APTO-253_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description APTO-253 perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the APTO-253_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0863518
TRIO trio Rho guanine nucleotide exchange factor 0.085868
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0797705
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0685316
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0578064
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0576142
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0572678
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0555737
POTEF POTE ankyrin domain family, member F 0.0482216
COL8A1 collagen, type VIII, alpha 1 0.0474287
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0469901
CALR calreticulin 0.0428356
MAP1B microtubule-associated protein 1B 0.0426951
PRELID2 PRELI domain containing 2 0.0356396
HDAC9 histone deacetylase 9 0.0350537
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0343401
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0324642
LDHA lactate dehydrogenase A 0.0314187
DST dystonin 0.03089
MBNL2 muscleblind-like splicing regulator 2 0.0308206
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0307795
FNDC3B fibronectin type III domain containing 3B 0.0294246
KIFAP3 kinesin-associated protein 3 0.0279395
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0271583
SP100 SP100 nuclear antigen 0.0256695
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0253837
CD44 CD44 molecule (Indian blood group) 0.0253032
FBXL7 F-box and leucine-rich repeat protein 7 0.0252012
TPM3 tropomyosin 3 0.0240483
VEGFC vascular endothelial growth factor C 0.0240024
PICALM phosphatidylinositol binding clathrin assembly protein 0.023822
NEK7 NIMA-related kinase 7 0.0238098
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0237822
TLE4 transducin-like enhancer of split 4 0.0236636
ZBTB20 zinc finger and BTB domain containing 20 0.0234995
VCL vinculin 0.0221058
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0217821
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.0217453
LMNA lamin A/C 0.0216062
SON SON DNA binding protein 0.021292
MT1X metallothionein 1X 0.0211197
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0208548
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0205759
LIMCH1 LIM and calponin homology domains 1 0.0204163
TXNRD1 thioredoxin reductase 1 0.0202631
FBN1 fibrillin 1 0.0202323
IFI16 interferon, gamma-inducible protein 16 0.0200439
PFN1 profilin 1 0.0192593
ENO1 enolase 1, (alpha) 0.0188637
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 0.0183832
PDIA6 protein disulfide isomerase family A, member 6 0.0183095
MB21D2 Mab-21 domain containing 2 0.0182871
RUNX1 runt-related transcription factor 1 0.0182596
RHOBTB3 Rho-related BTB domain containing 3 0.0182409
SDK1 sidekick cell adhesion molecule 1 0.0180829
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.017905
ZFP36L1 ZFP36 ring finger protein-like 1 0.017574
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0174005
TENM3 teneurin transmembrane protein 3 0.0173229
PDE4D phosphodiesterase 4D, cAMP-specific 0.0173162
DPYSL3 dihydropyrimidinase-like 3 0.0171732
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0168119
MSN moesin 0.0160748
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0159836
HSPB1 heat shock 27kDa protein 1 0.0155936
ARL15 ADP-ribosylation factor-like 15 0.015533
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0153462
IQGAP1 IQ motif containing GTPase activating protein 1 0.0152619
INSIG2 insulin induced gene 2 0.0151465
DIAPH3 diaphanous-related formin 3 0.0150529
SMC4 structural maintenance of chromosomes 4 0.0150255
MEIS2 Meis homeobox 2 0.0148458
ATAD2 ATPase family, AAA domain containing 2 0.0145481
MMP12 matrix metallopeptidase 12 0.0145153
CLU clusterin 0.0143105
FER fer (fps/fes related) tyrosine kinase 0.0141804
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.0140167
OR51B5 olfactory receptor, family 51, subfamily B, member 5 0.013876
SOD2 superoxide dismutase 2, mitochondrial 0.0138555
ERCC6L2 excision repair cross-complementation group 6-like 2 0.0137874
KDM4C lysine (K)-specific demethylase 4C 0.0137159
SUCNR1 succinate receptor 1 0.0135876
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0134448
PSD3 pleckstrin and Sec7 domain containing 3 0.0133952
MBNL1 muscleblind-like splicing regulator 1 0.013373
EXT1 exostosin glycosyltransferase 1 0.0132317
PCDH7 protocadherin 7 0.0130443
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0130442
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0126975
HELZ helicase with zinc finger 0.0125575
UBA6 ubiquitin-like modifier activating enzyme 6 0.0124898
HILPDA hypoxia inducible lipid droplet-associated 0.012429
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0124072
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0123492
BSG basigin (Ok blood group) 0.0123419
ALCAM activated leukocyte cell adhesion molecule 0.0123373
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0122843
RRM2 ribonucleotide reductase M2 0.0122332
NFIX nuclear factor I/X (CCAAT-binding transcription factor) 0.0121961
CXXC5 CXXC finger protein 5 0.012162

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.248233
PODXL podocalyxin-like -0.144101
CDH13 cadherin 13 -0.129229
PLAT plasminogen activator, tissue -0.108821
AKAP12 A kinase (PRKA) anchor protein 12 -0.0934258
IGFBP3 insulin-like growth factor binding protein 3 -0.0783673
ABI3BP ABI family, member 3 (NESH) binding protein -0.0697557
CSTB cystatin B (stefin B) -0.0642185
TPT1 tumor protein, translationally-controlled 1 -0.0504571
LOXL2 lysyl oxidase-like 2 -0.0488926
SLC39A11 solute carrier family 39, member 11 -0.0483897
THBS2 thrombospondin 2 -0.047973
SLC38A1 solute carrier family 38, member 1 -0.0479454
HLA-B major histocompatibility complex, class I, B -0.0478355
NAV1 neuron navigator 1 -0.0471236
AHNAK AHNAK nucleoprotein -0.0453821
CCND1 cyclin D1 -0.0444597
EIF1 eukaryotic translation initiation factor 1 -0.0438673
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0425881
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0394654
COL5A1 collagen, type V, alpha 1 -0.0376917
ANKRD11 ankyrin repeat domain 11 -0.0369684
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0368008
FLT1 fms-related tyrosine kinase 1 -0.0352588
RPL37A ribosomal protein L37a -0.0349656
FN1 fibronectin 1 -0.0336563
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0333997
DKK3 dickkopf WNT signaling pathway inhibitor 3 -0.0332066
RPS6 ribosomal protein S6 -0.0315956
RPL35A ribosomal protein L35a -0.0315005
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0302762
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0300797
PRSS23 protease, serine, 23 -0.0298587
SH3KBP1 SH3-domain kinase binding protein 1 -0.0284745
SEPTIN9 septin 9 -0.028407
KRT81 keratin 81, type II -0.0282019
CAVIN1 caveolae associated protein 1 -0.0281415
FLNB filamin B, beta -0.0278466
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0271302
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0270736
RPLP2 ribosomal protein, large, P2 -0.0270344
RPL31 ribosomal protein L31 -0.0254743
RPS27A ribosomal protein S27a -0.0252716
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0252701
EGFR epidermal growth factor receptor -0.0251755
S100A6 S100 calcium binding protein A6 -0.0248597
RPS8 ribosomal protein S8 -0.0248253
CTSB cathepsin B -0.0242733
EFNA5 ephrin-A5 -0.0242224
MT2A metallothionein 2A -0.0239603
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0237562
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0235079
SLFN5 schlafen family member 5 -0.0234522
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 -0.0233096
SORBS2 sorbin and SH3 domain containing 2 -0.0231553
IFITM1 interferon induced transmembrane protein 1 -0.0219853
ZNF217 zinc finger protein 217 -0.0219147
S100A11 S100 calcium binding protein A11 -0.0213949
RPL37 ribosomal protein L37 -0.0213918
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0213412
FTL ferritin, light polypeptide -0.020983
RPL12 ribosomal protein L12 -0.0201703
GARS1 glycyl-tRNA synthetase 1 -0.0200648
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0198676
TNS3 tensin 3 -0.0198387
NDRG1 N-myc downstream regulated 1 -0.0198006
CLIP2 CAP-GLY domain containing linker protein 2 -0.0197549
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0196357
RASA3 RAS p21 protein activator 3 -0.0196258
RTN4 reticulon 4 -0.0196126
NFE2L1 nuclear factor, erythroid 2-like 1 -0.0192895
DGKG diacylglycerol kinase, gamma 90kDa -0.0192763
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.0190737
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0190465
AHNAK2 AHNAK nucleoprotein 2 -0.0190422
RPS3 ribosomal protein S3 -0.0190003
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0189505
RPS13 ribosomal protein S13 -0.0185833
NIBAN1 niban apoptosis regulator 1 -0.0184735
CYTH3 cytohesin 3 -0.0183786
RAI14 retinoic acid induced 14 -0.0180557
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0179325
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0179134
IFITM3 interferon induced transmembrane protein 3 -0.0178102
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa -0.0176503
RPL38 ribosomal protein L38 -0.0175721
WWTR1 WW domain containing transcription regulator 1 -0.0175628
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0174775
RACK1 receptor for activated C kinase 1 -0.0174469
TTC3 tetratricopeptide repeat domain 3 -0.0173422
PLXNA2 plexin A2 -0.0171964
FAM107B family with sequence similarity 107, member B -0.0171166
RPL23 ribosomal protein L23 -0.0171056
CD59 CD59 molecule, complement regulatory protein -0.0170904
GLIS3 GLIS family zinc finger 3 -0.0170546
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0170215
LTBP1 latent transforming growth factor beta binding protein 1 -0.0170193
RPS11 ribosomal protein S11 -0.0169053
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0168759
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0167831