APTO-253_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description APTO-253 perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the APTO-253_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FNDC3B fibronectin type III domain containing 3B 0.0769585
PDE4D phosphodiesterase 4D, cAMP-specific 0.0735503
FN1 fibronectin 1 0.0665479
LOX lysyl oxidase 0.0590103
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0382119
DPYD dihydropyrimidine dehydrogenase 0.0379425
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0362966
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0352438
AADAC arylacetamide deacetylase 0.035193
IFI44L interferon-induced protein 44-like 0.0335786
FTH1 ferritin, heavy polypeptide 1 0.0333719
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0325637
ZSWIM6 zinc finger, SWIM-type containing 6 0.0323483
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0317999
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0317583
CD44 CD44 molecule (Indian blood group) 0.0302996
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0296959
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0288124
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0286313
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0273206
STAT1 signal transducer and activator of transcription 1, 91kDa 0.026737
MEF2A myocyte enhancer factor 2A 0.0260043
PTPRB protein tyrosine phosphatase, receptor type, B 0.0241415
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.023358
SAMD9 sterile alpha motif domain containing 9 0.0230952
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0229325
CLIC4 chloride intracellular channel 4 0.0227632
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.022758
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0222266
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0222106
LOC102724023 ES1 protein homolog, mitochondrial 0.0220418
TNNC1 troponin C type 1 (slow) 0.0216998
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0216165
H1-0 H1.0 linker histone 0.0210819
SOD2 superoxide dismutase 2, mitochondrial 0.0208127
S100A6 S100 calcium binding protein A6 0.020761
PNRC1 proline-rich nuclear receptor coactivator 1 0.0205763
LRMDA leucine rich melanocyte differentiation associated 0.020071
ZFP36L1 ZFP36 ring finger protein-like 1 0.0195636
RAD51B RAD51 paralog B 0.019373
IQGAP1 IQ motif containing GTPase activating protein 1 0.0192168
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0190118
TMSB10 thymosin beta 10 0.0190067
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0189142
GLIS3 GLIS family zinc finger 3 0.0183374
LGALS3 lectin, galactoside-binding, soluble, 3 0.0172855
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0170777
SP100 SP100 nuclear antigen 0.0170671
TXNRD1 thioredoxin reductase 1 0.0169755
PLIN2 perilipin 2 0.0167209
WDPCP WD repeat containing planar cell polarity effector 0.0164262
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0162304
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.0160698
BCAS3 breast carcinoma amplified sequence 3 0.0160066
FBN1 fibrillin 1 0.0159011
HDAC4 histone deacetylase 4 0.015722
PTMA prothymosin, alpha 0.0157209
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0155852
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0154555
NTN4 netrin 4 0.01538
DLG1 discs, large homolog 1 (Drosophila) 0.0152282
MAML3 mastermind-like 3 (Drosophila) 0.0151563
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0151065
MYADM myeloid-associated differentiation marker 0.015061
IL6ST interleukin 6 signal transducer 0.0148571
MBD5 methyl-CpG binding domain protein 5 0.014808
IFI16 interferon, gamma-inducible protein 16 0.0145685
TRIO trio Rho guanine nucleotide exchange factor 0.0145451
OXR1 oxidation resistance 1 0.0143636
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.0143276
PRELID2 PRELI domain containing 2 0.0143268
ARL4C ADP-ribosylation factor-like 4C 0.0143051
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.014292
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0141886
IFIH1 interferon induced with helicase C domain 1 0.014148
ASPH aspartate beta-hydroxylase 0.014092
LIMCH1 LIM and calponin homology domains 1 0.0140861
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0138937
EIF3B eukaryotic translation initiation factor 3, subunit B 0.0138292
ANKRD12 ankyrin repeat domain 12 0.0137421
HAS2 hyaluronan synthase 2 0.013683
DCN decorin 0.0135763
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0135653
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0135235
CCDC80 coiled-coil domain containing 80 0.0131628
MT1X metallothionein 1X 0.0131187
C1R complement component 1, r subcomponent 0.012991
TMOD3 tropomodulin 3 (ubiquitous) 0.0128697
KYNU kynureninase 0.0128186
SON SON DNA binding protein 0.0127957
RHOBTB3 Rho-related BTB domain containing 3 0.0127449
RNF24 ring finger protein 24 0.012528
DST dystonin 0.0124965
TXNIP thioredoxin interacting protein 0.0121505
HM13 histocompatibility (minor) 13 0.0120699
KSR1 kinase suppressor of ras 1 0.012003
SUMF1 sulfatase modifying factor 1 0.0119777
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0119762
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.01186
TIMP3 TIMP metallopeptidase inhibitor 3 0.011846

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.127764
VIM vimentin -0.0987162
CDH13 cadherin 13 -0.0886731
MT2A metallothionein 2A -0.0730555
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0713606
NRP1 neuropilin 1 -0.0667037
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0650293
EIF1 eukaryotic translation initiation factor 1 -0.0643073
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0615107
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0579803
STC1 stanniocalcin 1 -0.0563323
NAMPT nicotinamide phosphoribosyltransferase -0.0554974
RPS12 ribosomal protein S12 -0.0554163
RPL37A ribosomal protein L37a -0.047051
RPS29 ribosomal protein S29 -0.0459729
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0458808
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0444886
RPS6 ribosomal protein S6 -0.0433558
MTSS1 metastasis suppressor 1 -0.0424058
CDCP1 CUB domain containing protein 1 -0.0396565
RPS3 ribosomal protein S3 -0.0370712
CLMP CXADR-like membrane protein -0.0363116
HMGA2 high mobility group AT-hook 2 -0.0346997
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0342187
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0339991
FTL ferritin, light polypeptide -0.0329461
RPL31 ribosomal protein L31 -0.0328117
RAI14 retinoic acid induced 14 -0.0323039
RERE arginine-glutamic acid dipeptide (RE) repeats -0.032199
TFPI2 tissue factor pathway inhibitor 2 -0.0316813
JMJD1C jumonji domain containing 1C -0.0312406
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0311296
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0309652
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.030751
ANTXR2 anthrax toxin receptor 2 -0.0302757
ZEB1 zinc finger E-box binding homeobox 1 -0.030195
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.029819
ARHGAP5 Rho GTPase activating protein 5 -0.0297424
PDGFA platelet-derived growth factor alpha polypeptide -0.0296684
FAM107B family with sequence similarity 107, member B -0.0293865
RPS13 ribosomal protein S13 -0.0290907
RBM39 RNA binding motif protein 39 -0.0286846
FBXL13 F-box and leucine-rich repeat protein 13 -0.0285392
EGFR epidermal growth factor receptor -0.0285064
WWTR1 WW domain containing transcription regulator 1 -0.0285035
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0281788
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.028141
PARD3 par-3 family cell polarity regulator -0.0279768
BMAL2 basic helix-loop-helix ARNT like 2 -0.0279256
RPS25 ribosomal protein S25 -0.0277598
BASP1 brain abundant, membrane attached signal protein 1 -0.0277374
SYT1 synaptotagmin I -0.0276274
RPL35A ribosomal protein L35a -0.0272369
SH3RF3 SH3 domain containing ring finger 3 -0.0272067
RPL28 ribosomal protein L28 -0.0271919
FMNL2 formin-like 2 -0.0271271
SEPTIN9 septin 9 -0.026463
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0260063
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0251608
RPL5 ribosomal protein L5 -0.0251241
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0248808
RPS8 ribosomal protein S8 -0.0245728
MECOM MDS1 and EVI1 complex locus -0.0245347
PYGL phosphorylase, glycogen, liver -0.0242621
RPL13A ribosomal protein L13a -0.0241172
RPL38 ribosomal protein L38 -0.0240522
RPL19 ribosomal protein L19 -0.0238078
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 -0.0232998
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0231756
AKAP13 A kinase (PRKA) anchor protein 13 -0.0229995
RACK1 receptor for activated C kinase 1 -0.0227207
KMT2C lysine (K)-specific methyltransferase 2C -0.0224156
SETD5 SET domain containing 5 -0.0223989
BMERB1 bMERB domain containing 1 -0.0222254
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0213801
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0211714
RUNX1 runt-related transcription factor 1 -0.021073
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0210554
RPL37 ribosomal protein L37 -0.0209671
RPS21 ribosomal protein S21 -0.0209034
RPL11 ribosomal protein L11 -0.0207155
RPL23 ribosomal protein L23 -0.0207064
GLCCI1 glucocorticoid induced 1 -0.0206306
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0205148
RIOK3 RIO kinase 3 -0.0203962
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0202836
ANXA2 annexin A2 -0.0202026
TBL1X transducin (beta)-like 1X-linked -0.0200818
PRSS3 protease, serine, 3 -0.0198915
RPL9 ribosomal protein L9 -0.0196209
IL1B interleukin 1, beta -0.0195332
DUSP5 dual specificity phosphatase 5 -0.0194712
LTBP1 latent transforming growth factor beta binding protein 1 -0.0194309
PHIP pleckstrin homology domain interacting protein -0.0192626
ARHGAP21 Rho GTPase activating protein 21 -0.0191987
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6 -0.0190946
FOXO3 forkhead box O3 -0.0189957
SENP6 SUMO1/sentrin specific peptidase 6 -0.0186497
HIP1 huntingtin interacting protein 1 -0.0186435
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 -0.0186364