9-ING-41_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description 9-ING-41 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the 9-ING-41_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.143711
HDAC9 histone deacetylase 9 0.128674
RPS12 ribosomal protein S12 0.123083
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.102892
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.102671
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.082555
NAV2 neuron navigator 2 0.074217
RPL37A ribosomal protein L37a 0.0737938
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0623185
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0581445
CD44 CD44 molecule (Indian blood group) 0.0579248
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.057531
HLA-B major histocompatibility complex, class I, B 0.056535
ATXN1 ataxin 1 0.0544411
RPS6 ribosomal protein S6 0.0528014
SQSTM1 sequestosome 1 0.0507765
B2M beta-2-microglobulin 0.0505784
ENO1 enolase 1, (alpha) 0.0504567
RPS3 ribosomal protein S3 0.049303
KYNU kynureninase 0.0489092
STC1 stanniocalcin 1 0.0473822
NDRG1 N-myc downstream regulated 1 0.0469976
RPS23 ribosomal protein S23 0.0466496
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0442865
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0441449
RPS17 ribosomal protein S17 0.0436984
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0430856
IFI6 interferon, alpha-inducible protein 6 0.0423731
LDHA lactate dehydrogenase A 0.0423731
ZSWIM6 zinc finger, SWIM-type containing 6 0.0417538
MX1 MX dynamin-like GTPase 1 0.0416135
EEF2 eukaryotic translation elongation factor 2 0.0412047
VCL vinculin 0.0404365
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0385657
JMJD1C jumonji domain containing 1C 0.0380823
BICC1 BicC family RNA binding protein 1 0.0379173
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0377259
EIF1 eukaryotic translation initiation factor 1 0.0375529
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0371858
GOLGB1 golgin B1 0.0370783
ZBTB38 zinc finger and BTB domain containing 38 0.0369788
RPS2 ribosomal protein S2 0.0352401
RPL9 ribosomal protein L9 0.0350401
FNDC3B fibronectin type III domain containing 3B 0.0342753
SLC38A2 solute carrier family 38, member 2 0.0332487
IFITM3 interferon induced transmembrane protein 3 0.0329368
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0326601
VCAN versican 0.0325643
FNIP1 folliculin interacting protein 1 0.0316545
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0314094
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0306497
ARRDC3 arrestin domain containing 3 0.0304188
IFI16 interferon, gamma-inducible protein 16 0.0302059
C6ORF62 chromosome 6 open reading frame 62 0.0301186
RUNX1 runt-related transcription factor 1 0.0301155
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0300622
RPLP2 ribosomal protein, large, P2 0.0299897
RPS8 ribosomal protein S8 0.02966
PLSCR1 phospholipid scramblase 1 0.0291808
CDCP1 CUB domain containing protein 1 0.0288817
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0287168
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0286105
RIGI RNA sensor RIG-I 0.0285207
ZHX2 zinc fingers and homeoboxes 2 0.0283883
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0282889
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0282668
RND3 Rho family GTPase 3 0.0280893
BPTF bromodomain PHD finger transcription factor 0.0279994
RPS10 ribosomal protein S10 0.0272992
NAV1 neuron navigator 1 0.0272763
RNF213 ring finger protein 213 0.0271342
MKI67 marker of proliferation Ki-67 0.0265369
APLP2 amyloid beta (A4) precursor-like protein 2 0.0264906
EXT1 exostosin glycosyltransferase 1 0.026437
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0255765
RPS29 ribosomal protein S29 0.0255157
LOC102724023 ES1 protein homolog, mitochondrial 0.0253859
PRELID2 PRELI domain containing 2 0.0250517
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0250241
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0249878
SMYD3 SET and MYND domain containing 3 0.0247473
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0245288
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0243812
RPL26 ribosomal protein L26 0.0242343
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0242093
ZBTB20 zinc finger and BTB domain containing 20 0.0241757
RPS15 ribosomal protein S15 0.0241449
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 0.0241405
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0235823
NT5E 5'-nucleotidase, ecto (CD73) 0.023422
TRIO trio Rho guanine nucleotide exchange factor 0.0233715
LPP LIM domain containing preferred translocation partner in lipoma 0.0233079
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa 0.0232512
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0231268
FBXL7 F-box and leucine-rich repeat protein 7 0.0231255
N4BP2L2 NEDD4 binding protein 2-like 2 0.0231186
COL8A1 collagen, type VIII, alpha 1 0.0231086
SDK1 sidekick cell adhesion molecule 1 0.0229132
ASPH aspartate beta-hydroxylase 0.0227127
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0225827

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.128641
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.107239
PTMA prothymosin, alpha -0.102066
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0856482
CADM1 cell adhesion molecule 1 -0.0799372
IER3 immediate early response 3 -0.0739252
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0685101
PGK1 phosphoglycerate kinase 1 -0.0660183
UGCG UDP-glucose ceramide glucosyltransferase -0.065085
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.064899
FTL ferritin, light polypeptide -0.0647873
KDM3A lysine (K)-specific demethylase 3A -0.0610988
ATP13A3 ATPase type 13A3 -0.0609325
SFRP1 secreted frizzled-related protein 1 -0.0586234
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0584927
ELL2 elongation factor, RNA polymerase II, 2 -0.056991
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0564606
ZFAND3 zinc finger, AN1-type domain 3 -0.0559975
FTH1 ferritin, heavy polypeptide 1 -0.053926
FRMD4A FERM domain containing 4A -0.0537418
RPS24 ribosomal protein S24 -0.0517751
TSC22D2 TSC22 domain family, member 2 -0.0510955
IGFBP3 insulin-like growth factor binding protein 3 -0.0494826
TMSB4X thymosin beta 4, X-linked -0.0487063
NPEPPS aminopeptidase puromycin sensitive -0.0482861
WSB1 WD repeat and SOCS box containing 1 -0.047562
QKI QKI, KH domain containing, RNA binding -0.0463592
GOLGA4 golgin A4 -0.0448682
HELZ helicase with zinc finger -0.0448451
RLF rearranged L-myc fusion -0.0440844
NAP1L1 nucleosome assembly protein 1-like 1 -0.0428447
MYH9 myosin, heavy chain 9, non-muscle -0.0426468
GNAS GNAS complex locus -0.042523
WTAP Wilms tumor 1 associated protein -0.0421555
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0418589
OGA O-GlcNAcase -0.0416566
NT5C2 5'-nucleotidase, cytosolic II -0.0394837
SDC4 syndecan 4 -0.0390895
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0367094
ZMYND8 zinc finger, MYND-type containing 8 -0.0364162
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0361944
TPM4 tropomyosin 4 -0.035504
RBM39 RNA binding motif protein 39 -0.0353049
COL1A1 collagen, type I, alpha 1 -0.0351408
YBX1 Y box binding protein 1 -0.034477
MARCHF6 membrane associated ring-CH-type finger 6 -0.0344595
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0341041
POTEF POTE ankyrin domain family, member F -0.0340347
RAB1A RAB1A, member RAS oncogene family -0.0336625
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0332914
ZNF292 zinc finger protein 292 -0.0332532
TMEM123 transmembrane protein 123 -0.0330353
CTSD cathepsin D -0.0327217
CAVIN1 caveolae associated protein 1 -0.03232
MXI1 MAX interactor 1, dimerization protein -0.0322466
EPS8 epidermal growth factor receptor pathway substrate 8 -0.032164
WAC WW domain containing adaptor with coiled-coil -0.0320489
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.031855
SPAG9 sperm associated antigen 9 -0.031669
CALR calreticulin -0.031304
USP3 ubiquitin specific peptidase 3 -0.0312424
CANX calnexin -0.0309835
ICAM1 intercellular adhesion molecule 1 -0.0306494
TPT1 tumor protein, translationally-controlled 1 -0.0304632
MATR3 matrin 3 -0.0302752
COL1A2 collagen, type I, alpha 2 -0.0301368
KPNB1 karyopherin (importin) beta 1 -0.0299713
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0297914
TFG TRK-fused gene -0.0297842
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0294039
TKT transketolase -0.0293394
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.028214
HDLBP high density lipoprotein binding protein -0.0278768
WDR45B WD repeat domain 45B -0.0277495
ANXA2 annexin A2 -0.0277125
RPLP0 ribosomal protein, large, P0 -0.0276455
DEK DEK proto-oncogene -0.0262617
SRGN serglycin -0.0262273
NAMPT nicotinamide phosphoribosyltransferase -0.0260864
CLINT1 clathrin interactor 1 -0.0253388
RAD21 RAD21 homolog (S. pombe) -0.0252033
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0249196
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0247897
TEX10 testis expressed 10 -0.0244498
FAM162A family with sequence similarity 162, member A -0.024333
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0242809
GARS1 glycyl-tRNA synthetase 1 -0.0242684
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0238546
RPS21 ribosomal protein S21 -0.0238323
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0238298
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.02382
SOD2 superoxide dismutase 2, mitochondrial -0.0236238
RPLP1 ribosomal protein, large, P1 -0.0235064
VIM vimentin -0.023487
RBM3 RNA binding motif (RNP1, RRM) protein 3 -0.0233751
PUM2 pumilio RNA-binding family member 2 -0.0233546
SEPTIN7 septin 7 -0.0233479
ZNF207 zinc finger protein 207 -0.0232667
TMEM263 transmembrane protein 263 -0.0227559
UVRAG UV radiation resistance associated -0.0227136