APTO-253_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description APTO-253 perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the APTO-253_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.118583
PDE10A phosphodiesterase 10A 0.0900204
EFNA5 ephrin-A5 0.0753884
THSD4 thrombospondin, type I, domain containing 4 0.0648914
KYNU kynureninase 0.048827
ARHGAP26 Rho GTPase activating protein 26 0.0466291
SMAD3 SMAD family member 3 0.0447624
CMIP c-Maf inducing protein 0.0379271
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0371464
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0370807
OSMR oncostatin M receptor 0.035257
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0314048
MCL1 myeloid cell leukemia 1 0.0306442
EGFR epidermal growth factor receptor 0.0283983
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0279215
NRIP1 nuclear receptor interacting protein 1 0.0279043
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0270865
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0265602
BMAL2 basic helix-loop-helix ARNT like 2 0.0261965
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0246185
SMYD3 SET and MYND domain containing 3 0.0243289
CEMIP cell migration inducing protein, hyaluronan binding 0.0241314
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0234238
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0233419
ZSWIM6 zinc finger, SWIM-type containing 6 0.0231718
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0228512
DOCK4 dedicator of cytokinesis 4 0.0221384
SLC35F3 solute carrier family 35, member F3 0.0209587
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0207046
EPAS1 endothelial PAS domain protein 1 0.0203436
GLIS3 GLIS family zinc finger 3 0.0187374
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0184947
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0182859
TGM2 transglutaminase 2 0.0182341
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0178414
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0178093
SAMD4A sterile alpha motif domain containing 4A 0.017723
ANO6 anoctamin 6 0.0174627
NCEH1 neutral cholesterol ester hydrolase 1 0.0174254
AKAP13 A kinase (PRKA) anchor protein 13 0.0171909
FAT1 FAT atypical cadherin 1 0.0168627
GRAMD1B GRAM domain containing 1B 0.0164157
CYFIP1 cytoplasmic FMR1 interacting protein 1 0.0162343
MAML3 mastermind-like 3 (Drosophila) 0.016003
TDRD7 tudor domain containing 7 0.0159055
GRB10 growth factor receptor-bound protein 10 0.0153867
DOCK5 dedicator of cytokinesis 5 0.0153321
ETNK1 ethanolamine kinase 1 0.0153303
HSPA8 heat shock 70kDa protein 8 0.0151172
MYO9A myosin IXA 0.0147528
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0147389
TRAPPC9 trafficking protein particle complex 9 0.0145574
ZC3H12C zinc finger CCCH-type containing 12C 0.0144364
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0143053
FNDC3B fibronectin type III domain containing 3B 0.0141608
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0141502
EXT1 exostosin glycosyltransferase 1 0.0141307
WWOX WW domain containing oxidoreductase 0.0140168
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0135986
HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 0.0135888
RAD51B RAD51 paralog B 0.0135786
BMP6 bone morphogenetic protein 6 0.0135514
CSNK1A1 casein kinase 1, alpha 1 0.0134403
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0132832
RIGI RNA sensor RIG-I 0.0131517
EEF2 eukaryotic translation elongation factor 2 0.0131453
PLSCR1 phospholipid scramblase 1 0.0129596
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0128883
SETX senataxin 0.0128444
RUNX1 runt-related transcription factor 1 0.0128403
GPATCH2L G patch domain containing 2-like 0.0128345
KIRREL3 kin of IRRE like 3 (Drosophila) 0.012824
TUT7 terminal uridylyl transferase 7 0.0128174
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0127737
TAS2R14 taste receptor, type 2, member 14 0.0127222
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0127179
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0126464
MAMLD1 mastermind-like domain containing 1 0.0125424
DSCAM Down syndrome cell adhesion molecule 0.0125025
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0124673
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.012435
DST dystonin 0.0123853
EXOC6B exocyst complex component 6B 0.012338
SGMS1 sphingomyelin synthase 1 0.0123236
PRKN parkin RBR E3 ubiquitin protein ligase 0.0123086
PLEC plectin 0.0120812
MYO1E myosin IE 0.012063
LAMC2 laminin, gamma 2 0.0119568
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0119459
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0118575
CEMIP2 cell migration inducing hyaluronidase 2 0.0116915
HDAC8 histone deacetylase 8 0.0116647
CLTC clathrin, heavy chain (Hc) 0.011612
KIAA1217 KIAA1217 0.0116002
JAG1 jagged 1 0.0115402
HMGA2 high mobility group AT-hook 2 0.0114331
VCL vinculin 0.0111686
TRIM25 tripartite motif containing 25 0.0110956
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0110913
JMJD1C jumonji domain containing 1C 0.0110815

decreased expression

Symbol Name Standardized Value
FTL ferritin, light polypeptide -0.194458
TMSB10 thymosin beta 10 -0.187884
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.161674
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.14297
PTMA prothymosin, alpha -0.137927
MT2A metallothionein 2A -0.119039
VIM vimentin -0.110177
RPS6 ribosomal protein S6 -0.108495
RPS19 ribosomal protein S19 -0.105599
USP3 ubiquitin specific peptidase 3 -0.0942081
TPT1 tumor protein, translationally-controlled 1 -0.08386
MT1X metallothionein 1X -0.0827049
ACTG1 actin gamma 1 -0.0786992
RPLP1 ribosomal protein, large, P1 -0.0774685
EIF1 eukaryotic translation initiation factor 1 -0.0746529
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0702451
KCTD9 potassium channel tetramerization domain containing 9 -0.064142
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0601886
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0601781
IGFBP4 insulin-like growth factor binding protein 4 -0.059749
GOLGA4 golgin A4 -0.058887
RPL23 ribosomal protein L23 -0.0549894
HELZ helicase with zinc finger -0.054907
SPAG9 sperm associated antigen 9 -0.0544267
S100A10 S100 calcium binding protein A10 -0.053132
PFN1 profilin 1 -0.0529707
RPL19 ribosomal protein L19 -0.0518679
RPS8 ribosomal protein S8 -0.0506646
NAP1L1 nucleosome assembly protein 1-like 1 -0.0497138
KRT81 keratin 81, type II -0.049501
RPL12 ribosomal protein L12 -0.0491135
AKR1C2 aldo-keto reductase family 1, member C2 -0.0489527
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0481016
KDM3A lysine (K)-specific demethylase 3A -0.0480479
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0475958
RPS24 ribosomal protein S24 -0.046107
TKT transketolase -0.0460136
S100A6 S100 calcium binding protein A6 -0.0455525
RPL35A ribosomal protein L35a -0.0454207
BASP1 brain abundant, membrane attached signal protein 1 -0.0451631
RPS16 ribosomal protein S16 -0.0451114
CANX calnexin -0.0441707
NDRG1 N-myc downstream regulated 1 -0.0436694
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0434093
PGK1 phosphoglycerate kinase 1 -0.0426391
RPLP0 ribosomal protein, large, P0 -0.0421605
VDAC1 voltage-dependent anion channel 1 -0.041916
NAMPT nicotinamide phosphoribosyltransferase -0.0417908
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0407458
WDR45B WD repeat domain 45B -0.0400063
RPS3 ribosomal protein S3 -0.0389583
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0377749
IGFBP3 insulin-like growth factor binding protein 3 -0.0374344
WSB1 WD repeat and SOCS box containing 1 -0.0370615
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0368469
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0364752
RPL26 ribosomal protein L26 -0.0363365
ANKRD11 ankyrin repeat domain 11 -0.0355269
RPS27A ribosomal protein S27a -0.0353653
RPL8 ribosomal protein L8 -0.0351557
RPS13 ribosomal protein S13 -0.0348708
PRRC2C proline-rich coiled-coil 2C -0.0345427
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0344116
WAC WW domain containing adaptor with coiled-coil -0.0339582
NPEPPS aminopeptidase puromycin sensitive -0.0329936
UBC ubiquitin C -0.0327596
FMNL2 formin-like 2 -0.0327146
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0325721
PKM pyruvate kinase, muscle -0.0323052
NUP58 nucleoporin 58 -0.0318688
SEPTIN7 septin 7 -0.0314154
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0313281
SLC38A1 solute carrier family 38, member 1 -0.0313112
C15ORF48 chromosome 15 open reading frame 48 -0.0310829
AKAP12 A kinase (PRKA) anchor protein 12 -0.03062
RPS5 ribosomal protein S5 -0.0306109
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0303366
HMGA1 high mobility group AT-hook 1 -0.0300679
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0297844
RPL31 ribosomal protein L31 -0.0297285
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0296305
RPL28 ribosomal protein L28 -0.0291886
PTBP3 polypyrimidine tract binding protein 3 -0.0290962
FBL fibrillarin -0.0283625
RPLP2 ribosomal protein, large, P2 -0.0283192
TPI1 triosephosphate isomerase 1 -0.0281323
VEZT vezatin, adherens junctions transmembrane protein -0.0279639
RAB1A RAB1A, member RAS oncogene family -0.0278762
LMNA lamin A/C -0.0278084
RPS11 ribosomal protein S11 -0.0277374
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0276042
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0276041
ADM adrenomedullin -0.0275764
TRA2A transformer 2 alpha homolog (Drosophila) -0.0275556
RPL37A ribosomal protein L37a -0.0274903
RPL32 ribosomal protein L32 -0.0272985
KLF6 Kruppel-like factor 6 -0.0272977
POTEF POTE ankyrin domain family, member F -0.0272894
RSL1D1 ribosomal L1 domain containing 1 -0.0271076
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0269914