5-Fluorouracil_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 5-Fluorouracil perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 5-Fluorouracil_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.138537
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0773509
COPA coatomer protein complex, subunit alpha 0.0716939
GOLGA4 golgin A4 0.0665308
TXNIP thioredoxin interacting protein 0.0550736
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0549085
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.052909
SUCO SUN domain containing ossification factor 0.0524815
NAMPT nicotinamide phosphoribosyltransferase 0.0483091
AKAP9 A kinase (PRKA) anchor protein 9 0.0466269
AHR aryl hydrocarbon receptor 0.0458862
SEC23A Sec23 homolog A (S. cerevisiae) 0.0444618
ACBD3 acyl-CoA binding domain containing 3 0.0436
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0428333
OGA O-GlcNAcase 0.0421975
COG5 component of oligomeric golgi complex 5 0.0409613
LIFR leukemia inhibitory factor receptor alpha 0.0407121
TTC3 tetratricopeptide repeat domain 3 0.0399754
ERRFI1 ERBB receptor feedback inhibitor 1 0.0395469
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0387109
TENT2 terminal nucleotidyltransferase 2 0.0386661
TPR translocated promoter region, nuclear basket protein 0.0382478
COG6 component of oligomeric golgi complex 6 0.0378779
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0377709
DOCK5 dedicator of cytokinesis 5 0.0372458
RO60 Ro60, Y RNA binding protein 0.0363202
APLP2 amyloid beta (A4) precursor-like protein 2 0.0355132
ARHGAP5 Rho GTPase activating protein 5 0.0352354
WAC WW domain containing adaptor with coiled-coil 0.035195
AFF1 AF4/FMR2 family, member 1 0.0350959
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.035091
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0350828
PRRC2C proline-rich coiled-coil 2C 0.0349587
ANKRD28 ankyrin repeat domain 28 0.0349444
SMOX spermine oxidase 0.0348736
SEC24A SEC24 family member A 0.0341865
PNISR PNN-interacting serine/arginine-rich protein 0.0337793
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0336103
ZFC3H1 zinc finger, C3H1-type containing 0.0332568
NIPBL Nipped-B homolog (Drosophila) 0.0331414
SOS1 son of sevenless homolog 1 (Drosophila) 0.0330228
MCTP2 multiple C2 domains, transmembrane 2 0.0320581
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0320502
ZC3H11A zinc finger CCCH-type containing 11A 0.031999
KDM2A lysine (K)-specific demethylase 2A 0.0316509
WDR26 WD repeat domain 26 0.0311662
LCORL ligand dependent nuclear receptor corepressor-like 0.0310901
PELI1 pellino E3 ubiquitin protein ligase 1 0.0304778
RAB18 RAB18, member RAS oncogene family 0.0304703
DUSP5 dual specificity phosphatase 5 0.0304444
CTBP2 C-terminal binding protein 2 0.0301812
THOC2 THO complex 2 0.0301595
DENND5B DENN/MADD domain containing 5B 0.0299004
CSNK1A1 casein kinase 1, alpha 1 0.0296972
GOLT1B golgi transport 1B 0.0296544
UBE2H ubiquitin-conjugating enzyme E2H 0.0287714
ARID4B AT rich interactive domain 4B (RBP1-like) 0.028729
YTHDC1 YTH domain containing 1 0.0286439
EREG epiregulin 0.0285027
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0283331
PICALM phosphatidylinositol binding clathrin assembly protein 0.0280844
CDC27 cell division cycle 27 0.0280444
KDM3A lysine (K)-specific demethylase 3A 0.0279934
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0278552
RICTOR RPTOR independent companion of MTOR, complex 2 0.0278287
WDR45B WD repeat domain 45B 0.027817
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0276244
OSMR oncostatin M receptor 0.0274548
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0272365
ESYT2 extended synaptotagmin-like protein 2 0.0270777
MAP3K9 mitogen-activated protein kinase kinase kinase 9 0.0265841
ETNK1 ethanolamine kinase 1 0.0264296
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0263111
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0262797
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0257301
KMT2E lysine (K)-specific methyltransferase 2E 0.0257
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0255495
ZNF638 zinc finger protein 638 0.0254936
SFXN1 sideroflexin 1 0.0254288
NRIP1 nuclear receptor interacting protein 1 0.0254053
CHD1 chromodomain helicase DNA binding protein 1 0.0251058
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0250683
SEC31A SEC31 homolog A (S. cerevisiae) 0.0250256
ITCH itchy E3 ubiquitin protein ligase 0.0248864
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0248309
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0247399
CREBRF CREB3 regulatory factor 0.0246466
SBNO1 strawberry notch homolog 1 (Drosophila) 0.024392
TMF1 TATA element modulatory factor 1 0.0242002
USP53 ubiquitin specific peptidase 53 0.0241829
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0239769
EPN2 epsin 2 0.0239093
RBM25 RNA binding motif protein 25 0.023597
MATR3 matrin 3 0.0235723
MAP2K4 mitogen-activated protein kinase kinase 4 0.0235206
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0235077
KDM5B lysine (K)-specific demethylase 5B 0.023349
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0233427
CD109 CD109 molecule 0.0232139
MBNL1 muscleblind-like splicing regulator 1 0.0231248

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.179425
NRG1 neuregulin 1 -0.174497
TMSB10 thymosin beta 10 -0.13164
CXCL8 chemokine (C-X-C motif) ligand 8 -0.121396
PTMA prothymosin, alpha -0.121103
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.113115
IFI27 interferon, alpha-inducible protein 27 -0.109808
HMGA2 high mobility group AT-hook 2 -0.104178
MT2A metallothionein 2A -0.0947307
HLA-B major histocompatibility complex, class I, B -0.0811557
VIM vimentin -0.0779353
FTH1 ferritin, heavy polypeptide 1 -0.0710393
RPL35A ribosomal protein L35a -0.0696772
ASPH aspartate beta-hydroxylase -0.0657901
S100A6 S100 calcium binding protein A6 -0.0624539
MAP1B microtubule-associated protein 1B -0.0599453
HMGA1 high mobility group AT-hook 1 -0.0588759
POTEF POTE ankyrin domain family, member F -0.0569158
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0527608
S100A10 S100 calcium binding protein A10 -0.0525932
FTL ferritin, light polypeptide -0.051053
ACTG1 actin gamma 1 -0.0507903
KLHL5 kelch-like family member 5 -0.0502577
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0498954
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0492882
RPL26 ribosomal protein L26 -0.0492055
RPS6 ribosomal protein S6 -0.048625
RPL23 ribosomal protein L23 -0.0476188
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0467326
SOX4 SRY (sex determining region Y)-box 4 -0.0463392
LMNA lamin A/C -0.0451821
GRB10 growth factor receptor-bound protein 10 -0.0445444
B2M beta-2-microglobulin -0.044358
RPL9 ribosomal protein L9 -0.0431913
SQSTM1 sequestosome 1 -0.0427125
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0419972
IER3 immediate early response 3 -0.0418887
TPT1 tumor protein, translationally-controlled 1 -0.0415411
RPS24 ribosomal protein S24 -0.0411832
RPL12 ribosomal protein L12 -0.040823
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0402158
PTK2 protein tyrosine kinase 2 -0.0396716
LOC102724023 ES1 protein homolog, mitochondrial -0.0395447
TFPI2 tissue factor pathway inhibitor 2 -0.0395286
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0377789
IFI6 interferon, alpha-inducible protein 6 -0.0377316
STC2 stanniocalcin 2 -0.0374763
TRIO trio Rho guanine nucleotide exchange factor -0.037309
RPS19 ribosomal protein S19 -0.0372555
TPI1 triosephosphate isomerase 1 -0.0369289
ANKRD11 ankyrin repeat domain 11 -0.0367616
RPL37 ribosomal protein L37 -0.0366827
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0361476
RPL31 ribosomal protein L31 -0.03591
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0351704
IFI16 interferon, gamma-inducible protein 16 -0.0350577
RNF213 ring finger protein 213 -0.0346385
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.033881
RPL38 ribosomal protein L38 -0.033834
NTN4 netrin 4 -0.0328072
EGR1 early growth response 1 -0.0322187
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0313232
LRMDA leucine rich melanocyte differentiation associated -0.0309822
SOX5 SRY (sex determining region Y)-box 5 -0.0309058
NRP1 neuropilin 1 -0.030745
RPS8 ribosomal protein S8 -0.0306163
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0305017
CAPN2 calpain 2, (m/II) large subunit -0.0295534
TPM4 tropomyosin 4 -0.0293534
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0291845
RPL37A ribosomal protein L37a -0.0291206
SYT1 synaptotagmin I -0.0290085
RPS21 ribosomal protein S21 -0.0283756
RPS27 ribosomal protein S27 -0.0283342
RPL34 ribosomal protein L34 -0.0282757
LY6E lymphocyte antigen 6 complex, locus E -0.0279
MKI67 marker of proliferation Ki-67 -0.0277045
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0272595
TMSB4X thymosin beta 4, X-linked -0.0270415
IFI44L interferon-induced protein 44-like -0.0266803
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0262495
RPLP2 ribosomal protein, large, P2 -0.0257882
SLC35F3 solute carrier family 35, member F3 -0.0257467
MRPS6 mitochondrial ribosomal protein S6 -0.0257317
RPS25 ribosomal protein S25 -0.0251402
MX2 MX dynamin-like GTPase 2 -0.025116
HLA-A major histocompatibility complex, class I, A -0.0250239
LIMCH1 LIM and calponin homology domains 1 -0.0248417
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) -0.024529
HMGB1 high mobility group box 1 -0.0242597
TENM4 teneurin transmembrane protein 4 -0.0242128
OXR1 oxidation resistance 1 -0.0239626
WSB1 WD repeat and SOCS box containing 1 -0.0239625
RPS23 ribosomal protein S23 -0.0236043
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0232818
RPS20 ribosomal protein S20 -0.0229974
TMEM156 transmembrane protein 156 -0.0229968
GPATCH2L G patch domain containing 2-like -0.0229812
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0226039
IFITM1 interferon induced transmembrane protein 1 -0.0222706