APTO-253_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description APTO-253 perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the APTO-253_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CP ceruloplasmin (ferroxidase) 0.117191
MT2A metallothionein 2A 0.109262
APOL1 apolipoprotein L, 1 0.098823
EFNA5 ephrin-A5 0.0985547
MAML2 mastermind-like 2 (Drosophila) 0.095459
RAD51B RAD51 paralog B 0.0903507
SAMD4A sterile alpha motif domain containing 4A 0.0763036
RNF213 ring finger protein 213 0.0669581
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0668013
IFI27 interferon, alpha-inducible protein 27 0.0648911
LCN2 lipocalin 2 0.0634868
TGM2 transglutaminase 2 0.0629764
IGFBP3 insulin-like growth factor binding protein 3 0.0625647
ZSWIM6 zinc finger, SWIM-type containing 6 0.0582581
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0576388
NRG3 neuregulin 3 0.0534432
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0529582
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0528738
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0526266
ENO1 enolase 1, (alpha) 0.052323
B2M beta-2-microglobulin 0.050549
DOCK5 dedicator of cytokinesis 5 0.0502511
FNDC3B fibronectin type III domain containing 3B 0.0498908
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0480824
MX1 MX dynamin-like GTPase 1 0.0435285
ARHGAP26 Rho GTPase activating protein 26 0.0433226
PCDH7 protocadherin 7 0.0427745
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0425502
ADAM28 ADAM metallopeptidase domain 28 0.0421506
IFI6 interferon, alpha-inducible protein 6 0.042146
ALCAM activated leukocyte cell adhesion molecule 0.040376
CATSPERB catsper channel auxiliary subunit beta 0.0403206
SP100 SP100 nuclear antigen 0.0400972
MX2 MX dynamin-like GTPase 2 0.0393227
HDAC9 histone deacetylase 9 0.039243
EGR1 early growth response 1 0.0391737
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0391492
LPP LIM domain containing preferred translocation partner in lipoma 0.0386389
TMC5 transmembrane channel-like 5 0.0384459
ZBTB20 zinc finger and BTB domain containing 20 0.0382023
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0368477
EXT1 exostosin glycosyltransferase 1 0.036232
PLAT plasminogen activator, tissue 0.0357419
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0354203
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.034995
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0343949
CMIP c-Maf inducing protein 0.0343469
KRT19 keratin 19, type I 0.0330914
HLA-B major histocompatibility complex, class I, B 0.032764
ISG15 ISG15 ubiquitin-like modifier 0.0324944
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0323988
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 0.0321818
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0320885
PDE4D phosphodiesterase 4D, cAMP-specific 0.0320806
APLP2 amyloid beta (A4) precursor-like protein 2 0.0312431
C3 complement component 3 0.0312312
NABP1 nucleic acid binding protein 1 0.0309405
ATXN1 ataxin 1 0.0302706
PMP22 peripheral myelin protein 22 0.0301272
RSAD2 radical S-adenosyl methionine domain containing 2 0.0290869
ZFP36L1 ZFP36 ring finger protein-like 1 0.028822
IFI44L interferon-induced protein 44-like 0.0271899
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0270158
PKM pyruvate kinase, muscle 0.0264637
KYNU kynureninase 0.0261506
ANXA4 annexin A4 0.0260118
TBC1D22A TBC1 domain family, member 22A 0.0259786
EGFR epidermal growth factor receptor 0.0256685
ZMYND8 zinc finger, MYND-type containing 8 0.0254042
DNAH11 dynein, axonemal, heavy chain 11 0.024925
BPTF bromodomain PHD finger transcription factor 0.0246231
CFB complement factor B 0.0245217
MCL1 myeloid cell leukemia 1 0.024477
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0242599
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0240892
MBD5 methyl-CpG binding domain protein 5 0.0237606
IFITM1 interferon induced transmembrane protein 1 0.0237503
CEMIP cell migration inducing protein, hyaluronan binding 0.0237496
CFLAR CASP8 and FADD-like apoptosis regulator 0.0233985
INTS6 integrator complex subunit 6 0.0231533
NPAS2 neuronal PAS domain protein 2 0.0231335
SMAD3 SMAD family member 3 0.0229446
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0229229
RIGI RNA sensor RIG-I 0.0228183
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0226509
IRAK3 interleukin-1 receptor-associated kinase 3 0.0220852
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0219326
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0218098
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 0.021777
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0217225
EHBP1 EH domain binding protein 1 0.0217225
LOC102724023 ES1 protein homolog, mitochondrial 0.0213337
BABAM2 BRISC and BRCA1 A complex member 2 0.0212728
SAMD9 sterile alpha motif domain containing 9 0.0211685
CNRIP1 cannabinoid receptor interacting protein 1 0.0208993
NCKAP5 NCK-associated protein 5 0.0208488
TXNIP thioredoxin interacting protein 0.0207799
EXOC4 exocyst complex component 4 0.0207764
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0206245
MYO1E myosin IE 0.0205781

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.145082
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.121255
NAMPT nicotinamide phosphoribosyltransferase -0.116108
SPAG9 sperm associated antigen 9 -0.110651
TSC22D2 TSC22 domain family, member 2 -0.104859
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0880642
PLAU plasminogen activator, urokinase -0.0776745
EIF1 eukaryotic translation initiation factor 1 -0.0762421
RBM39 RNA binding motif protein 39 -0.0719957
ACTG1 actin gamma 1 -0.0694122
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0677042
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0676246
PTMA prothymosin, alpha -0.0653927
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0637657
ANXA2 annexin A2 -0.0635784
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0627874
PGK1 phosphoglycerate kinase 1 -0.0604939
RTN4 reticulon 4 -0.0603184
RAB1A RAB1A, member RAS oncogene family -0.0602959
LOC112694756 uncharaterized LOC112694756 -0.0564372
OGA O-GlcNAcase -0.0564341
NPEPPS aminopeptidase puromycin sensitive -0.0561322
TMSB4X thymosin beta 4, X-linked -0.0557671
ELL2 elongation factor, RNA polymerase II, 2 -0.055641
FAM13A family with sequence similarity 13, member A -0.0547119
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.052163
WSB1 WD repeat and SOCS box containing 1 -0.0508999
KDM3A lysine (K)-specific demethylase 3A -0.050028
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0476465
RLF rearranged L-myc fusion -0.0475678
UBC ubiquitin C -0.0465888
KMT2E lysine (K)-specific methyltransferase 2E -0.0454336
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0451294
MARCHF6 membrane associated ring-CH-type finger 6 -0.0429129
TOP1 topoisomerase (DNA) I -0.0424791
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0420972
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0415674
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0407836
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0404688
CANX calnexin -0.040389
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0401551
LAMB3 laminin, beta 3 -0.0396638
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0395851
ABI1 abl-interactor 1 -0.0395736
FNBP1L formin binding protein 1-like -0.0393883
CDC73 cell division cycle 73 -0.0392376
AFF4 AF4/FMR2 family, member 4 -0.0390908
HELZ helicase with zinc finger -0.0385148
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0373066
ATP11B ATPase, class VI, type 11B -0.0371747
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0368601
PDIA3 protein disulfide isomerase family A, member 3 -0.0364035
PNPLA8 patatin-like phospholipase domain containing 8 -0.0362202
EZR ezrin -0.0358477
HMGA1 high mobility group AT-hook 1 -0.03557
KDM5B lysine (K)-specific demethylase 5B -0.0353146
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0350583
ADAM9 ADAM metallopeptidase domain 9 -0.0348571
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0347413
TFG TRK-fused gene -0.0345473
EREG epiregulin -0.0345162
USP3 ubiquitin specific peptidase 3 -0.0344892
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0343433
FAM162A family with sequence similarity 162, member A -0.0342778
MATR3 matrin 3 -0.0342574
NEK7 NIMA-related kinase 7 -0.0341824
MCTP1 multiple C2 domains, transmembrane 1 -0.0341282
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0335665
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0331682
SUCO SUN domain containing ossification factor -0.0325921
NUP58 nucleoporin 58 -0.0325837
WAC WW domain containing adaptor with coiled-coil -0.0324295
RAB6A RAB6A, member RAS oncogene family -0.0324074
TMEM123 transmembrane protein 123 -0.0321372
GARS1 glycyl-tRNA synthetase 1 -0.0318742
PLAUR plasminogen activator, urokinase receptor -0.03186
YTHDC1 YTH domain containing 1 -0.0318122
FLNB filamin B, beta -0.0317569
TMSB10 thymosin beta 10 -0.0316275
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0315844
RASA2 RAS p21 protein activator 2 -0.0313049
OSBPL9 oxysterol binding protein-like 9 -0.0311864
SEC23A Sec23 homolog A (S. cerevisiae) -0.030757
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0305132
KLF6 Kruppel-like factor 6 -0.030474
CCNL1 cyclin L1 -0.0301719
MORF4L2 mortality factor 4 like 2 -0.0301204
ZNF292 zinc finger protein 292 -0.0300812
CCNY cyclin Y -0.0297934
LDHA lactate dehydrogenase A -0.0296565
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0293404
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0292338
TRA2A transformer 2 alpha homolog (Drosophila) -0.0290742
IRF6 interferon regulatory factor 6 -0.0289097
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0286754
AHNAK AHNAK nucleoprotein -0.0286598
F3 coagulation factor III (thromboplastin, tissue factor) -0.0285822
USP9X ubiquitin specific peptidase 9, X-linked -0.0284656
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 -0.0284419
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0284362