APTO-253_HCT15 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description APTO-253 perturbation in HCT15 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the APTO-253_HCT15 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.164999
INTS6 integrator complex subunit 6 0.0495773
MKI67 marker of proliferation Ki-67 0.0332917
WWOX WW domain containing oxidoreductase 0.0330658
VCL vinculin 0.0314479
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0266967
ZSWIM6 zinc finger, SWIM-type containing 6 0.0257866
APLP2 amyloid beta (A4) precursor-like protein 2 0.0256312
LRRC23 leucine rich repeat containing 23 0.0239936
H1-0 H1.0 linker histone 0.0225611
FHIT fragile histidine triad 0.0221583
HOMER1 homer scaffolding protein 1 0.021961
CEMIP2 cell migration inducing hyaluronidase 2 0.0215903
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0215389
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0206124
PPP1R13B protein phosphatase 1, regulatory subunit 13B 0.0203789
LOC102724023 ES1 protein homolog, mitochondrial 0.0200804
MACROD2 MACRO domain containing 2 0.018435
RRM2 ribonucleotide reductase M2 0.0183443
ADD3 adducin 3 (gamma) 0.0182456
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0177431
EGR1 early growth response 1 0.0177036
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0175124
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.017081
AEBP2 AE binding protein 2 0.0170442
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0159715
FAT1 FAT atypical cadherin 1 0.0159359
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0158699
HSPH1 heat shock 105kDa/110kDa protein 1 0.0157228
GPC5 glypican 5 0.0152745
NFIA nuclear factor I/A 0.0151097
KDM3B lysine (K)-specific demethylase 3B 0.0148246
SCAPER S-phase cyclin A-associated protein in the ER 0.0146686
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0146249
CBX5 chromobox homolog 5 0.014606
CENPF centromere protein F, 350/400kDa 0.014392
HSPA8 heat shock 70kDa protein 8 0.0143395
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0142479
H1-4 H1.4 linker histone, cluster member 0.0142131
BRD2 bromodomain containing 2 0.0141909
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.0139718
DSPP dentin sialophosphoprotein 0.0135451
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0134945
HELLS helicase, lymphoid-specific 0.0134773
CCDC146 coiled-coil domain containing 146 0.0133491
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0132768
GPHN gephyrin 0.012972
EHBP1 EH domain binding protein 1 0.0128568
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0127692
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.01256
TOB2 transducer of ERBB2, 2 0.0124521
DOCK1 dedicator of cytokinesis 1 0.0122718
PATJ PATJ crumbs cell polarity complex component 0.012261
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0122123
MSI2 musashi RNA-binding protein 2 0.0120816
GLCCI1 glucocorticoid induced 1 0.011995
WWC2 WW and C2 domain containing 2 0.0119625
CFAP44 cilia and flagella associated protein 44 0.0116782
IFIH1 interferon induced with helicase C domain 1 0.0116557
INO80 INO80 complex subunit 0.0116434
EXT1 exostosin glycosyltransferase 1 0.0115756
POLN polymerase (DNA directed) nu 0.0114166
TGFB1 transforming growth factor, beta 1 0.0112775
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0112106
EIF5B eukaryotic translation initiation factor 5B 0.0111902
SUMF1 sulfatase modifying factor 1 0.0110951
HMGB1 high mobility group box 1 0.0110033
MYO1E myosin IE 0.0109772
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0109634
GCH1 GTP cyclohydrolase 1 0.0109468
RGS6 regulator of G-protein signaling 6 0.0109453
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0109278
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0108859
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0107894
MORC4 MORC family CW-type zinc finger 4 0.0107582
TRIM72 tripartite motif containing 72, E3 ubiquitin protein ligase 0.0107217
FTO fat mass and obesity associated 0.0106267
KLHL29 kelch-like family member 29 0.0105813
ATF3 activating transcription factor 3 0.0105273
FUS FUS RNA binding protein 0.0105222
FAM222A family with sequence similarity 222, member A 0.0104355
H1-2 H1.2 linker histone, cluster member 0.0103428
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0103317
PCM1 pericentriolar material 1 0.0102807
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) 0.0102776
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0102299
TXNDC16 thioredoxin domain containing 16 0.0100939
TNRC6B trinucleotide repeat containing 6B 0.0100575
BZW2 basic leucine zipper and W2 domains 2 0.0100014
IL6ST interleukin 6 signal transducer 0.00997554
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 0.00995402
PRKCA protein kinase C, alpha 0.00991933
TACC1 transforming, acidic coiled-coil containing protein 1 0.00990289
KAZN kazrin, periplakin interacting protein 0.00990206
BBS9 Bardet-Biedl syndrome 9 0.00986691
MPHOSPH8 M-phase phosphoprotein 8 0.00983599
STAT1 signal transducer and activator of transcription 1, 91kDa 0.00976728
MEIS2 Meis homeobox 2 0.00970346
SYNE2 spectrin repeat containing, nuclear envelope 2 0.00967482
CADPS Ca++-dependent secretion activator 0.00958769

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.211517
AHNAK AHNAK nucleoprotein -0.111806
NDRG1 N-myc downstream regulated 1 -0.0912096
TPT1 tumor protein, translationally-controlled 1 -0.0863723
TPM4 tropomyosin 4 -0.0824996
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0767081
TMSB10 thymosin beta 10 -0.0715519
MT2A metallothionein 2A -0.0707929
UBC ubiquitin C -0.0603778
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0551692
LOC112694756 uncharaterized LOC112694756 -0.055142
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0546267
EEF2 eukaryotic translation elongation factor 2 -0.0503553
PCBP2 poly(rC) binding protein 2 -0.0473586
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0466208
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0455229
RPS27A ribosomal protein S27a -0.0435693
HMGA1 high mobility group AT-hook 1 -0.0415003
RPS3 ribosomal protein S3 -0.0414726
MYH9 myosin, heavy chain 9, non-muscle -0.0411868
ANKRD11 ankyrin repeat domain 11 -0.0409115
PLAUR plasminogen activator, urokinase receptor -0.0385451
EIF1 eukaryotic translation initiation factor 1 -0.0383719
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0381931
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0370164
SDC4 syndecan 4 -0.0365945
DDIT4 DNA-damage-inducible transcript 4 -0.0350024
S100A10 S100 calcium binding protein A10 -0.0332242
LDHA lactate dehydrogenase A -0.0331174
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0328158
RPL11 ribosomal protein L11 -0.032733
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0327288
COPB1 coatomer protein complex, subunit beta 1 -0.0323418
WSB1 WD repeat and SOCS box containing 1 -0.0322618
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0319621
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0312739
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0306197
SEC31A SEC31 homolog A (S. cerevisiae) -0.0303472
NF1 neurofibromin 1 -0.0303113
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0301495
ARF4 ADP-ribosylation factor 4 -0.0300827
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0296965
FTL ferritin, light polypeptide -0.0294513
BTBD9 BTB (POZ) domain containing 9 -0.029377
GOLGA4 golgin A4 -0.0291013
ANXA2 annexin A2 -0.0289146
SLC38A1 solute carrier family 38, member 1 -0.0288638
GLG1 golgi glycoprotein 1 -0.0283757
RPS25 ribosomal protein S25 -0.0280882
CDCP1 CUB domain containing protein 1 -0.0280498
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0279587
ZFAND3 zinc finger, AN1-type domain 3 -0.0277408
ENO1 enolase 1, (alpha) -0.0274236
S100A6 S100 calcium binding protein A6 -0.0273354
TM9SF3 transmembrane 9 superfamily member 3 -0.0267549
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0263502
OGA O-GlcNAcase -0.0261644
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0259099
RPS12 ribosomal protein S12 -0.0256423
CANX calnexin -0.0255852
COPA coatomer protein complex, subunit alpha -0.025578
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0254199
GARS1 glycyl-tRNA synthetase 1 -0.0253758
MCL1 myeloid cell leukemia 1 -0.0251546
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0246331
BIRC6 baculoviral IAP repeat containing 6 -0.0245698
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0243871
TBC1D22A TBC1 domain family, member 22A -0.024219
FLNB filamin B, beta -0.0240468
RPL26 ribosomal protein L26 -0.0236213
SRP54 signal recognition particle 54kDa -0.0236196
RPS19 ribosomal protein S19 -0.0235065
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0234288
CAPN2 calpain 2, (m/II) large subunit -0.0232463
SUCO SUN domain containing ossification factor -0.0230464
AKAP12 A kinase (PRKA) anchor protein 12 -0.0229724
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.022958
ZNF654 zinc finger protein 654 -0.0229369
VMP1 vacuole membrane protein 1 -0.0227673
CD2AP CD2-associated protein -0.0227316
MARCHF6 membrane associated ring-CH-type finger 6 -0.0227091
SETD5 SET domain containing 5 -0.0223401
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0221613
TMEM41B transmembrane protein 41B -0.0221494
EPN2 epsin 2 -0.0220657
KRT18 keratin 18, type I -0.0220568
ZNF207 zinc finger protein 207 -0.0220517
RPL30 ribosomal protein L30 -0.0218889
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0218451
RPS13 ribosomal protein S13 -0.0216049
CSDE1 cold shock domain containing E1, RNA-binding -0.0213258
RPL12 ribosomal protein L12 -0.0212852
RPS23 ribosomal protein S23 -0.0212526
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.02125
RRBP1 ribosome binding protein 1 -0.0209681
DSCAM Down syndrome cell adhesion molecule -0.0208929
HMGA2 high mobility group AT-hook 2 -0.0207637
KDM3A lysine (K)-specific demethylase 3A -0.0205735
RPS8 ribosomal protein S8 -0.0205233
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0204727