -0.162175
CDH13 cadherin 13 -0.132874
AHNAK AHNAK nucleoprotein -0.130571
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.123498
MT2A metallothionein 2A -0.120008
S100A10 S100 calcium binding protein A10 -0.11879
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.112321
IGFBP3 insulin-like growth factor binding protein 3 -0.108872
NAV1 neuron navigator 1 -0.0871487
COL5A1 collagen, type V, alpha 1 -0.0870751
HLA-B major histocompatibility complex, class I, B -0.0823795
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.081472
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0791372
PLAT plasminogen activator, tissue -0.0763926
MAP1B microtubule-associated protein 1B -0.0704295
FN1 fibronectin 1 -0.064158
SAMD9 sterile alpha motif domain containing 9 -0.0611263
LMNA lamin A/C -0.0586548
ABI3BP ABI family, member 3 (NESH) binding protein -0.054278
EFNA5 ephrin-A5 -0.0541957
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0541263
CSTB cystatin B (stefin B) -0.0503833
NDRG1 N-myc downstream regulated 1 -0.0503006
S100A6 S100 calcium binding protein A6 -0.0501072
TPT1 tumor protein, translationally-controlled 1 -0.0498291
HLA-C major histocompatibility complex, class I, C -0.0490832
SLC39A11 solute carrier family 39, member 11 -0.048331
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0481556
RIGI RNA sensor RIG-I -0.0472892
CAVIN1 caveolae associated protein 1 -0.0454502
MX2 MX dynamin-like GTPase 2 -0.0444102
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0441675
ANKRD11 ankyrin repeat domain 11 -0.0440675
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.044059
ASPH aspartate beta-hydroxylase -0.0419691
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0406723
TUBB4B tubulin, beta 4B class IVb -0.0406302
PRSS23 protease, serine, 23 -0.0396918
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0395194
SUCNR1 succinate receptor 1 -0.0394949
CCND1 cyclin D1 -0.039379
IFITM3 interferon induced transmembrane protein 3 -0.0393251
ISG15 ISG15 ubiquitin-like modifier -0.0386888
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0373932
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0372037
SP100 SP100 nuclear antigen -0.0363054
PLXNA2 plexin A2 -0.0362781
MACF1 microtubule-actin crosslinking factor 1 -0.0360306
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0359082
PBX3 pre-B-cell leukemia homeobox 3 -0.0358636
S100A4 S100 calcium binding protein A4 -0.0346915
SLC38A1 solute carrier family 38, member 1 -0.0342827
PODXL podocalyxin-like -0.0340893
CUX1 cut-like homeobox 1 -0.0338482
LOC112694756 uncharaterized LOC112694756 -0.0336643
DGKG diacylglycerol kinase, gamma 90kDa -0.0332226
IFI6 interferon, alpha-inducible protein 6 -0.033026
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0327702
RRBP1 ribosome binding protein 1 -0.0326306
LRRC17 leucine rich repeat containing 17 -0.0325525
PTMA prothymosin, alpha -0.0321808
AKAP12 A kinase (PRKA) anchor protein 12 -0.0317382
SEPTIN7 septin 7 -0.0310584
RPLP1 ribosomal protein, large, P1 -0.0305408
RPS24 ribosomal protein S24 -0.0304274
IFI16 interferon, gamma-inducible protein 16 -0.0301005
IFIH1 interferon induced with helicase C domain 1 -0.0297356
FLT1 fms-related tyrosine kinase 1 -0.0295993
CD99 CD99 molecule -0.029451
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0288214
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0287114
RPL28 ribosomal protein L28 -0.0287025
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0286642
SORBS2 sorbin and SH3 domain containing 2 -0.0281809
RPL23 ribosomal protein L23 -0.0281589
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0279898
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0279388
RPL35A ribosomal protein L35a -0.0278534
RPS15 ribosomal protein S15 -0.0277026
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0273011
SEC61G Sec61 gamma subunit -0.027288
EGFR epidermal growth factor receptor -0.0271467
ZMYND8 zinc finger, MYND-type containing 8 -0.0271357
CYTH3 cytohesin 3 -0.0268553
ACTG1 actin gamma 1 -0.0268505
DCLK2 doublecortin-like kinase 2 -0.026794
CDK6 cyclin-dependent kinase 6 -0.0261232
IL7R interleukin 7 receptor -0.0257991
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0256686
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0256532
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0255783
RPS19 ribosomal protein S19 -0.0254845
HSPB1 heat shock 27kDa protein 1 -0.0253032
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0251536
AHNAK2 AHNAK nucleoprotein 2 -0.024956
ANXA2 annexin A2 -0.0247506
RPS8 ribosomal protein S8 -0.0241714
PGK1 phosphoglycerate kinase 1 -0.0241032