5-Fluorouracil_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 5-Fluorouracil perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 5-Fluorouracil_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.26031
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.126248
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.097299
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0941937
FNDC3B fibronectin type III domain containing 3B 0.0910336
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0907396
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0866567
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0857117
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0809015
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0772998
DSPP dentin sialophosphoprotein 0.0677558
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0619518
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0594377
APLP2 amyloid beta (A4) precursor-like protein 2 0.0565746
SAMD4A sterile alpha motif domain containing 4A 0.0558425
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0554234
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0539001
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0527519
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0509894
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0501912
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0446245
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0436443
RPS3 ribosomal protein S3 0.043609
ENO1 enolase 1, (alpha) 0.0429305
DSCAM Down syndrome cell adhesion molecule 0.0409072
PDGFB platelet-derived growth factor beta polypeptide 0.0396994
PLIN2 perilipin 2 0.0381244
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0379927
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0370087
LDHA lactate dehydrogenase A 0.036991
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0361385
RTN4 reticulon 4 0.0358521
RPL3 ribosomal protein L3 0.0346188
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0341576
ASPH aspartate beta-hydroxylase 0.0338379
CPE carboxypeptidase E 0.0336914
RPL4 ribosomal protein L4 0.0328682
MAML2 mastermind-like 2 (Drosophila) 0.0326208
NOL4L nucleolar protein 4-like 0.0323568
DDIT4 DNA-damage-inducible transcript 4 0.0318635
MBNL2 muscleblind-like splicing regulator 2 0.0318059
JMJD1C jumonji domain containing 1C 0.0309104
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0308233
VMP1 vacuole membrane protein 1 0.0303914
FLNB filamin B, beta 0.0302599
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 0.0298538
KDM3A lysine (K)-specific demethylase 3A 0.0296622
ARFGEF3 ARFGEF family member 3 0.0287862
SOS1 son of sevenless homolog 1 (Drosophila) 0.0286334
CCL20 chemokine (C-C motif) ligand 20 0.0285908
VEGFA vascular endothelial growth factor A 0.0284329
CEMIP2 cell migration inducing hyaluronidase 2 0.0283976
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.028183
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0281756
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 0.0278334
SCAF11 SR-related CTD-associated factor 11 0.0277934
WAPL WAPL cohesin release factor 0.0271539
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0271403
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0268029
PCGF5 polycomb group ring finger 5 0.026733
NCOR1 nuclear receptor corepressor 1 0.0266369
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 0.0266301
NDRG1 N-myc downstream regulated 1 0.0261957
AFDN afadin, adherens junction formation factor 0.0255619
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0254411
WWC2 WW and C2 domain containing 2 0.0252542
N4BP2L2 NEDD4 binding protein 2-like 2 0.02479
EIF4A2 eukaryotic translation initiation factor 4A2 0.0247757
PDIA6 protein disulfide isomerase family A, member 6 0.0242769
MICU1 mitochondrial calcium uptake 1 0.0240875
YTHDC1 YTH domain containing 1 0.023933
ZNF292 zinc finger protein 292 0.0236486
FNIP1 folliculin interacting protein 1 0.0233989
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0233153
MBD5 methyl-CpG binding domain protein 5 0.0232949
SPOPL speckle-type POZ protein-like 0.0232399
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0232396
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0231214
PDE8A phosphodiesterase 8A 0.0230678
CTNND1 catenin (cadherin-associated protein), delta 1 0.0227287
NCKAP1 NCK-associated protein 1 0.0222827
MAPK6 mitogen-activated protein kinase 6 0.0222593
CD109 CD109 molecule 0.0222474
USP47 ubiquitin specific peptidase 47 0.0221075
FOXN3 forkhead box N3 0.0220014
WDFY2 WD repeat and FYVE domain containing 2 0.0218839
EFNA1 ephrin-A1 0.0217178
PDIA4 protein disulfide isomerase family A, member 4 0.0214865
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.021389
EEF2 eukaryotic translation elongation factor 2 0.021299
FAM219A family with sequence similarity 219, member A 0.0212807
CFB complement factor B 0.0212454
LAMP2 lysosomal-associated membrane protein 2 0.0212207
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.0210712
SLC35F5 solute carrier family 35, member F5 0.021011
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.021009
ZNF395 zinc finger protein 395 0.0209946
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0209346
PRELID2 PRELI domain containing 2 0.0209234
RPLP0 ribosomal protein, large, P0 0.0207028

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.33599
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.126634
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0994962
FN1 fibronectin 1 -0.0986183
MT2A metallothionein 2A -0.0923316
APOB apolipoprotein B -0.0909074
PTCHD4 patched domain containing 4 -0.080819
IGFBP1 insulin-like growth factor binding protein 1 -0.0753612
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0727712
RPL35A ribosomal protein L35a -0.0629789
GPC6 glypican 6 -0.0604537
RPS24 ribosomal protein S24 -0.0601053
NKD1 naked cuticle homolog 1 (Drosophila) -0.0587565
APOA2 apolipoprotein A-II -0.056877
RPL34 ribosomal protein L34 -0.0522007
RPL23 ribosomal protein L23 -0.0512696
APOA1 apolipoprotein A-I -0.0504863
ENAH enabled homolog (Drosophila) -0.0498135
FRMD5 FERM domain containing 5 -0.0476908
FTL ferritin, light polypeptide -0.0459166
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0456591
GPC3 glypican 3 -0.0425523
TMSB10 thymosin beta 10 -0.0424078
KLHL5 kelch-like family member 5 -0.0423399
TMEM123 transmembrane protein 123 -0.0413883
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0396451
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0395985
TCF12 transcription factor 12 -0.0392784
LMCD1 LIM and cysteine-rich domains 1 -0.0392639
GNAS GNAS complex locus -0.038221
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0376384
TPT1 tumor protein, translationally-controlled 1 -0.0375808
AMBP alpha-1-microglobulin/bikunin precursor -0.0373782
A2M alpha-2-macroglobulin -0.0372787
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0371041
DOCK4 dedicator of cytokinesis 4 -0.0365894
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0365227
BCL2L1 BCL2-like 1 -0.0356563
EPS8 epidermal growth factor receptor pathway substrate 8 -0.035209
RPS19 ribosomal protein S19 -0.0351632
FAM107B family with sequence similarity 107, member B -0.0348696
RBM39 RNA binding motif protein 39 -0.0332175
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0330377
RPS20 ribosomal protein S20 -0.0327885
RPL31 ribosomal protein L31 -0.0325891
LCOR ligand dependent nuclear receptor corepressor -0.0322955
RRBP1 ribosome binding protein 1 -0.0309646
TGFBI transforming growth factor, beta-induced, 68kDa -0.0309324
FNDC3A fibronectin type III domain containing 3A -0.0303906
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0299914
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0296673
GMDS GDP-mannose 4,6-dehydratase -0.0292019
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0289884
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0285714
RNF213 ring finger protein 213 -0.0284799
ZBTB20 zinc finger and BTB domain containing 20 -0.0281586
LPP LIM domain containing preferred translocation partner in lipoma -0.0281304
RBM33 RNA binding motif protein 33 -0.0280109
HSPG2 heparan sulfate proteoglycan 2 -0.0278268
FUS FUS RNA binding protein -0.0277838
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0276213
RPS6 ribosomal protein S6 -0.0272544
CAPZB capping protein (actin filament) muscle Z-line, beta -0.0270342
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0269991
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0268981
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0267908
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0265751
OLA1 Obg-like ATPase 1 -0.0264977
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.02648
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0256615
RPL11 ribosomal protein L11 -0.0256233
NHSL1 NHS-like 1 -0.0255832
CCND1 cyclin D1 -0.0255532
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0253778
AFF1 AF4/FMR2 family, member 1 -0.0252793
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0252342
TPM4 tropomyosin 4 -0.0246433
RASA2 RAS p21 protein activator 2 -0.0245082
LAMA4 laminin, alpha 4 -0.0243841
ANKRD11 ankyrin repeat domain 11 -0.0243214
GPHN gephyrin -0.0241908
AHR aryl hydrocarbon receptor -0.0241516
ITGAV integrin, alpha V -0.0241464
OSBPL3 oxysterol binding protein-like 3 -0.0241338
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0241333
ZFAND3 zinc finger, AN1-type domain 3 -0.0239806
RSF1 remodeling and spacing factor 1 -0.0237624
IER3 immediate early response 3 -0.0235088
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 -0.0232377
UBE2E3 ubiquitin-conjugating enzyme E2E 3 -0.0228936
FTH1 ferritin, heavy polypeptide 1 -0.02286
RPL9 ribosomal protein L9 -0.0227423
WTAP Wilms tumor 1 associated protein -0.0223626
CP ceruloplasmin (ferroxidase) -0.0220266
RPL28 ribosomal protein L28 -0.0218364
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0218092
AOPEP aminopeptidase O (putative) -0.02179
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0216941
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0216772
BIRC6 baculoviral IAP repeat containing 6 -0.0216527