8-Hydroxyquinoline_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 8-Hydroxyquinoline perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 8-Hydroxyquinoline_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.139967
TGFBI transforming growth factor, beta-induced, 68kDa 0.0727494
NRXN3 neurexin 3 0.0577941
VCL vinculin 0.0546468
CDH13 cadherin 13 0.0510532
COL5A1 collagen, type V, alpha 1 0.0413526
PSD3 pleckstrin and Sec7 domain containing 3 0.0358579
GLIS3 GLIS family zinc finger 3 0.035628
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0355542
NAV1 neuron navigator 1 0.0349465
PRSS23 protease, serine, 23 0.0345393
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0335882
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.03261
EGFR epidermal growth factor receptor 0.0325914
RAD51B RAD51 paralog B 0.0316534
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0313915
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0313022
KMT2C lysine (K)-specific methyltransferase 2C 0.0290326
EXT1 exostosin glycosyltransferase 1 0.0285622
INTS6 integrator complex subunit 6 0.028079
ZSWIM6 zinc finger, SWIM-type containing 6 0.0279934
AKAP12 A kinase (PRKA) anchor protein 12 0.0273644
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.027047
TNS3 tensin 3 0.0251518
MBNL1 muscleblind-like splicing regulator 1 0.0251351
ZBTB20 zinc finger and BTB domain containing 20 0.0250825
HMGA2 high mobility group AT-hook 2 0.0249725
F3 coagulation factor III (thromboplastin, tissue factor) 0.0240992
KYNU kynureninase 0.0240918
OXR1 oxidation resistance 1 0.0240198
ERRFI1 ERBB receptor feedback inhibitor 1 0.0239642
DST dystonin 0.0238449
EFNA5 ephrin-A5 0.0229261
FN1 fibronectin 1 0.0228158
PRELID2 PRELI domain containing 2 0.0223237
FNIP1 folliculin interacting protein 1 0.0222268
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0222197
MACF1 microtubule-actin crosslinking factor 1 0.0219947
PICALM phosphatidylinositol binding clathrin assembly protein 0.0219314
RAI14 retinoic acid induced 14 0.0215338
CANX calnexin 0.0212357
GOLGB1 golgin B1 0.0211836
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0208778
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0207354
VEGFC vascular endothelial growth factor C 0.0203976
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0203819
MYH9 myosin, heavy chain 9, non-muscle 0.0202226
UTRN utrophin 0.0201649
ASPH aspartate beta-hydroxylase 0.020127
ZMYND8 zinc finger, MYND-type containing 8 0.0201208
FHIT fragile histidine triad 0.0197008
RUNX1 runt-related transcription factor 1 0.0192978
TTC3 tetratricopeptide repeat domain 3 0.0189992
DMTF1 cyclin D binding myb-like transcription factor 1 0.0189434
RRM2 ribonucleotide reductase M2 0.0186633
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0183611
SMC4 structural maintenance of chromosomes 4 0.0182433
COL7A1 collagen, type VII, alpha 1 0.018081
RIN2 Ras and Rab interactor 2 0.0176807
PTPRK protein tyrosine phosphatase, receptor type, K 0.0176631
RBMS1 RNA binding motif, single stranded interacting protein 1 0.0176021
TENT5A terminal nucleotidyltransferase 5A 0.0174631
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0173329
LPP LIM domain containing preferred translocation partner in lipoma 0.0170821
HM13 histocompatibility (minor) 13 0.0170815
FER fer (fps/fes related) tyrosine kinase 0.01696
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0168951
BIRC6 baculoviral IAP repeat containing 6 0.0167723
WLS wntless Wnt ligand secretion mediator 0.0166685
JPH2 junctophilin 2 0.0166465
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0164918
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0157785
SRBD1 S1 RNA binding domain 1 0.0156353
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0156055
SPDYA speedy/RINGO cell cycle regulator family member A 0.0154452
TRPC1 transient receptor potential cation channel, subfamily C, member 1 0.0154096
SBF2 SET binding factor 2 0.0154029
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0153477
LAMB1 laminin, beta 1 0.0153398
NCOR2 nuclear receptor corepressor 2 0.0153161
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0152656
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0151689
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0151288
AGO3 argonaute RISC catalytic component 3 0.0150315
MAGED1 melanoma antigen family D1 0.0149624
AOPEP aminopeptidase O (putative) 0.0149482
FMNL2 formin-like 2 0.0147296
PDLIM5 PDZ and LIM domain 5 0.0145495
GPATCH2L G patch domain containing 2-like 0.0145364
RPS12 ribosomal protein S12 0.0145096
VEGFA vascular endothelial growth factor A 0.0143976
DLG1 discs, large homolog 1 (Drosophila) 0.0143743
TRIP12 thyroid hormone receptor interactor 12 0.0143542
DPYSL2 dihydropyrimidinase-like 2 0.0142897
NBEAL1 neurobeachin-like 1 0.0142417
ITGB3BP integrin beta 3 binding protein (beta3-endonexin) 0.0142179
FRMD4A FERM domain containing 4A 0.0141217
YEATS2 YEATS domain containing 2 0.0140919
SAMD4A sterile alpha motif domain containing 4A 0.0140736
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0140443

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.199191
TMSB10 thymosin beta 10 -0.172427
MT2A metallothionein 2A -0.11744
UBC ubiquitin C -0.0861595
MT1X metallothionein 1X -0.0684481
COL1A2 collagen, type I, alpha 2 -0.0669303
SDC4 syndecan 4 -0.0602291
B2M beta-2-microglobulin -0.0574589
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.05608
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0491459
PDIA3 protein disulfide isomerase family A, member 3 -0.0486672
COL1A1 collagen, type I, alpha 1 -0.0477362
RTN4 reticulon 4 -0.0469824
TXNIP thioredoxin interacting protein -0.0469452
NAMPT nicotinamide phosphoribosyltransferase -0.046115
ENO1 enolase 1, (alpha) -0.0453128
GRB10 growth factor receptor-bound protein 10 -0.045189
SPAG9 sperm associated antigen 9 -0.0449135
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0434374
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0410371
PTMA prothymosin, alpha -0.0402902
POTEF POTE ankyrin domain family, member F -0.0394715
HLA-B major histocompatibility complex, class I, B -0.0378712
H3-3B H3.3 histone B -0.0376354
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0366918
VIM vimentin -0.0366125
EEF2 eukaryotic translation elongation factor 2 -0.0361536
COL5A2 collagen, type V, alpha 2 -0.0359062
ANXA5 annexin A5 -0.0353878
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0349401
IL6 interleukin 6 -0.0346698
WAC WW domain containing adaptor with coiled-coil -0.0341842
WTAP Wilms tumor 1 associated protein -0.0340765
JUN jun proto-oncogene -0.0321029
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0315221
FNDC3B fibronectin type III domain containing 3B -0.0312181
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0293832
RPL37A ribosomal protein L37a -0.0292035
TPT1 tumor protein, translationally-controlled 1 -0.0285594
FAM13A family with sequence similarity 13, member A -0.0283974
FLNA filamin A, alpha -0.028079
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0279919
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0279853
ZNF292 zinc finger protein 292 -0.0279546
KMT2E lysine (K)-specific methyltransferase 2E -0.02779
ZNF207 zinc finger protein 207 -0.0269858
TOP1 topoisomerase (DNA) I -0.0269475
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) -0.0268271
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0266722
BASP1 brain abundant, membrane attached signal protein 1 -0.0259707
FTL ferritin, light polypeptide -0.0258518
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0258459
SRRM2 serine/arginine repetitive matrix 2 -0.0255996
PRRC2C proline-rich coiled-coil 2C -0.0246356
LONP2 lon peptidase 2, peroxisomal -0.0241199
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0241142
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0240411
S100A10 S100 calcium binding protein A10 -0.0237616
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0237227
AKAP13 A kinase (PRKA) anchor protein 13 -0.0236361
RPL32 ribosomal protein L32 -0.0233477
MATR3 matrin 3 -0.0231921
ARRDC3 arrestin domain containing 3 -0.0229947
GAPVD1 GTPase activating protein and VPS9 domains 1 -0.0228817
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0225186
RIGI RNA sensor RIG-I -0.0223762
BSG basigin (Ok blood group) -0.022287
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0222448
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0221966
GANAB glucosidase, alpha; neutral AB -0.0219048
SOS2 son of sevenless homolog 2 (Drosophila) -0.0214177
RAB1A RAB1A, member RAS oncogene family -0.0212685
FLNB filamin B, beta -0.0212362
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0210226
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0209087
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0207614
SEC61G Sec61 gamma subunit -0.0206133
CCNI cyclin I -0.0204858
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0204567
DEK DEK proto-oncogene -0.0203282
ACVR1 activin A receptor, type I -0.0202801
UBE2H ubiquitin-conjugating enzyme E2H -0.0201954
SOD2 superoxide dismutase 2, mitochondrial -0.0198829
CUL4B cullin 4B -0.0198349
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0198296
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0197481
FYN FYN proto-oncogene, Src family tyrosine kinase -0.0194341
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0193926
MSANTD3 Myb/SANT-like DNA-binding domain containing 3 -0.0192303
S100A9 S100 calcium binding protein A9 -0.0190026
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0188113
THOC2 THO complex 2 -0.0188102
RPS4X ribosomal protein S4, X-linked -0.0186807
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0186343
ARL8B ADP-ribosylation factor-like 8B -0.018626
RLIM ring finger protein, LIM domain interacting -0.0185935
RSRC2 arginine/serine-rich coiled-coil 2 -0.018547
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0185408
DSCAM Down syndrome cell adhesion molecule -0.0184414
RPS27A ribosomal protein S27a -0.0184395