5-Fluorouracil_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 5-Fluorouracil perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 5-Fluorouracil_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.136274
AKAP12 A kinase (PRKA) anchor protein 12 0.103583
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0859772
FNIP1 folliculin interacting protein 1 0.0838482
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0783384
JMJD1C jumonji domain containing 1C 0.0769699
NAV2 neuron navigator 2 0.0657428
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0588651
FRMPD4 FERM and PDZ domain containing 4 0.0587053
NAMPT nicotinamide phosphoribosyltransferase 0.0580675
ZMYND8 zinc finger, MYND-type containing 8 0.0572361
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0547641
ZCCHC7 zinc finger, CCHC domain containing 7 0.053651
DLG1 discs, large homolog 1 (Drosophila) 0.0523869
NDRG1 N-myc downstream regulated 1 0.0520902
ATXN1 ataxin 1 0.0511052
PDE10A phosphodiesterase 10A 0.0509675
GOLGA4 golgin A4 0.0500111
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0498386
KDM2A lysine (K)-specific demethylase 2A 0.0488065
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0482938
TRIO trio Rho guanine nucleotide exchange factor 0.0461912
ADM adrenomedullin 0.0457965
PRELID2 PRELI domain containing 2 0.0457083
DST dystonin 0.0447896
YEATS2 YEATS domain containing 2 0.044102
STC1 stanniocalcin 1 0.043541
AFF3 AF4/FMR2 family, member 3 0.0431981
AKAP9 A kinase (PRKA) anchor protein 9 0.0417371
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0417367
PHF21A PHD finger protein 21A 0.0416772
TNS3 tensin 3 0.041328
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0411352
HDAC9 histone deacetylase 9 0.040677
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0404887
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0397763
CDK19 cyclin-dependent kinase 19 0.0378244
RAI14 retinoic acid induced 14 0.0372351
RB1CC1 RB1-inducible coiled-coil 1 0.0370827
PLIN2 perilipin 2 0.0368218
MMP12 matrix metallopeptidase 12 0.0365435
DOCK5 dedicator of cytokinesis 5 0.0361878
FMNL2 formin-like 2 0.0358355
ARFGEF3 ARFGEF family member 3 0.0356281
PHF3 PHD finger protein 3 0.0350556
PPARD peroxisome proliferator-activated receptor delta 0.0343975
ESYT2 extended synaptotagmin-like protein 2 0.0341577
RND3 Rho family GTPase 3 0.0340759
ANKRD12 ankyrin repeat domain 12 0.0337067
BACE2 beta-site APP-cleaving enzyme 2 0.033482
LRRC7 leucine rich repeat containing 7 0.0334183
CD44 CD44 molecule (Indian blood group) 0.0333284
COPB1 coatomer protein complex, subunit beta 1 0.0329657
EGFR epidermal growth factor receptor 0.0326902
COL8A1 collagen, type VIII, alpha 1 0.0326692
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0326606
PCBP3 poly(rC) binding protein 3 0.0325542
DSCAM Down syndrome cell adhesion molecule 0.0324065
SDK1 sidekick cell adhesion molecule 1 0.0323947
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0323052
FLNB filamin B, beta 0.0322963
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0321387
TMEM14B transmembrane protein 14B 0.0313958
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0304392
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0302455
CD109 CD109 molecule 0.0300697
ZFP36L1 ZFP36 ring finger protein-like 1 0.0293785
RAD51B RAD51 paralog B 0.0291851
ANKHD1 ankyrin repeat and KH domain containing 1 0.0290898
ERRFI1 ERBB receptor feedback inhibitor 1 0.0288556
EXOC4 exocyst complex component 4 0.0285986
USP47 ubiquitin specific peptidase 47 0.0285778
NGLY1 N-glycanase 1 0.0283859
MYO9A myosin IXA 0.028253
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0281525
FNDC3B fibronectin type III domain containing 3B 0.0279801
CERT1 ceramide transporter 1 0.027558
TMEM132D transmembrane protein 132D 0.0275268
MBNL2 muscleblind-like splicing regulator 2 0.0274936
VEGFA vascular endothelial growth factor A 0.0274819
CCBE1 collagen and calcium binding EGF domains 1 0.0274174
ENO2 enolase 2 (gamma, neuronal) 0.0271613
FAM114A1 family with sequence similarity 114, member A1 0.0271521
COPA coatomer protein complex, subunit alpha 0.0270992
CREBRF CREB3 regulatory factor 0.0268174
KDM4C lysine (K)-specific demethylase 4C 0.0268083
CSNK1A1 casein kinase 1, alpha 1 0.0266405
SBF2 SET binding factor 2 0.0265809
TTC3 tetratricopeptide repeat domain 3 0.0263101
SEPTIN9 septin 9 0.0262224
ZNF638 zinc finger protein 638 0.0257754
TIMP2 TIMP metallopeptidase inhibitor 2 0.0256249
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0255013
ENO1 enolase 1, (alpha) 0.025374
SLC39A11 solute carrier family 39, member 11 0.0252347
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0251834
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 0.0251516
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0251385
PTEN phosphatase and tensin homolog 0.0249981
AKAP13 A kinase (PRKA) anchor protein 13 0.0249066

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.139365
FN1 fibronectin 1 -0.117181
BICC1 BicC family RNA binding protein 1 -0.104225
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0961596
FTH1 ferritin, heavy polypeptide 1 -0.0842672
VCL vinculin -0.0767127
TMSB10 thymosin beta 10 -0.0760692
GLIS3 GLIS family zinc finger 3 -0.0701009
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0684679
RPS6 ribosomal protein S6 -0.0643129
RPL23 ribosomal protein L23 -0.0629625
HLA-B major histocompatibility complex, class I, B -0.0598651
LOC112694756 uncharaterized LOC112694756 -0.0597968
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0583106
THBS1 thrombospondin 1 -0.055932
FTL ferritin, light polypeptide -0.0545607
VIM vimentin -0.0544241
EXT1 exostosin glycosyltransferase 1 -0.053689
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0511732
RPS4X ribosomal protein S4, X-linked -0.0490829
RPL19 ribosomal protein L19 -0.0474422
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0458022
WTAP Wilms tumor 1 associated protein -0.0452324
ANXA2 annexin A2 -0.0423055
RPLP1 ribosomal protein, large, P1 -0.0421994
IER3 immediate early response 3 -0.0398976
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0393663
QKI QKI, KH domain containing, RNA binding -0.0383566
FLNA filamin A, alpha -0.0383299
RPS24 ribosomal protein S24 -0.0379732
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0369081
RPS12 ribosomal protein S12 -0.0365715
SMAD3 SMAD family member 3 -0.0357147
B2M beta-2-microglobulin -0.0353699
RACK1 receptor for activated C kinase 1 -0.0351823
RIGI RNA sensor RIG-I -0.0351302
RPS8 ribosomal protein S8 -0.0342878
ICAM1 intercellular adhesion molecule 1 -0.03423
YBX1 Y box binding protein 1 -0.0335849
RPS19 ribosomal protein S19 -0.0335034
RPL5 ribosomal protein L5 -0.0332648
RPL36 ribosomal protein L36 -0.0331389
SOD2 superoxide dismutase 2, mitochondrial -0.0331368
PALLD palladin, cytoskeletal associated protein -0.0331368
HLA-C major histocompatibility complex, class I, C -0.0328104
EEF1G eukaryotic translation elongation factor 1 gamma -0.0322857
COL6A3 collagen, type VI, alpha 3 -0.032166
RPL36A ribosomal protein L36a -0.0320628
RPLP0 ribosomal protein, large, P0 -0.0311646
RPS2 ribosomal protein S2 -0.0311632
FRMD4A FERM domain containing 4A -0.0308722
THBS2 thrombospondin 2 -0.0306208
ACTG1 actin gamma 1 -0.0301797
NABP1 nucleic acid binding protein 1 -0.0300872
RPL32 ribosomal protein L32 -0.0298874
KYNU kynureninase -0.0281843
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0280231
CRY1 cryptochrome circadian clock 1 -0.0279952
TUBB tubulin, beta class I -0.0278153
CDK17 cyclin-dependent kinase 17 -0.0276492
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0276103
ZFAND3 zinc finger, AN1-type domain 3 -0.0273104
NAP1L1 nucleosome assembly protein 1-like 1 -0.0267042
RPL12 ribosomal protein L12 -0.0264204
GNAS GNAS complex locus -0.0264045
TNNC1 troponin C type 1 (slow) -0.0260594
TPM1 tropomyosin 1 (alpha) -0.0259276
NCOA7 nuclear receptor coactivator 7 -0.0256605
GLIPR1 GLI pathogenesis-related 1 -0.0256069
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0254184
TGFBI transforming growth factor, beta-induced, 68kDa -0.0253635
S100A9 S100 calcium binding protein A9 -0.0253231
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0248633
RPL26 ribosomal protein L26 -0.0246842
ACTN1 actinin, alpha 1 -0.0240532
RTN4 reticulon 4 -0.0237178
RPL38 ribosomal protein L38 -0.0235637
GOPC golgi-associated PDZ and coiled-coil motif containing -0.0235133
POTEF POTE ankyrin domain family, member F -0.023431
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0232097
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.023191
RPL35 ribosomal protein L35 -0.0231301
ENAH enabled homolog (Drosophila) -0.0231127
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0228685
RNF213 ring finger protein 213 -0.0227119
TXNRD1 thioredoxin reductase 1 -0.0221137
IFI6 interferon, alpha-inducible protein 6 -0.0217193
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0217014
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0216352
IFITM3 interferon induced transmembrane protein 3 -0.0211953
TRIM22 tripartite motif containing 22 -0.0211041
CORO1C coronin, actin binding protein, 1C -0.0210793
MT2A metallothionein 2A -0.0209988
RPLP2 ribosomal protein, large, P2 -0.0209982
MKI67 marker of proliferation Ki-67 -0.0208755
DCBLD1 discoidin, CUB and LCCL domain containing 1 -0.0208678
SH3RF2 SH3 domain containing ring finger 2 -0.0204744
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0204613
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.020011
SRGN serglycin -0.0199506