5-Azacytidine_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 5-Azacytidine perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 5-Azacytidine_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.111229
ANXA1 annexin A1 0.107917
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.101199
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0995156
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0673039
STARD4 StAR-related lipid transfer (START) domain containing 4 0.06287
EEF2 eukaryotic translation elongation factor 2 0.056555
ZBTB20 zinc finger and BTB domain containing 20 0.0497678
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0492083
KIF5B kinesin family member 5B 0.047538
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0461617
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0448283
ECT2 epithelial cell transforming 2 0.0435495
TPM3 tropomyosin 3 0.0420991
ERRFI1 ERBB receptor feedback inhibitor 1 0.0385101
CEP192 centrosomal protein 192kDa 0.0369595
PLK2 polo-like kinase 2 0.0364374
SRRM2 serine/arginine repetitive matrix 2 0.0358824
RPL41 ribosomal protein L41 0.0350505
CLDND1 claudin domain containing 1 0.0350043
CCNL1 cyclin L1 0.0349532
TPR translocated promoter region, nuclear basket protein 0.0334619
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0333139
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0331369
EIF4A2 eukaryotic translation initiation factor 4A2 0.0323233
ADAM17 ADAM metallopeptidase domain 17 0.0322023
ERBB4 erb-b2 receptor tyrosine kinase 4 0.031695
TMEM41B transmembrane protein 41B 0.0314958
CENPE centromere protein E, 312kDa 0.0304024
NCEH1 neutral cholesterol ester hydrolase 1 0.030376
GASK1B golgi associated kinase 1B 0.0293314
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0287005
ZNF146 zinc finger protein 146 0.027947
DSPP dentin sialophosphoprotein 0.0272764
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.027207
EIF4B eukaryotic translation initiation factor 4B 0.0270424
PCBP2 poly(rC) binding protein 2 0.0269866
CEP70 centrosomal protein 70kDa 0.0267751
CKAP5 cytoskeleton associated protein 5 0.0266989
ENO1 enolase 1, (alpha) 0.0264889
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0262977
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0262614
WNK1 WNK lysine deficient protein kinase 1 0.0262556
GSK3B glycogen synthase kinase 3 beta 0.0260439
MKI67 marker of proliferation Ki-67 0.0259733
RPL4 ribosomal protein L4 0.0255465
HDAC9 histone deacetylase 9 0.0255346
USP9X ubiquitin specific peptidase 9, X-linked 0.0254081
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0248874
NUP58 nucleoporin 58 0.024804
MARCHF4 membrane associated ring-CH-type finger 4 0.0240878
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0240563
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0239789
GPR15 G protein-coupled receptor 15 0.0237216
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0235759
EZR ezrin 0.0233119
YTHDC1 YTH domain containing 1 0.0227876
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0226222
RB1CC1 RB1-inducible coiled-coil 1 0.0224074
LEMD3 LEM domain containing 3 0.0223855
LMO7 LIM domain 7 0.0223581
NDC80 NDC80 kinetochore complex component 0.0222715
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0219482
AHR aryl hydrocarbon receptor 0.0217737
CLDN1 claudin 1 0.0217264
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0214916
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0212927
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0207893
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0207189
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0206053
AFF4 AF4/FMR2 family, member 4 0.0205268
EDN1 endothelin 1 0.0200742
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0197528
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0197322
AFDN afadin, adherens junction formation factor 0.019698
CPNE1 copine I 0.0195886
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0195169
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0192745
KIF1B kinesin family member 1B 0.0192705
CENPF centromere protein F, 350/400kDa 0.0190952
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0190591
CPSF6 cleavage and polyadenylation specific factor 6, 68kDa 0.019045
GIGYF2 GRB10 interacting GYF protein 2 0.0190159
IPMK inositol polyphosphate multikinase 0.018818
ZBTB11 zinc finger and BTB domain containing 11 0.0187029
CLTC clathrin, heavy chain (Hc) 0.0185911
CBX5 chromobox homolog 5 0.0183546
SSR1 signal sequence receptor, alpha 0.0182951
FXR1 fragile X mental retardation, autosomal homolog 1 0.0182667
RAB6A RAB6A, member RAS oncogene family 0.0178696
MYPN myopalladin 0.0178464
TARDBP TAR DNA binding protein 0.0177988
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0175821
YEATS2 YEATS domain containing 2 0.0174848
CASC3 cancer susceptibility candidate 3 0.0174094
PANK3 pantothenate kinase 3 0.0173102
SEC31A SEC31 homolog A (S. cerevisiae) 0.0172566
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.0172458
ITSN2 intersectin 2 0.0170909
OXR1 oxidation resistance 1 0.0170542

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.298581
TMSB10 thymosin beta 10 -0.146182
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.114216
PTMA prothymosin, alpha -0.0922828
VIM vimentin -0.0897472
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0831606
NLGN1 neuroligin 1 -0.0826953
FTL ferritin, light polypeptide -0.0816372
HMGA1 high mobility group AT-hook 1 -0.0674644
HMGA2 high mobility group AT-hook 2 -0.0668981
RPL23 ribosomal protein L23 -0.0668129
RPL35A ribosomal protein L35a -0.0657329
ACTG1 actin gamma 1 -0.0649975
TPT1 tumor protein, translationally-controlled 1 -0.0638657
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0595426
RPS6 ribosomal protein S6 -0.0589136
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0570486
RPLP1 ribosomal protein, large, P1 -0.0566474
RPS27A ribosomal protein S27a -0.0549825
AHNAK AHNAK nucleoprotein -0.0506127
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0499702
RPS19 ribosomal protein S19 -0.0460745
YAP1 Yes-associated protein 1 -0.0450181
PDE4D phosphodiesterase 4D, cAMP-specific -0.0442376
RPL19 ribosomal protein L19 -0.0432629
HSPB1 heat shock 27kDa protein 1 -0.0403894
RPL38 ribosomal protein L38 -0.0402187
RPS8 ribosomal protein S8 -0.0401479
RPS24 ribosomal protein S24 -0.0391028
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0381982
IFIH1 interferon induced with helicase C domain 1 -0.0379002
CCND1 cyclin D1 -0.0376154
RAB7A RAB7A, member RAS oncogene family -0.0366476
HMGB1 high mobility group box 1 -0.0353077
RPL34 ribosomal protein L34 -0.0349961
ZNF804A zinc finger protein 804A -0.034785
RPL12 ribosomal protein L12 -0.0347441
RPL36 ribosomal protein L36 -0.0346124
S100A10 S100 calcium binding protein A10 -0.0346008
RPL9 ribosomal protein L9 -0.0339114
EGR1 early growth response 1 -0.0335736
CNRIP1 cannabinoid receptor interacting protein 1 -0.0330831
LPP LIM domain containing preferred translocation partner in lipoma -0.0323598
MYL12B myosin, light chain 12B, regulatory -0.0323542
RPS21 ribosomal protein S21 -0.0321274
CUX1 cut-like homeobox 1 -0.0313331
ATP5F1B ATP synthase F1 subunit beta -0.0308294
ANKRD12 ankyrin repeat domain 12 -0.0307336
MAP1B microtubule-associated protein 1B -0.0299731
PFN1 profilin 1 -0.0298029
GNAS GNAS complex locus -0.0294419
TRIO trio Rho guanine nucleotide exchange factor -0.0290989
PARD3 par-3 family cell polarity regulator -0.0286731
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0285133
FAF1 Fas (TNFRSF6) associated factor 1 -0.0283826
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.028131
RPLP2 ribosomal protein, large, P2 -0.0274937
RPL37A ribosomal protein L37a -0.027279
RPS15 ribosomal protein S15 -0.027192
RIMS2 regulating synaptic membrane exocytosis 2 -0.0268183
TMEM123 transmembrane protein 123 -0.0267928
H1-0 H1.0 linker histone -0.0265707
NAP1L1 nucleosome assembly protein 1-like 1 -0.0264848
RPS5 ribosomal protein S5 -0.0264124
TENM3 teneurin transmembrane protein 3 -0.0264096
EIF1 eukaryotic translation initiation factor 1 -0.0261607
RBM39 RNA binding motif protein 39 -0.0255804
NHSL1 NHS-like 1 -0.0255745
RPL31 ribosomal protein L31 -0.0254672
PDIA3 protein disulfide isomerase family A, member 3 -0.0253309
AKAP12 A kinase (PRKA) anchor protein 12 -0.0252855
RPS23 ribosomal protein S23 -0.025037
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.02463
YBX1 Y box binding protein 1 -0.0244469
BCHE butyrylcholinesterase -0.0242035
RPL11 ribosomal protein L11 -0.0239208
CANX calnexin -0.0237655
FNDC3B fibronectin type III domain containing 3B -0.0237568
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0235645
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.023555
RPL26 ribosomal protein L26 -0.0234926
KPNB1 karyopherin (importin) beta 1 -0.0232656
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0232349
ANXA2 annexin A2 -0.0229361
S100A11 S100 calcium binding protein A11 -0.0228004
EXOC4 exocyst complex component 4 -0.0225918
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0222142
RPS27 ribosomal protein S27 -0.0217643
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0217429
SETD5 SET domain containing 5 -0.0217104
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0216604
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0215541
RPS29 ribosomal protein S29 -0.0214386
TUBA1B tubulin, alpha 1b -0.0214149
L3MBTL4 l(3)mbt-like 4 (Drosophila) -0.0213176
PCDH9 protocadherin 9 -0.0213107
RPLP0 ribosomal protein, large, P0 -0.0212499
UBE2B ubiquitin-conjugating enzyme E2B -0.021079
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0208931
RPS16 ribosomal protein S16 -0.0208532