5637 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Similar Terms
Downloads & Tools

Genes

65 genes with high or low copy number in 5637 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
SRGAP3 SLIT-ROBO Rho GTPase activating protein 3 2.93899
THUMPD3 THUMP domain containing 3 2.93899
LHFPL4 lipoma HMGIC fusion partner-like 4 2.93899
SRGAP3-AS3 SRGAP3 antisense RNA 3 2.93899
SETD5 SET domain containing 5 2.93899
TMEM40 transmembrane protein 40 2.76305
MIR885 microRNA 885 2.76305
IL17RC interleukin 17 receptor C 2.76305
IL17RE interleukin 17 receptor E 2.76305
GHRL ghrelin/obestatin prepropeptide 2.76305
OGG1 8-oxoguanine DNA glycosylase 2.76305
BRK1 BRICK1, SCAR/WAVE actin-nucleating complex subunit 2.76305
FANCD2 Fanconi anemia, complementation group D2 2.76305
SEC13 SEC13 homolog (S. cerevisiae) 2.76305
FBLN2 fibulin 2 2.76305
IRAK2 interleukin-1 receptor-associated kinase 2 2.76305
SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1 2.76305
SLC6A1-AS1 SLC6A1 antisense RNA 1 2.76305
MTMR14 myotubularin related protein 14 2.76305
ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 2.76305
TATDN2 TatD DNase domain containing 2 2.76305
PRRT3 proline-rich transmembrane protein 3 2.76305
JAGN1 jagunal homolog 1 (Drosophila) 2.76305
LINC00852 long intergenic non-protein coding RNA 852 2.76305
CPNE9 copine family member IX 2.76305
HRH1 histamine receptor H1 2.76305
CAMK1 calcium/calmodulin-dependent protein kinase I 2.76305
RPL32 ribosomal protein L32 2.76305
RPUSD3 RNA pseudouridylate synthase domain containing 3 2.76305
TTLL3 tubulin tyrosine ligase-like family member 3 2.76305
FANCD2OS FANCD2 opposite strand 2.76305
SLC6A11 solute carrier family 6 (neurotransmitter transporter), member 11 2.76305
CRELD1 cysteine-rich with EGF-like domains 1 2.76305
LINC00620 long intergenic non-protein coding RNA 620 2.76305
NUP210 nucleoporin 210kDa 2.76305
PRRT3-AS1 PRRT3 antisense RNA 1 2.76305
ARPC4 actin related protein 2/3 complex, subunit 4, 20kDa 2.76305
CIDECP cell death-inducing DFFA-like effector c pseudogene 2.76305
CIDEC cell death-inducing DFFA-like effector c 2.76305
TADA3 transcriptional adaptor 3 2.76305
GHRLOS ghrelin opposite strand/antisense RNA 2.76305
ARPC4-TTLL3 ARPC4-TTLL3 readthrough 2.76305
BRPF1 bromodomain and PHD finger containing, 1 2.76305
CAND2 cullin-associated and neddylation-dissociated 2 (putative) 2.76305
LOC401052 uncharacterized LOC401052 2.76305
FGD5P1 FYVE, RhoGEF and PH domain containing 5 pseudogene 1 2.76305
WNT7A wingless-type MMTV integration site family, member 7A 2.76305
EMC3 ER membrane protein complex subunit 3 2.76305
TPRXL tetra-peptide repeat homeobox-like 2.76305
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase 2.76305
HDAC11 histone deacetylase 11 2.76305
MKRN2 makorin ring finger protein 2 2.64759
TSEN2 TSEN2 tRNA splicing endonuclease subunit 2.64759
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 2.64759
HDGFL1 hepatoma derived growth factor-like 1 2.59653
SOX4 SRY (sex determining region Y)-box 4 2.59653
PPARG peroxisome proliferator-activated receptor gamma 2.59653
PRL prolactin 2.59653
E2F3 E2F transcription factor 3 2.49065
LINC00606 long intergenic non-protein coding RNA 606 2.12225
ATG7 autophagy related 7 2.12225
IQSEC1 IQ motif and Sec7 domain 1 2.12225
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 2.09161

low copy number

Symbol Name Standardized Value
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 -2.84635
CES1P1 carboxylesterase 1 pseudogene 1 -2.74485