APTO-253_HEC-1-A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description APTO-253 perturbation in HEC-1-A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the APTO-253_HEC-1-A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.146798
PRELID2 PRELI domain containing 2 0.0768894
MACROD2 MACRO domain containing 2 0.0689914
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0665506
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0631384
ZBTB20 zinc finger and BTB domain containing 20 0.0541595
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0500821
RAD51B RAD51 paralog B 0.050033
MKI67 marker of proliferation Ki-67 0.0469714
DIAPH3 diaphanous-related formin 3 0.0414891
FHIT fragile histidine triad 0.0413659
WWOX WW domain containing oxidoreductase 0.0382218
MT2A metallothionein 2A 0.0381998
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0362369
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0353267
VCL vinculin 0.0352524
SVIL supervillin 0.0344201
TBC1D5 TBC1 domain family, member 5 0.0333108
RHEX regulator of hemoglobinization and erythroid cell expansion 0.0330584
PSD3 pleckstrin and Sec7 domain containing 3 0.0328752
ALCAM activated leukocyte cell adhesion molecule 0.0322245
ATXN1 ataxin 1 0.0320985
BPTF bromodomain PHD finger transcription factor 0.03195
EGR1 early growth response 1 0.0317236
SMC4 structural maintenance of chromosomes 4 0.0313496
ITGB8 integrin, beta 8 0.0303672
BBS9 Bardet-Biedl syndrome 9 0.0300809
TXNRD1 thioredoxin reductase 1 0.0288774
MACC1 metastasis associated in colon cancer 1 0.0287129
RFC3 replication factor C (activator 1) 3, 38kDa 0.0287109
PATJ PATJ crumbs cell polarity complex component 0.0280947
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0278365
CBX5 chromobox homolog 5 0.0269819
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.025926
NFIB nuclear factor I/B 0.0254155
SMC1A structural maintenance of chromosomes 1A 0.0249949
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0248087
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0246038
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0244411
ASPH aspartate beta-hydroxylase 0.024155
RPS19 ribosomal protein S19 0.0229367
POTEF POTE ankyrin domain family, member F 0.0228628
RUNX1 runt-related transcription factor 1 0.0227314
NSRP1 nuclear speckle splicing regulatory protein 1 0.0226536
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0223365
MT1X metallothionein 1X 0.0220072
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0219221
CENPF centromere protein F, 350/400kDa 0.0218447
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0217387
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0211722
FER fer (fps/fes related) tyrosine kinase 0.0211402
UBXN4 UBX domain protein 4 0.0209372
SMYD3 SET and MYND domain containing 3 0.0208405
TUBB4B tubulin, beta 4B class IVb 0.0197462
TJP1 tight junction protein 1 0.0193733
MYO9A myosin IXA 0.0191414
SCAPER S-phase cyclin A-associated protein in the ER 0.0189783
CEP128 centrosomal protein 128kDa 0.0187635
ANLN anillin, actin binding protein 0.0186789
TPI1 triosephosphate isomerase 1 0.0185105
CBX3 chromobox homolog 3 0.0185001
PDE4D phosphodiesterase 4D, cAMP-specific 0.018446
PTPRK protein tyrosine phosphatase, receptor type, K 0.0182544
ZNF652 zinc finger protein 652 0.0181231
EXOC4 exocyst complex component 4 0.018081
CREB5 cAMP responsive element binding protein 5 0.0180336
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0180128
PFN1 profilin 1 0.0177562
LIMCH1 LIM and calponin homology domains 1 0.0176251
BBX bobby sox homolog (Drosophila) 0.01739
MBD5 methyl-CpG binding domain protein 5 0.0171772
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0171647
PARD3B par-3 family cell polarity regulator beta 0.0171347
LPP LIM domain containing preferred translocation partner in lipoma 0.0167948
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0167404
SKAP2 src kinase associated phosphoprotein 2 0.0166424
SPAG16 sperm associated antigen 16 0.016543
PCED1B PC-esterase domain containing 1B 0.0165368
ZRANB3 zinc finger, RAN-binding domain containing 3 0.0157177
STS steroid sulfatase (microsomal), isozyme S 0.0155779
ATG7 autophagy related 7 0.0155521
PCLO piccolo presynaptic cytomatrix protein 0.0155435
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0155384
CFAP44 cilia and flagella associated protein 44 0.0154455
SUMF1 sulfatase modifying factor 1 0.0154142
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0153921
ZFP36L1 ZFP36 ring finger protein-like 1 0.0151951
HELLS helicase, lymphoid-specific 0.0151718
METTL15 methyltransferase like 15 0.0151202
KIAA1328 KIAA1328 0.0150905
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0150491
APOLD1 apolipoprotein L domain containing 1 0.0150419
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0149969
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 0.0149954
NCEH1 neutral cholesterol ester hydrolase 1 0.0149875
ENO2 enolase 2 (gamma, neuronal) 0.0149015
RNF213 ring finger protein 213 0.0148285
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0147653
BCL2L1 BCL2-like 1 0.0146035
PAX8 paired box 8 0.0145635

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.139281
APP amyloid beta (A4) precursor protein -0.087263
TPT1 tumor protein, translationally-controlled 1 -0.0744623
AHNAK AHNAK nucleoprotein -0.0710409
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0651969
KDM3A lysine (K)-specific demethylase 3A -0.0635912
LAMB3 laminin, beta 3 -0.0598929
ANXA2 annexin A2 -0.0557347
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0543564
FLNB filamin B, beta -0.0498958
TMSB4X thymosin beta 4, X-linked -0.049414
PTMA prothymosin, alpha -0.0494018
KRT7 keratin 7, type II -0.047848
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0468891
RPS27A ribosomal protein S27a -0.0467151
MATR3 matrin 3 -0.0462841
ZNF292 zinc finger protein 292 -0.0459755
GOLGA4 golgin A4 -0.0449618
RLF rearranged L-myc fusion -0.0449582
UBC ubiquitin C -0.0443495
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0442518
FNBP1L formin binding protein 1-like -0.0438955
CANX calnexin -0.0426692
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0418674
UPP1 uridine phosphorylase 1 -0.0415801
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0405421
ACTG1 actin gamma 1 -0.0403525
SBF2 SET binding factor 2 -0.0400357
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0394148
HELZ helicase with zinc finger -0.039304
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0370337
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0356982
NPEPPS aminopeptidase puromycin sensitive -0.035651
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0354347
WAC WW domain containing adaptor with coiled-coil -0.0346454
KMT2E lysine (K)-specific methyltransferase 2E -0.0342133
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0339524
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0332589
ARID4B AT rich interactive domain 4B (RBP1-like) -0.032909
IARS1 isoleucyl-tRNA synthetase 1 -0.0328461
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0326059
EMP1 epithelial membrane protein 1 -0.0325822
EIF1 eukaryotic translation initiation factor 1 -0.0323816
RPS8 ribosomal protein S8 -0.0321433
OGA O-GlcNAcase -0.0320388
BHLHE40 basic helix-loop-helix family, member e40 -0.0318058
CLINT1 clathrin interactor 1 -0.0316517
EEF2 eukaryotic translation elongation factor 2 -0.031523
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0310586
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0309972
PUM1 pumilio RNA-binding family member 1 -0.0303883
ANKRD11 ankyrin repeat domain 11 -0.0302773
RSL1D1 ribosomal L1 domain containing 1 -0.030211
MARCHF6 membrane associated ring-CH-type finger 6 -0.0298445
NAP1L1 nucleosome assembly protein 1-like 1 -0.0293885
FBXL2 F-box and leucine-rich repeat protein 2 -0.0293821
RNF145 ring finger protein 145 -0.0292336
ZFAND3 zinc finger, AN1-type domain 3 -0.0291922
RACK1 receptor for activated C kinase 1 -0.0289784
CALR calreticulin -0.0289708
CLIP2 CAP-GLY domain containing linker protein 2 -0.0289217
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0289038
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0288887
DDIT4 DNA-damage-inducible transcript 4 -0.028511
GARS1 glycyl-tRNA synthetase 1 -0.0284109
ORC4 origin recognition complex, subunit 4 -0.0283103
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0280691
AFDN afadin, adherens junction formation factor -0.0280538
USP3 ubiquitin specific peptidase 3 -0.0280232
TRA2A transformer 2 alpha homolog (Drosophila) -0.0276039
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.027603
UBE2E1 ubiquitin-conjugating enzyme E2E 1 -0.0275934
RYBP RING1 and YY1 binding protein -0.0271496
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0270588
JMJD1C jumonji domain containing 1C -0.0270564
RAB1A RAB1A, member RAS oncogene family -0.0270115
SLMAP sarcolemma associated protein -0.0268885
BRWD1 bromodomain and WD repeat domain containing 1 -0.0268088
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0267553
ANKRD10 ankyrin repeat domain 10 -0.0266306
KMT2C lysine (K)-specific methyltransferase 2C -0.026626
NCKAP1 NCK-associated protein 1 -0.0264981
LMAN1 lectin, mannose-binding, 1 -0.0263977
LCORL ligand dependent nuclear receptor corepressor-like -0.0263889
AUH AU RNA binding protein/enoyl-CoA hydratase -0.0263651
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0263503
RPS3 ribosomal protein S3 -0.0262148
SQSTM1 sequestosome 1 -0.0260402
QKI QKI, KH domain containing, RNA binding -0.0259734
RYK receptor-like tyrosine kinase -0.0259692
AFF4 AF4/FMR2 family, member 4 -0.0259655
RPL12 ribosomal protein L12 -0.0258023
MED13 mediator complex subunit 13 -0.0253765
HDLBP high density lipoprotein binding protein -0.0251453
RPL23 ribosomal protein L23 -0.0249998
TOP2B topoisomerase (DNA) II beta 180kDa -0.0249917
SMG7 SMG7 nonsense mediated mRNA decay factor -0.0247767
TFG TRK-fused gene -0.0246367
ANKRD28 ankyrin repeat domain 28 -0.024411
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0243485