9-ING-41_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 9-ING-41 perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 9-ING-41_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.0967716
MKI67 marker of proliferation Ki-67 0.0803083
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0534396
TPT1 tumor protein, translationally-controlled 1 0.048768
PCDH7 protocadherin 7 0.0483216
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0443034
USP9X ubiquitin specific peptidase 9, X-linked 0.0418289
TRIO trio Rho guanine nucleotide exchange factor 0.0416728
RPS12 ribosomal protein S12 0.0416693
PDE4D phosphodiesterase 4D, cAMP-specific 0.041561
MYO9A myosin IXA 0.0410457
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0405138
OGA O-GlcNAcase 0.0399751
RPS2 ribosomal protein S2 0.0392092
PDE10A phosphodiesterase 10A 0.0387907
SQSTM1 sequestosome 1 0.0376652
HMGA2 high mobility group AT-hook 2 0.0375719
RPS6 ribosomal protein S6 0.0370761
IGF2 insulin-like growth factor 2 0.0370631
PRELID2 PRELI domain containing 2 0.0369149
SET SET nuclear proto-oncogene 0.036747
NAV2 neuron navigator 2 0.0352366
RPS8 ribosomal protein S8 0.0348094
EIF1 eukaryotic translation initiation factor 1 0.0313093
MT2A metallothionein 2A 0.0306856
FN1 fibronectin 1 0.0303403
TIAM2 T-cell lymphoma invasion and metastasis 2 0.0294982
TNS3 tensin 3 0.0293192
SCLT1 sodium channel and clathrin linker 1 0.0286048
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0285394
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0282828
SLC38A2 solute carrier family 38, member 2 0.0282151
RPL37A ribosomal protein L37a 0.0281807
AHNAK AHNAK nucleoprotein 0.0280415
RPL5 ribosomal protein L5 0.0271062
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0264742
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0263009
BCAS3 breast carcinoma amplified sequence 3 0.026195
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0259908
ARRDC3 arrestin domain containing 3 0.0258661
RPL26 ribosomal protein L26 0.0254583
RPS20 ribosomal protein S20 0.0249854
CKAP5 cytoskeleton associated protein 5 0.0243112
IER3 immediate early response 3 0.0241662
RPL7 ribosomal protein L7 0.023992
DOCK1 dedicator of cytokinesis 1 0.0233058
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.022849
CKAP2 cytoskeleton associated protein 2 0.0225955
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0223772
RAD51B RAD51 paralog B 0.0217683
MED13 mediator complex subunit 13 0.0217063
SFPQ splicing factor proline/glutamine-rich 0.0214183
VIM vimentin 0.0209551
ADM adrenomedullin 0.0205445
KANSL1L KAT8 regulatory NSL complex subunit 1-like 0.0203179
PRKN parkin RBR E3 ubiquitin protein ligase 0.0200103
CENPE centromere protein E, 312kDa 0.0199074
LMO7 LIM domain 7 0.0198634
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0198168
CNTRL centriolin 0.0196021
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0194194
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0193998
FNDC3A fibronectin type III domain containing 3A 0.0192912
HOXA3 homeobox A3 0.0191885
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.0189628
SAMD4A sterile alpha motif domain containing 4A 0.018962
TPX2 TPX2, microtubule-associated 0.0188795
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.018856
WDPCP WD repeat containing planar cell polarity effector 0.0187981
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0186405
CREBBP CREB binding protein 0.0185404
NIPBL Nipped-B homolog (Drosophila) 0.0182552
TSHZ2 teashirt zinc finger homeobox 2 0.0180971
EXOC6B exocyst complex component 6B 0.0179958
BPTF bromodomain PHD finger transcription factor 0.0179166
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.0178915
RPS27 ribosomal protein S27 0.0178766
RBMX RNA binding motif protein, X-linked 0.0177919
RPLP0 ribosomal protein, large, P0 0.0177578
DNAH14 dynein, axonemal, heavy chain 14 0.0176644
CCNI cyclin I 0.0175166
SMC6 structural maintenance of chromosomes 6 0.0174669
SERINC1 serine incorporator 1 0.0173664
CAND1 cullin-associated and neddylation-dissociated 1 0.0173615
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.017291
VMP1 vacuole membrane protein 1 0.0172248
COL5A2 collagen, type V, alpha 2 0.0171718
ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 0.0171307
FBN1 fibrillin 1 0.0170708
TACC3 transforming, acidic coiled-coil containing protein 3 0.0170626
N4BP2L2 NEDD4 binding protein 2-like 2 0.0169049
DCAF7 DDB1 and CUL4 associated factor 7 0.0168727
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0168412
SPAG9 sperm associated antigen 9 0.0167963
BRD8 bromodomain containing 8 0.0167866
DDX50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 0.0165614
SOS1 son of sevenless homolog 1 (Drosophila) 0.016389
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.0162914
ACYP2 acylphosphatase 2, muscle type 0.0162267
RACK1 receptor for activated C kinase 1 0.0160568

decreased expression

Symbol Name Standardized Value
MEST mesoderm specific transcript -0.2751
PEG10 paternally expressed 10 -0.226913
PRKG1 protein kinase, cGMP-dependent, type I -0.192282
CADM2 cell adhesion molecule 2 -0.168904
MGP matrix Gla protein -0.105059
ZEB1 zinc finger E-box binding homeobox 1 -0.104881
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0994886
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0987937
TPK1 thiamin pyrophosphokinase 1 -0.0962948
PTMA prothymosin, alpha -0.0958677
AFF4 AF4/FMR2 family, member 4 -0.0932563
MED13L mediator complex subunit 13-like -0.0846397
MEOX2 mesenchyme homeobox 2 -0.0808597
SEPTIN11 septin 11 -0.0791406
ZNF292 zinc finger protein 292 -0.0690574
QKI QKI, KH domain containing, RNA binding -0.0668124
NFIB nuclear factor I/B -0.0665083
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0662278
NFIA nuclear factor I/A -0.0644883
SRPK2 SRSF protein kinase 2 -0.0642345
KMT2C lysine (K)-specific methyltransferase 2C -0.0619759
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0601491
VEGFA vascular endothelial growth factor A -0.0596667
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0585413
COL1A2 collagen, type I, alpha 2 -0.0546023
KAZN kazrin, periplakin interacting protein -0.054431
TMSB10 thymosin beta 10 -0.0533381
KMT2E lysine (K)-specific methyltransferase 2E -0.0524631
MATR3 matrin 3 -0.0510171
LDHA lactate dehydrogenase A -0.0503372
SPPL3 signal peptide peptidase like 3 -0.0500088
FNDC3B fibronectin type III domain containing 3B -0.0493469
KDM5B lysine (K)-specific demethylase 5B -0.0486113
NCOR2 nuclear receptor corepressor 2 -0.0483206
SSBP2 single-stranded DNA binding protein 2 -0.0482917
PDGFC platelet derived growth factor C -0.0480392
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0464754
CANX calnexin -0.0456139
THSD4 thrombospondin, type I, domain containing 4 -0.0449345
TRERF1 transcriptional regulating factor 1 -0.0441687
ANKRD17 ankyrin repeat domain 17 -0.0434336
TTC3 tetratricopeptide repeat domain 3 -0.0434087
RAB7A RAB7A, member RAS oncogene family -0.0433985
GOLGA4 golgin A4 -0.0432737
ZFHX3 zinc finger homeobox 3 -0.0431992
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0416694
MAP1B microtubule-associated protein 1B -0.0406501
COTL1 coactosin-like F-actin binding protein 1 -0.0400903
RBM25 RNA binding motif protein 25 -0.0400902
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0398987
PDIA3 protein disulfide isomerase family A, member 3 -0.0397993
CALD1 caldesmon 1 -0.0397667
MSI2 musashi RNA-binding protein 2 -0.0396787
YBX1 Y box binding protein 1 -0.0389766
PLS3 plastin 3 -0.0384032
BTBD3 BTB (POZ) domain containing 3 -0.0375772
LCORL ligand dependent nuclear receptor corepressor-like -0.0367658
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0360906
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0360521
CTBP2 C-terminal binding protein 2 -0.0358597
DLG1 discs, large homolog 1 (Drosophila) -0.0358302
CALR calreticulin -0.0356443
IGF2R insulin-like growth factor 2 receptor -0.0355674
SREBF2 sterol regulatory element binding transcription factor 2 -0.0352499
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0349523
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0348617
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.0347428
PDS5B PDS5 cohesin associated factor B -0.0344479
PCM1 pericentriolar material 1 -0.0340896
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0339195
TM9SF3 transmembrane 9 superfamily member 3 -0.033832
BCOR BCL6 corepressor -0.0337078
PIAS2 protein inhibitor of activated STAT, 2 -0.0335377
ARHGAP12 Rho GTPase activating protein 12 -0.0333247
DIPK2A divergent protein kinase domain 2A -0.0333048
RREB1 ras responsive element binding protein 1 -0.033281
BSG basigin (Ok blood group) -0.0331275
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0331186
RNF145 ring finger protein 145 -0.0329207
TNIP1 TNFAIP3 interacting protein 1 -0.0327767
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0327456
CSDE1 cold shock domain containing E1, RNA-binding -0.0327075
PRRC2B proline-rich coiled-coil 2B -0.0324207
RPS24 ribosomal protein S24 -0.0320065
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0318179
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0316384
NBEA neurobeachin -0.0310486
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0309747
POU2F1 POU class 2 homeobox 1 -0.030869
RFX7 regulatory factor X, 7 -0.030546
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0301093
ZMIZ1 zinc finger, MIZ-type containing 1 -0.0297966
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0294031
HDLBP high density lipoprotein binding protein -0.0293755
GSPT1 G1 to S phase transition 1 -0.0291546
S100A9 S100 calcium binding protein A9 -0.0288694
BMPR1A bone morphogenetic protein receptor, type IA -0.0285677
GSE1 Gse1 coiled-coil protein -0.0285604
FBXO11 F-box protein 11 -0.0281503
SBF2 SET binding factor 2 -0.0278063