60min_BMP4 vs ctrl_hESC (Human) [19664995] Gene Set

Dataset SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands
Category proteomics
Type ligand (protein) perturbation
Description ligand (protein) perturbation identified as [ligand perturbation]_[cell line] ([organism]) [[publication PMID]] (SILAC Phosphoproteomics)
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Genes

275 proteins differentially phosphorylated following the 60min_BMP4 vs ctrl_hESC (Human) [19664995] ligand (protein) perturbation from the SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Protein Ligands dataset.

increased phosphorylation

Symbol Name
AAK1 AP2 associated kinase 1
ABLIM1 actin binding LIM protein 1
ADD1 adducin 1 (alpha)
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
AHNAK AHNAK nucleoprotein
AKAP12 A kinase (PRKA) anchor protein 12
AKIRIN2 akirin 2
AKT1S1 AKT1 substrate 1 (proline-rich)
ALKBH5 AlkB family member 5, RNA demethylase
AMBRA1 autophagy/beclin-1 regulator 1
ANKIB1 ankyrin repeat and IBR domain containing 1
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A
ANKZF1 ankyrin repeat and zinc finger domain containing 1
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5
ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
ATN1 atrophin 1
BABAM1 BRISC and BRCA1 A complex member 1
BAG3 BCL2-associated athanogene 3
BAG4 BCL2-associated athanogene 4
BAIAP2 BAI1-associated protein 2
BAIAP2L1 BAI1-associated protein 2-like 1
BCL9 B-cell CLL/lymphoma 9
BCL9L B-cell CLL/lymphoma 9-like
BRAP BRCA1 associated protein
C12ORF45 chromosome 12 open reading frame 45
C9ORF78 chromosome 9 open reading frame 78
CAAP1 caspase activity and apoptosis inhibitor 1
CALD1 caldesmon 1
CCDC180 coiled-coil domain containing 180
CCDC8 coiled-coil domain containing 8
CDK2 cyclin-dependent kinase 2
CDR2 cerebellar degeneration-related protein 2, 62kDa
CHTF18 CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
CLIP2 CAP-GLY domain containing linker protein 2
CSNK1D casein kinase 1, delta
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa
CTTN cortactin
DCLK1 doublecortin-like kinase 1
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta
DPPA4 developmental pluripotency associated 4
DUSP19 dual specificity phosphatase 19
DUT deoxyuridine triphosphatase
DYRK1B dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
EIF2A eukaryotic translation initiation factor 2A, 65kDa
EIF4B eukaryotic translation initiation factor 4B
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3
ENAH enabled homolog (Drosophila)
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
ERCC5 excision repair cross-complementation group 5
FAM117B family with sequence similarity 117, member B
FAM193A family with sequence similarity 193, member A
FAM21A family with sequence similarity 21, member A
FAM21C family with sequence similarity 21, member C
FAM83D family with sequence similarity 83, member D
FASN fatty acid synthase
FER1L6 fer-1-like family member 6
FGD6 FYVE, RhoGEF and PH domain containing 6
FIP1L1 factor interacting with PAPOLA and CPSF1
FLII flightless I homolog (Drosophila)
FNBP1 formin binding protein 1
FSD1L fibronectin type III and SPRY domain containing 1-like
G3BP1 GTPase activating protein (SH3 domain) binding protein 1
GAL galanin/GMAP prepropeptide
GAL3ST2 galactose-3-O-sulfotransferase 2
GATAD2B GATA zinc finger domain containing 2B
GLCCI1 glucocorticoid induced 1
GSK3B glycogen synthase kinase 3 beta
HEXIM2 hexamethylene bis-acetamide inducible 2
HNRNPM heterogeneous nuclear ribonucleoprotein M
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
JARID2 jumonji, AT rich interactive domain 2
JUN jun proto-oncogene
KIF11 kinesin family member 11
KIF22 kinesin family member 22
KLC1 kinesin light chain 1
KLC2 kinesin light chain 2
KLC4 kinesin light chain 4
LARP7 La ribonucleoprotein domain family, member 7
LIG1 ligase I, DNA, ATP-dependent
LMNA lamin A/C
LSR lipolysis stimulated lipoprotein receptor
LTBP3 latent transforming growth factor beta binding protein 3
MACF1 microtubule-actin crosslinking factor 1
MAP1S microtubule-associated protein 1S
MAP4 microtubule-associated protein 4
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4
MARCKS myristoylated alanine-rich protein kinase C substrate
MCC mutated in colorectal cancers
MED24 mediator complex subunit 24
MICALL1 MICAL-like 1
MID1 midline 1
MKL1 megakaryoblastic leukemia (translocation) 1
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
MYL9 myosin, light chain 9, regulatory
NAB2 NGFI-A binding protein 2 (EGR1 binding protein 2)
NCOA2 nuclear receptor coactivator 2
NEDD1 neural precursor cell expressed, developmentally down-regulated 1
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
NES nestin
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2
ORC6 origin recognition complex, subunit 6
OSBPL10 oxysterol binding protein-like 10
OTUD4 OTU deubiquitinase 4
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
PALM2 paralemmin 2
PANK2 pantothenate kinase 2
PAWR PRKC, apoptosis, WT1, regulator
PCM1 pericentriolar material 1
PCNP PEST proteolytic signal containing nuclear protein
PDLIM1 PDZ and LIM domain 1
PDLIM2 PDZ and LIM domain 2 (mystique)
PHACTR4 phosphatase and actin regulator 4
PIAS2 protein inhibitor of activated STAT, 2
PKM pyruvate kinase, muscle
PKN1 protein kinase N1
PKP3 plakophilin 3
PLEC plectin
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
PNKP polynucleotide kinase 3'-phosphatase
PTGES3 prostaglandin E synthase 3 (cytosolic)
PXN paxillin
PYGO2 pygopus family PHD finger 2
RASAL2 RAS protein activator like 2
RAVER1 ribonucleoprotein, PTB-binding 1
RBBP8 retinoblastoma binding protein 8
RBMX RNA binding motif protein, X-linked
RERE arginine-glutamic acid dipeptide (RE) repeats
RFX7 regulatory factor X, 7
RIOK1 RIO kinase 1
RNF20 ring finger protein 20, E3 ubiquitin protein ligase
RNPEP arginyl aminopeptidase (aminopeptidase B)
RP1 retinitis pigmentosa 1 (autosomal dominant)
RPLP1 ribosomal protein, large, P1
RRBP1 ribosome binding protein 1
RRM2 ribonucleotide reductase M2
RRP1B ribosomal RNA processing 1B
SAMD4A sterile alpha motif domain containing 4A
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae)
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SMG9 SMG9 nonsense mediated mRNA decay factor
SMN2 survival of motor neuron 2, centromeric
SMTN smoothelin
SORBS1 sorbin and SH3 domain containing 1
SORBS3 sorbin and SH3 domain containing 3
SPP1 secreted phosphoprotein 1
SPRY4 sprouty homolog 4 (Drosophila)
SPTBN1 spectrin, beta, non-erythrocytic 1
SQSTM1 sequestosome 1
STK10 serine/threonine kinase 10
STRIP1 striatin interacting protein 1
STRN3 striatin, calmodulin binding protein 3
TBC1D4 TBC1 domain family, member 4
TBC1D5 TBC1 domain family, member 5
TJAP1 tight junction associated protein 1 (peripheral)
TJP1 tight junction protein 1
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
TLE3 transducin-like enhancer of split 3
TLE4 transducin-like enhancer of split 4
TMPO thymopoietin
TNIK TRAF2 and NCK interacting kinase
TNKS1BP1 tankyrase 1 binding protein 1, 182kDa
UBE4B ubiquitination factor E4B
USP24 ubiquitin specific peptidase 24
WDR3 WD repeat domain 3
WDR44 WD repeat domain 44
WRNIP1 Werner helicase interacting protein 1
YBX1 Y box binding protein 1
ZNF169 zinc finger protein 169
ZNF185 zinc finger protein 185 (LIM domain)
ZNF609 zinc finger protein 609
ZRANB2 zinc finger, RAN-binding domain containing 2

decreased phosphorylation

Symbol Name
ACTA2 actin, alpha 2, smooth muscle, aorta
ADRM1 adhesion regulating molecule 1
AEBP1 AE binding protein 1
ANAPC2 anaphase promoting complex subunit 2
ATXN7L3 ataxin 7-like 3
BCL2L12 BCL2-like 12 (proline rich)
BRD1 bromodomain containing 1
C11ORF30 chromosome 11 open reading frame 30
C17ORF49 chromosome 17 open reading frame 49
C1ORF131 chromosome 1 open reading frame 131
C2CD3 C2 calcium-dependent domain containing 3
CCBL2 cysteine conjugate-beta lyase 2
CCDC137 coiled-coil domain containing 137
CCDC9 coiled-coil domain containing 9
CCNYL1 cyclin Y-like 1
CDC6 cell division cycle 6
CECR2 cat eye syndrome chromosome region, candidate 2
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3
CHD7 chromodomain helicase DNA binding protein 7
CLDN6 claudin 6
CPSF4 cleavage and polyadenylation specific factor 4, 30kDa
CSNK1A1 casein kinase 1, alpha 1
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
DBF4 DBF4 zinc finger
DDI2 DNA-damage inducible 1 homolog 2 (S. cerevisiae)
DGCR14 DiGeorge syndrome critical region gene 14
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29
DSG2 desmoglein 2
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2
EP300 E1A binding protein p300
FBXO28 F-box protein 28
FUBP1 far upstream element (FUSE) binding protein 1
GLTSCR1 glioma tumor suppressor candidate region gene 1
GOLGA4 golgin A4
GTF3C3 general transcription factor IIIC, polypeptide 3, 102kDa
KIAA1958 KIAA1958
KMT2D lysine (K)-specific methyltransferase 2D
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)
L1TD1 LINE-1 type transposase domain containing 1
LAS1L LAS1-like (S. cerevisiae)
LIN28A lin-28 homolog A (C. elegans)
LMNB2 lamin B2
LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4
LRWD1 leucine-rich repeats and WD repeat domain containing 1
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast)
MED30 mediator complex subunit 30
MEN1 multiple endocrine neoplasia I
MGA MGA, MAX dimerization protein
MSI1 musashi RNA-binding protein 1
NCAPD3 non-SMC condensin II complex, subunit D3
NDNL2 necdin-like 2
NOL6 nucleolar protein 6 (RNA-associated)
NONO non-POU domain containing, octamer-binding
NOP56P1 NOP56 ribonucleoprotein pseudogene 1
NSUN5 NOP2/Sun domain family, member 5
NUP155 nucleoporin 155kDa
NUP88 nucleoporin 88kDa
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PIF1 PIF1 5'-to-3' DNA helicase
POLR1D polymerase (RNA) I polypeptide D, 16kDa
PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1
PRDM14 PR domain containing 14
PSMA5 proteasome (prosome, macropain) subunit, alpha type, 5
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
PSPC1 paraspeckle component 1
RGPD6 RANBP2-like and GRIP domain containing 6
RNF169 ring finger protein 169
SALL2 spalt-like transcription factor 2
SAMD1 sterile alpha motif domain containing 1
SCML2 sex comb on midleg-like 2 (Drosophila)
SETDB1 SET domain, bifurcated 1
SMAD2 SMAD family member 2
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SOX15 SRY (sex determining region Y)-box 15
SOX2 SRY (sex determining region Y)-box 2
SP4 Sp4 transcription factor
STAU2 staufen double-stranded RNA binding protein 2
SURF6 surfeit 6
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TACC3 transforming, acidic coiled-coil containing protein 3
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TERF2IP telomeric repeat binding factor 2, interacting protein
TFPT TCF3 (E2A) fusion partner (in childhood Leukemia)
TOPORS topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
TP53 tumor protein p53
TRIM71 tripartite motif containing 71, E3 ubiquitin protein ligase
TRPT1 tRNA phosphotransferase 1
TSHZ3 teashirt zinc finger homeobox 3
USP7 ubiquitin specific peptidase 7 (herpes virus-associated)
WTAP Wilms tumor 1 associated protein
WWP2 WW domain containing E3 ubiquitin protein ligase 2
ZNF217 zinc finger protein 217
ZNF423 zinc finger protein 423
ZNF528 zinc finger protein 528
ZNF532 zinc finger protein 532